Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3232 and GFF3233 are separated by 36 nucleotides GFF3233 and GFF3234 are separated by 18 nucleotides GFF3234 and GFF3235 are separated by 119 nucleotides
GFF3232 - 30S ribosomal protein S18, at 209,533 to 209,763
GFF3232
GFF3233 - hypothetical protein, at 209,800 to 210,693
GFF3233
GFF3234 - 50S ribosomal protein L9, at 210,712 to 211,158
GFF3234
GFF3235 - Replicative DNA helicase, at 211,278 to 212,675
GFF3235
Position (kb) 210
211
212 Strain fitness (log2 ratio) -1
0
1 at 210.343 kb on + strand, within GFF3233 at 210.407 kb on + strand, within GFF3233 at 210.408 kb on - strand, within GFF3233 at 210.480 kb on - strand, within GFF3233 at 210.562 kb on + strand, within GFF3233 at 210.562 kb on + strand, within GFF3233 at 210.562 kb on + strand, within GFF3233 at 210.562 kb on + strand, within GFF3233 at 210.563 kb on - strand, within GFF3233 at 210.563 kb on - strand, within GFF3233 at 210.563 kb on - strand, within GFF3233 at 210.596 kb on - strand, within GFF3233 at 210.596 kb on - strand, within GFF3233 at 210.768 kb on - strand, within GFF3234 at 210.793 kb on - strand, within GFF3234 at 210.796 kb on + strand, within GFF3234 at 210.797 kb on - strand, within GFF3234 at 210.797 kb on - strand, within GFF3234 at 210.797 kb on - strand, within GFF3234 at 211.134 kb on - strand at 211.156 kb on + strand at 211.156 kb on + strand at 211.157 kb on - strand at 211.157 kb on - strand at 211.157 kb on - strand at 211.157 kb on - strand at 211.262 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 210,343 + GFF3233 0.61 -1.0 210,407 + GFF3233 0.68 -0.6 210,408 - GFF3233 0.68 -0.9 210,480 - GFF3233 0.76 +0.9 210,562 + GFF3233 0.85 +0.3 210,562 + GFF3233 0.85 +0.3 210,562 + GFF3233 0.85 +1.1 210,562 + GFF3233 0.85 -0.4 210,563 - GFF3233 0.85 -0.3 210,563 - GFF3233 0.85 -0.3 210,563 - GFF3233 0.85 +1.0 210,596 - GFF3233 0.89 -0.6 210,596 - GFF3233 0.89 -0.3 210,768 - GFF3234 0.13 +1.3 210,793 - GFF3234 0.18 -0.6 210,796 + GFF3234 0.19 -0.3 210,797 - GFF3234 0.19 -0.4 210,797 - GFF3234 0.19 -0.4 210,797 - GFF3234 0.19 -0.6 211,134 - -0.4 211,156 + +0.3 211,156 + +1.3 211,157 - +0.1 211,157 - -0.2 211,157 - +0.3 211,157 - -1.4 211,262 + -0.2
Or see this region's nucleotide sequence