Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF475 and GFF476 are separated by 119 nucleotides GFF476 and GFF477 are separated by 93 nucleotides
GFF475 - Phosphate-specific transport system accessory protein PhoU, at 522,253 to 523,014
GFF475
GFF476 - Phosphate import ATP-binding protein PstB, at 523,134 to 523,967
GFF476
GFF477 - hypothetical protein, at 524,061 to 525,731
GFF477
Position (kb) 523
524 Strain fitness (log2 ratio) -2
-1
0
1
2 at 522.186 kb on + strand at 522.186 kb on + strand at 522.186 kb on + strand at 522.187 kb on - strand at 522.254 kb on + strand at 522.254 kb on + strand at 522.254 kb on + strand at 522.254 kb on + strand at 522.254 kb on + strand at 522.254 kb on + strand at 522.254 kb on + strand at 522.254 kb on + strand at 522.255 kb on - strand at 522.255 kb on - strand at 522.255 kb on - strand at 522.255 kb on - strand at 522.255 kb on - strand at 522.255 kb on - strand at 522.255 kb on - strand at 522.258 kb on + strand at 522.258 kb on + strand at 522.258 kb on + strand at 522.258 kb on + strand at 522.258 kb on + strand at 522.259 kb on - strand at 522.259 kb on - strand at 522.259 kb on - strand at 522.283 kb on - strand at 522.365 kb on + strand, within GFF475 at 523.064 kb on + strand at 523.065 kb on - strand at 523.065 kb on - strand at 523.065 kb on - strand at 523.065 kb on - strand at 523.065 kb on - strand at 523.070 kb on + strand at 523.070 kb on + strand at 523.070 kb on + strand at 523.070 kb on + strand at 523.071 kb on - strand at 523.071 kb on - strand at 523.071 kb on - strand at 523.071 kb on - strand at 523.071 kb on - strand at 523.108 kb on + strand at 523.109 kb on - strand at 523.109 kb on - strand at 523.156 kb on + strand at 523.157 kb on - strand at 523.231 kb on + strand, within GFF476 at 523.231 kb on + strand, within GFF476 at 523.231 kb on + strand, within GFF476 at 523.231 kb on + strand, within GFF476 at 523.231 kb on + strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.232 kb on - strand, within GFF476 at 523.419 kb on + strand, within GFF476 at 523.585 kb on + strand, within GFF476 at 523.586 kb on - strand, within GFF476 at 523.669 kb on + strand, within GFF476 at 523.669 kb on + strand, within GFF476 at 523.669 kb on + strand, within GFF476 at 523.670 kb on - strand, within GFF476 at 523.746 kb on - strand, within GFF476 at 523.764 kb on - strand, within GFF476 at 523.850 kb on - strand, within GFF476 at 524.035 kb on + strand at 524.035 kb on + strand at 524.035 kb on + strand at 524.035 kb on + strand at 524.036 kb on - strand at 524.036 kb on - strand at 524.036 kb on - strand at 524.062 kb on + strand at 524.062 kb on + strand at 524.062 kb on + strand at 524.063 kb on - strand at 524.063 kb on - strand at 524.063 kb on - strand at 524.063 kb on - strand at 524.080 kb on + strand at 524.081 kb on - strand at 524.105 kb on + strand at 524.105 kb on + strand at 524.107 kb on + strand at 524.107 kb on + strand at 524.107 kb on + strand at 524.107 kb on + strand at 524.107 kb on + strand at 524.108 kb on - strand at 524.108 kb on - strand