Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3571 and GFF3572 overlap by 4 nucleotides GFF3572 and GFF3573 are separated by 11 nucleotides
GFF3571 - UDP-glucose 6-dehydrogenase, at 157,028 to 158,386
GFF3571
GFF3572 - UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,4-galactosyltransferase, at 158,383 to 159,090
GFF3572
GFF3573 - D-inositol-3-phosphate glycosyltransferase, at 159,102 to 160,181
GFF3573
Position (kb) 158
159
160 Strain fitness (log2 ratio) -2
-1
0
1 at 157.593 kb on - strand, within GFF3571 at 157.661 kb on + strand, within GFF3571 at 157.662 kb on - strand, within GFF3571 at 157.799 kb on + strand, within GFF3571 at 157.799 kb on + strand, within GFF3571 at 158.130 kb on - strand, within GFF3571 at 158.330 kb on + strand at 158.330 kb on + strand at 158.331 kb on - strand at 158.331 kb on - strand at 158.331 kb on - strand at 158.331 kb on - strand at 158.506 kb on + strand, within GFF3572 at 158.926 kb on + strand, within GFF3572 at 158.926 kb on + strand, within GFF3572 at 158.929 kb on + strand, within GFF3572 at 159.108 kb on - strand at 159.108 kb on - strand at 159.108 kb on - strand at 159.108 kb on - strand at 159.108 kb on - strand at 159.414 kb on + strand, within GFF3573 at 159.415 kb on - strand, within GFF3573 at 159.415 kb on - strand, within GFF3573 at 159.415 kb on - strand, within GFF3573 at 159.480 kb on + strand, within GFF3573 at 159.480 kb on + strand, within GFF3573 at 159.481 kb on - strand, within GFF3573 at 159.489 kb on + strand, within GFF3573 at 159.490 kb on - strand, within GFF3573
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 157,593 - GFF3571 0.42 +0.2 157,661 + GFF3571 0.47 -0.2 157,662 - GFF3571 0.47 +1.3 157,799 + GFF3571 0.57 -0.1 157,799 + GFF3571 0.57 -0.1 158,130 - GFF3571 0.81 +0.0 158,330 + +0.4 158,330 + -0.6 158,331 - +0.1 158,331 - -0.2 158,331 - -0.4 158,331 - +0.1 158,506 + GFF3572 0.17 -1.6 158,926 + GFF3572 0.77 -1.5 158,926 + GFF3572 0.77 -0.7 158,929 + GFF3572 0.77 -0.4 159,108 - -0.3 159,108 - +0.1 159,108 - -2.7 159,108 - -0.2 159,108 - -0.7 159,414 + GFF3573 0.29 +0.8 159,415 - GFF3573 0.29 -1.4 159,415 - GFF3573 0.29 -0.5 159,415 - GFF3573 0.29 -0.7 159,480 + GFF3573 0.35 -0.4 159,480 + GFF3573 0.35 -0.0 159,481 - GFF3573 0.35 +0.1 159,489 + GFF3573 0.36 -0.3 159,490 - GFF3573 0.36 +1.7
Or see this region's nucleotide sequence