Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4335 and GFF4336 are separated by 135 nucleotides GFF4336 and GFF4337 overlap by 62 nucleotides GFF4337 and GFF4338 are separated by 41 nucleotides
GFF4335 - GTPase Der, at 50,676 to 52,148
GFF4335
GFF4336 - Outer membrane protein assembly factor BamB, at 52,284 to 53,489
GFF4336
GFF4337 - hypothetical protein, at 53,428 to 54,069
GFF4337
GFF4338 - Histidine--tRNA ligase, at 54,111 to 55,400
GFF4338
Position (kb) 52
53
54 Strain fitness (log2 ratio) -1
0
1 at 52.167 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.279 kb on - strand at 52.286 kb on - strand at 52.286 kb on - strand at 52.456 kb on - strand, within GFF4336 at 52.456 kb on - strand, within GFF4336 at 52.456 kb on - strand, within GFF4336 at 52.460 kb on - strand, within GFF4336 at 52.460 kb on - strand, within GFF4336 at 52.843 kb on - strand, within GFF4336 at 53.219 kb on - strand, within GFF4336 at 53.258 kb on - strand, within GFF4336 at 53.258 kb on - strand, within GFF4336 at 53.768 kb on - strand, within GFF4337 at 53.943 kb on - strand, within GFF4337
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 52,167 - -0.2 52,279 - +0.6 52,279 - -0.3 52,279 - -0.2 52,279 - +0.5 52,279 - +1.0 52,279 - +0.2 52,279 - +0.1 52,279 - -0.9 52,279 - +0.8 52,279 - -1.0 52,279 - +0.5 52,279 - +0.0 52,279 - +0.7 52,279 - -0.1 52,279 - +0.4 52,279 - -1.1 52,286 - -0.1 52,286 - -0.2 52,456 - GFF4336 0.14 -0.3 52,456 - GFF4336 0.14 +0.7 52,456 - GFF4336 0.14 -0.6 52,460 - GFF4336 0.15 -0.6 52,460 - GFF4336 0.15 +0.7 52,843 - GFF4336 0.46 +0.7 53,219 - GFF4336 0.78 -0.3 53,258 - GFF4336 0.81 +0.7 53,258 - GFF4336 0.81 -0.9 53,768 - GFF4337 0.53 -0.5 53,943 - GFF4337 0.80 +0.2
Or see this region's nucleotide sequence