Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4609 and GFF4610 are separated by 76 nucleotides GFF4610 and GFF4611 are separated by 356 nucleotides GFF4611 and GFF4612 are separated by 37 nucleotides
GFF4609 - HTH-type transcriptional regulator DmlR, at 96,317 to 97,273
GFF4609
GFF4610 - Organic hydroperoxide resistance transcriptional regulator, at 97,350 to 97,805
GFF4610
GFF4611 - Organic hydroperoxide resistance protein OhrB, at 98,162 to 98,581
GFF4611
GFF4612 - Carboxylesterase NlhH, at 98,619 to 99,629
GFF4612
Position (kb) 97
98 Strain fitness (log2 ratio) -2
-1
0
1
2 at 96.766 kb on + strand, within GFF4609 at 96.845 kb on + strand, within GFF4609 at 97.076 kb on + strand, within GFF4609 at 97.076 kb on + strand, within GFF4609 at 97.077 kb on - strand, within GFF4609 at 97.077 kb on - strand, within GFF4609 at 97.148 kb on + strand, within GFF4609 at 97.149 kb on - strand, within GFF4609 at 97.149 kb on - strand, within GFF4609 at 97.284 kb on - strand at 97.284 kb on - strand at 97.284 kb on - strand at 97.284 kb on - strand at 97.287 kb on + strand at 97.288 kb on - strand at 97.300 kb on - strand at 97.314 kb on + strand at 97.315 kb on - strand at 97.315 kb on - strand at 97.443 kb on + strand, within GFF4610 at 97.444 kb on - strand, within GFF4610 at 97.444 kb on - strand, within GFF4610 at 97.444 kb on - strand, within GFF4610 at 97.444 kb on - strand, within GFF4610 at 97.485 kb on + strand, within GFF4610 at 97.938 kb on + strand at 97.982 kb on + strand at 97.994 kb on + strand at 97.995 kb on - strand at 97.995 kb on - strand at 98.068 kb on + strand at 98.076 kb on + strand at 98.076 kb on + strand at 98.077 kb on - strand at 98.077 kb on - strand at 98.077 kb on - strand at 98.174 kb on + strand at 98.174 kb on + strand at 98.174 kb on + strand at 98.175 kb on - strand at 98.175 kb on - strand at 98.175 kb on - strand at 98.235 kb on + strand, within GFF4611 at 98.235 kb on + strand, within GFF4611 at 98.236 kb on - strand, within GFF4611 at 98.236 kb on - strand, within GFF4611 at 98.236 kb on - strand, within GFF4611 at 98.529 kb on - strand, within GFF4611 at 98.579 kb on + strand at 98.579 kb on + strand at 98.579 kb on + strand at 98.579 kb on + strand at 98.580 kb on - strand at 98.580 kb on - strand at 98.580 kb on - strand at 98.580 kb on - strand at 98.668 kb on + strand at 98.668 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 96,766 + GFF4609 0.47 +0.6 96,845 + GFF4609 0.55 -0.1 97,076 + GFF4609 0.79 +0.1 97,076 + GFF4609 0.79 -0.3 97,077 - GFF4609 0.79 +0.5 97,077 - GFF4609 0.79 -1.7 97,148 + GFF4609 0.87 -0.3 97,149 - GFF4609 0.87 +0.3 97,149 - GFF4609 0.87 -0.3 97,284 - -1.7 97,284 - +0.5 97,284 - +0.3 97,284 - -1.2 97,287 + +0.2 97,288 - +0.2 97,300 - -0.7 97,314 + -0.7 97,315 - -0.3 97,315 - -0.0 97,443 + GFF4610 0.20 -0.2 97,444 - GFF4610 0.21 -1.5 97,444 - GFF4610 0.21 +0.3 97,444 - GFF4610 0.21 -0.7 97,444 - GFF4610 0.21 -2.6 97,485 + GFF4610 0.30 +0.0 97,938 + -0.2 97,982 + -0.5 97,994 + -1.5 97,995 - +0.0 97,995 - -0.0 98,068 + +0.0 98,076 + -0.3 98,076 + +0.0 98,077 - +0.0 98,077 - +0.2 98,077 - -0.1 98,174 + -1.5 98,174 + +0.6 98,174 + -0.6 98,175 - -1.8 98,175 - -1.0 98,175 - +0.2 98,235 + GFF4611 0.17 +0.1 98,235 + GFF4611 0.17 -0.3 98,236 - GFF4611 0.18 +0.5 98,236 - GFF4611 0.18 +0.4 98,236 - GFF4611 0.18 -0.8 98,529 - GFF4611 0.87 +2.4 98,579 + +0.6 98,579 + -0.9 98,579 + -0.4 98,579 + +0.2 98,580 - -0.4 98,580 - -0.4 98,580 - +0.1 98,580 - +0.2 98,668 + +0.8 98,668 + +0.5
Or see this region's nucleotide sequence