at 524.108 kb on - strand at 524.108 kb on - strand at 524.108 kb on - strand at 524.165 kb on - strand at 524.165 kb on - strand at 524.215 kb on + strand at 524.215 kb on + strand at 524.216 kb on - strand at 524.216 kb on - strand at 524.216 kb on - strand at 524.260 kb on + strand, within GFF477 at 524.260 kb on + strand, within GFF477 at 524.261 kb on - strand, within GFF477 at 524.266 kb on + strand, within GFF477 at 524.266 kb on + strand, within GFF477 at 524.266 kb on + strand, within GFF477 at 524.620 kb on + strand, within GFF477 at 524.738 kb on - strand, within GFF477 at 524.765 kb on + strand, within GFF477 at 524.884 kb on + strand, within GFF477 at 524.885 kb on - strand, within GFF477
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 522,186 + +0.8 522,186 + -0.8 522,186 + +0.7 522,187 - -0.6 522,254 + -0.7 522,254 + -0.5 522,254 + +0.1 522,254 + -1.4 522,254 + +0.2 522,254 + -0.2 522,254 + -0.6 522,254 + -0.6 522,255 - -0.9 522,255 - +0.6 522,255 - -0.0 522,255 - -1.0 522,255 - -0.7 522,255 - +0.5 522,255 - -0.6 522,258 + +0.3 522,258 + -0.2 522,258 + +0.3 522,258 + -0.5 522,258 + -0.5 522,259 - -0.7 522,259 - -1.2 522,259 - -0.3 522,283 - -0.3 522,365 + GFF475 0.15 -0.5 523,064 + +0.2 523,065 - -0.8 523,065 - -1.4 523,065 - -0.2 523,065 - +2.2 523,065 - -0.5 523,070 + +1.1 523,070 + -2.0 523,070 + +0.2 523,070 + +0.2 523,071 - +1.3 523,071 - +0.6 523,071 - +0.3 523,071 - -0.8 523,071 - +0.2 523,108 + -1.4 523,109 - +1.1 523,109 - +0.8 523,156 + -0.2 523,157 - -0.2 523,231 + GFF476 0.12 +0.6 523,231 + GFF476 0.12 -0.8 523,231 + GFF476 0.12 -0.5 523,231 + GFF476 0.12 -1.6 523,231 + GFF476 0.12 -0.8 523,232 - GFF476 0.12 -1.5 523,232 - GFF476 0.12 -0.5 523,232 - GFF476 0.12 +0.5 523,232 - GFF476 0.12 -0.6 523,232 - GFF476 0.12 -1.2 523,232 - GFF476 0.12 -0.8 523,232 - GFF476 0.12 -2.1 523,232 - GFF476 0.12 -0.5 523,232 - GFF476 0.12 -1.5 523,232 - GFF476 0.12 -0.5 523,232 - GFF476 0.12 -0.5 523,419 + GFF476 0.34 -2.0 523,585 + GFF476 0.54 +0.2 523,586 - GFF476 0.54 +0.8 523,669 + GFF476 0.64 -1.5 523,669 + GFF476 0.64 -1.4 523,669 + GFF476 0.64 -0.2 523,670 - GFF476 0.64 -1.0 523,746 - GFF476 0.73 +0.4 523,764 - GFF476 0.76 +1.1 523,850 - GFF476 0.86 -0.2 524,035 + +0.3 524,035 + -0.4 524,035 + -0.4 524,035 + -0.3 524,036 - +0.5 524,036 - -1.0 524,036 - +0.2 524,062 + -0.7 524,062 + +1.1 524,062 + -1.7 524,063 - -1.6 524,063 - -0.2 524,063 - -1.5 524,063 - -1.9 524,080 + -0.1 524,081 - -0.2 524,105 + -0.6 524,105 + -0.8 524,107 + -0.5 524,107 + +0.1 524,107 + +0.8 524,107 + -0.2 524,107 + -0.4 524,108 - -0.5 524,108 - +0.4 524,108 - -0.6 524,108 - -0.1 524,108 - -0.6 524,165 - +0.6 524,165 - -0.3 524,215 + -0.5 524,215 + +0.2 524,216 - +0.4 524,216 - +0.6 524,216 - -0.2 524,260 + GFF477 0.12 +0.3 524,260 + GFF477 0.12 +0.8 524,261 - GFF477 0.12 +0.2 524,266 + GFF477 0.12 -0.8 524,266 + GFF477 0.12 -0.8 524,266 + GFF477 0.12 -1.4 524,620 + GFF477 0.33 -2.3 524,738 - GFF477 0.41 -1.6 524,765 + GFF477 0.42 +0.8 524,884 + GFF477 0.49 -2.0 524,885 - GFF477 0.49 -1.9
Or see this region's nucleotide sequence