Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3723 and GFF3724 are separated by 236 nucleotides GFF3724 and GFF3725 are separated by 27 nucleotides
GFF3723 - hypothetical protein, at 333,757 to 335,160
GFF3723
GFF3724 - hypothetical protein, at 335,397 to 335,642
GFF3724
GFF3725 - Adenylylsulfate reductase subunit alpha, at 335,670 to 337,400
GFF3725
Position (kb) 335
336 Strain fitness (log2 ratio) -1
0
1 at 334.460 kb on + strand, within GFF3723 at 334.517 kb on + strand, within GFF3723 at 334.517 kb on + strand, within GFF3723 at 334.518 kb on - strand, within GFF3723 at 334.518 kb on - strand, within GFF3723 at 334.971 kb on - strand, within GFF3723 at 334.971 kb on - strand, within GFF3723 at 335.272 kb on + strand at 335.325 kb on + strand at 335.326 kb on - strand at 335.468 kb on - strand, within GFF3724 at 335.492 kb on - strand, within GFF3724 at 335.492 kb on - strand, within GFF3724 at 335.544 kb on + strand, within GFF3724 at 335.635 kb on + strand at 335.636 kb on - strand at 335.704 kb on + strand at 335.705 kb on - strand at 335.705 kb on - strand at 335.705 kb on - strand at 335.705 kb on - strand at 335.740 kb on + strand at 335.855 kb on - strand, within GFF3725 at 336.079 kb on + strand, within GFF3725 at 336.080 kb on - strand, within GFF3725 at 336.128 kb on - strand, within GFF3725 at 336.226 kb on + strand, within GFF3725 at 336.226 kb on + strand, within GFF3725 at 336.226 kb on + strand, within GFF3725 at 336.227 kb on - strand, within GFF3725 at 336.247 kb on + strand, within GFF3725 at 336.248 kb on - strand, within GFF3725 at 336.248 kb on - strand, within GFF3725 at 336.248 kb on - strand, within GFF3725 at 336.395 kb on - strand, within GFF3725 at 336.568 kb on + strand, within GFF3725 at 336.610 kb on + strand, within GFF3725 at 336.610 kb on + strand, within GFF3725 at 336.611 kb on - strand, within GFF3725
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 334,460 + GFF3723 0.50 +0.3 334,517 + GFF3723 0.54 -0.0 334,517 + GFF3723 0.54 +1.0 334,518 - GFF3723 0.54 +1.2 334,518 - GFF3723 0.54 +0.0 334,971 - GFF3723 0.86 -1.4 334,971 - GFF3723 0.86 -0.2 335,272 + -0.8 335,325 + -1.2 335,326 - -0.7 335,468 - GFF3724 0.29 -1.0 335,492 - GFF3724 0.39 -0.3 335,492 - GFF3724 0.39 -1.1 335,544 + GFF3724 0.60 -1.2 335,635 + +0.4 335,636 - -0.6 335,704 + +0.7 335,705 - -1.2 335,705 - -0.4 335,705 - -0.8 335,705 - -0.2 335,740 + -1.2 335,855 - GFF3725 0.11 +0.4 336,079 + GFF3725 0.24 -0.9 336,080 - GFF3725 0.24 +0.0 336,128 - GFF3725 0.26 -0.2 336,226 + GFF3725 0.32 +0.7 336,226 + GFF3725 0.32 -0.4 336,226 + GFF3725 0.32 -0.4 336,227 - GFF3725 0.32 -0.3 336,247 + GFF3725 0.33 -0.8 336,248 - GFF3725 0.33 -1.4 336,248 - GFF3725 0.33 +0.5 336,248 - GFF3725 0.33 +0.4 336,395 - GFF3725 0.42 -0.5 336,568 + GFF3725 0.52 +0.3 336,610 + GFF3725 0.54 +0.2 336,610 + GFF3725 0.54 -0.5 336,611 - GFF3725 0.54 +0.5
Or see this region's nucleotide sequence