Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4264 and GFF4265 are separated by 290 nucleotides GFF4265 and GFF4266 are separated by 38 nucleotides
GFF4264 - Protein YdgA, at 243,098 to 244,603
GFF4264
GFF4265 - hypothetical protein, at 244,894 to 245,583
GFF4265
GFF4266 - Outer membrane protein OprM, at 245,622 to 247,064
GFF4266
Position (kb) 244
245
246 Strain fitness (log2 ratio) -1
0
1 at 243.909 kb on + strand, within GFF4264 at 243.909 kb on + strand, within GFF4264 at 243.909 kb on + strand, within GFF4264 at 243.910 kb on - strand, within GFF4264 at 243.910 kb on - strand, within GFF4264 at 243.910 kb on - strand, within GFF4264 at 243.912 kb on + strand, within GFF4264 at 243.913 kb on - strand, within GFF4264 at 243.918 kb on + strand, within GFF4264 at 243.918 kb on + strand, within GFF4264 at 243.919 kb on - strand, within GFF4264 at 244.021 kb on - strand, within GFF4264 at 244.021 kb on - strand, within GFF4264 at 244.021 kb on - strand, within GFF4264 at 244.021 kb on - strand, within GFF4264 at 244.245 kb on + strand, within GFF4264 at 244.246 kb on - strand, within GFF4264 at 244.246 kb on - strand, within GFF4264 at 244.246 kb on - strand, within GFF4264 at 244.246 kb on - strand, within GFF4264 at 244.246 kb on - strand, within GFF4264 at 244.246 kb on - strand, within GFF4264 at 244.246 kb on - strand, within GFF4264 at 244.384 kb on - strand, within GFF4264 at 244.597 kb on + strand at 244.597 kb on + strand at 244.598 kb on - strand at 244.598 kb on - strand at 244.598 kb on - strand at 244.598 kb on - strand at 244.598 kb on - strand at 244.702 kb on + strand at 244.703 kb on - strand at 244.733 kb on + strand at 244.734 kb on - strand at 244.752 kb on - strand at 244.752 kb on - strand at 244.752 kb on - strand at 244.843 kb on + strand at 244.901 kb on + strand at 244.901 kb on + strand at 244.959 kb on + strand at 244.959 kb on + strand at 244.959 kb on + strand at 244.959 kb on + strand at 244.959 kb on + strand at 244.960 kb on - strand at 244.960 kb on - strand at 244.960 kb on - strand at 244.961 kb on + strand at 244.961 kb on + strand at 244.961 kb on + strand at 244.961 kb on + strand at 244.961 kb on + strand at 244.961 kb on + strand at 244.961 kb on + strand at 244.961 kb on + strand at 244.961 kb on + strand at 244.962 kb on - strand at 244.962 kb on - strand at 244.962 kb on - strand at 244.962 kb on - strand at 244.962 kb on - strand at 244.962 kb on - strand at 245.007 kb on + strand, within GFF4265 at 245.243 kb on + strand, within GFF4265 at 245.462 kb on + strand, within GFF4265 at 245.463 kb on - strand, within GFF4265 at 245.516 kb on + strand at 245.611 kb on + strand at 245.611 kb on + strand at 245.611 kb on + strand at 245.611 kb on + strand at 245.611 kb on + strand at 245.611 kb on + strand at 245.612 kb on - strand at 245.612 kb on - strand at 245.612 kb on - strand at 245.750 kb on + strand at 245.752 kb on + strand at 245.752 kb on + strand at 245.752 kb on + strand at 245.752 kb on + strand at 245.752 kb on + strand at 245.752 kb on + strand at 245.753 kb on - strand at 245.753 kb on - strand at 245.753 kb on - strand at 245.753 kb on - strand at 246.009 kb on + strand, within GFF4266 at 246.346 kb on + strand, within GFF4266 at 246.347 kb on - strand, within GFF4266 at 246.520 kb on + strand, within GFF4266 at 246.520 kb on + strand, within GFF4266 at 246.521 kb on - strand, within GFF4266
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 243,909 + GFF4264 0.54 -0.3 243,909 + GFF4264 0.54 +0.3 243,909 + GFF4264 0.54 -1.2 243,910 - GFF4264 0.54 -0.1 243,910 - GFF4264 0.54 -0.2 243,910 - GFF4264 0.54 -0.4 243,912 + GFF4264 0.54 -0.5 243,913 - GFF4264 0.54 -1.0 243,918 + GFF4264 0.54 +0.6 243,918 + GFF4264 0.54 -0.2 243,919 - GFF4264 0.55 +0.0 244,021 - GFF4264 0.61 +0.2 244,021 - GFF4264 0.61 -0.9 244,021 - GFF4264 0.61 -0.9 244,021 - GFF4264 0.61 -0.1 244,245 + GFF4264 0.76 -0.6 244,246 - GFF4264 0.76 -0.8 244,246 - GFF4264 0.76 -0.2 244,246 - GFF4264 0.76 +0.9 244,246 - GFF4264 0.76 +0.1 244,246 - GFF4264 0.76 -0.2 244,246 - GFF4264 0.76 -0.2 244,246 - GFF4264 0.76 +0.1 244,384 - GFF4264 0.85 -0.7 244,597 + +0.4 244,597 + -1.0 244,598 - -0.3 244,598 - -0.3 244,598 - -1.2 244,598 - -0.4 244,598 - +0.2 244,702 + -1.3 244,703 - +0.0 244,733 + -0.0 244,734 - -0.2 244,752 - +0.6 244,752 - +0.6 244,752 - -0.6 244,843 + -1.0 244,901 + +1.0 244,901 + +0.2 244,959 + -0.4 244,959 + +0.3 244,959 + +0.7 244,959 + +0.7 244,959 + +0.6 244,960 - +0.0 244,960 - +0.1 244,960 - -0.1 244,961 + +0.2 244,961 + -0.4 244,961 + -0.5 244,961 + -0.5 244,961 + +0.3 244,961 + +0.2 244,961 + +0.2 244,961 + -0.4 244,961 + -0.1 244,962 - -0.2 244,962 - -0.5 244,962 - -0.4 244,962 - -0.9 244,962 - +0.8 244,962 - +0.2 245,007 + GFF4265 0.16 -1.2 245,243 + GFF4265 0.51 -0.2 245,462 + GFF4265 0.82 -0.5 245,463 - GFF4265 0.82 -0.2 245,516 + -1.1 245,611 + -1.2 245,611 + +0.8 245,611 + -0.5 245,611 + -0.2 245,611 + -0.6 245,611 + -1.2 245,612 - -0.3 245,612 - +0.9 245,612 - -0.6 245,750 + -0.5 245,752 + -1.0 245,752 + +0.1 245,752 + -0.5 245,752 + -0.0 245,752 + -0.4 245,752 + +0.1 245,753 - +1.5 245,753 - -1.3 245,753 - +0.7 245,753 - -1.0 246,009 + GFF4266 0.27 +0.1 246,346 + GFF4266 0.50 -0.8 246,347 - GFF4266 0.50 -0.1 246,520 + GFF4266 0.62 -1.4 246,520 + GFF4266 0.62 +0.5 246,521 - GFF4266 0.62 -0.2
Or see this region's nucleotide sequence