Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3119 and GFF3120 overlap by 17 nucleotides GFF3120 and GFF3121 overlap by 4 nucleotides GFF3121 and GFF3122 overlap by 8 nucleotides
GFF3119 - hypothetical protein, at 66,742 to 69,072
GFF3119
GFF3120 - hypothetical protein, at 69,056 to 69,658
GFF3120
GFF3121 - hypothetical protein, at 69,655 to 70,080
GFF3121
GFF3122 - Tyrosine 2,3-aminomutase, at 70,073 to 71,617
GFF3122
Position (kb) 69
70 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 68.098 kb on + strand, within GFF3119 at 68.098 kb on + strand, within GFF3119 at 68.098 kb on + strand, within GFF3119 at 68.098 kb on + strand, within GFF3119 at 68.098 kb on + strand, within GFF3119 at 68.099 kb on - strand, within GFF3119 at 68.099 kb on - strand, within GFF3119 at 68.102 kb on + strand, within GFF3119 at 68.102 kb on + strand, within GFF3119 at 68.102 kb on + strand, within GFF3119 at 68.102 kb on + strand, within GFF3119 at 68.103 kb on - strand, within GFF3119 at 68.103 kb on - strand, within GFF3119 at 68.103 kb on - strand, within GFF3119 at 68.351 kb on + strand, within GFF3119 at 68.351 kb on + strand, within GFF3119 at 68.352 kb on - strand, within GFF3119 at 68.689 kb on + strand, within GFF3119 at 68.690 kb on - strand, within GFF3119 at 69.418 kb on - strand, within GFF3120 at 69.794 kb on + strand, within GFF3121 at 69.794 kb on + strand, within GFF3121 at 69.794 kb on + strand, within GFF3121 at 69.795 kb on - strand, within GFF3121 at 69.795 kb on - strand, within GFF3121 at 69.795 kb on - strand, within GFF3121 at 69.876 kb on - strand, within GFF3121 at 69.932 kb on + strand, within GFF3121 at 69.932 kb on + strand, within GFF3121 at 69.932 kb on + strand, within GFF3121 at 69.932 kb on + strand, within GFF3121 at 69.933 kb on - strand, within GFF3121 at 69.981 kb on - strand, within GFF3121 at 69.989 kb on + strand, within GFF3121 at 69.990 kb on - strand, within GFF3121 at 70.516 kb on - strand, within GFF3122 at 70.516 kb on - strand, within GFF3122 at 70.516 kb on - strand, within GFF3122 at 70.516 kb on - strand, within GFF3122 at 70.617 kb on + strand, within GFF3122 at 70.618 kb on - strand, within GFF3122
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 68,098 + GFF3119 0.58 +0.9 68,098 + GFF3119 0.58 +0.4 68,098 + GFF3119 0.58 -0.4 68,098 + GFF3119 0.58 -0.2 68,098 + GFF3119 0.58 -1.1 68,099 - GFF3119 0.58 -0.4 68,099 - GFF3119 0.58 -0.0 68,102 + GFF3119 0.58 +0.8 68,102 + GFF3119 0.58 +0.1 68,102 + GFF3119 0.58 +0.7 68,102 + GFF3119 0.58 -1.6 68,103 - GFF3119 0.58 +0.5 68,103 - GFF3119 0.58 +0.4 68,103 - GFF3119 0.58 +0.1 68,351 + GFF3119 0.69 -0.4 68,351 + GFF3119 0.69 -3.2 68,352 - GFF3119 0.69 +0.3 68,689 + GFF3119 0.84 +1.0 68,690 - GFF3119 0.84 -0.7 69,418 - GFF3120 0.60 -0.6 69,794 + GFF3121 0.33 -0.4 69,794 + GFF3121 0.33 +0.3 69,794 + GFF3121 0.33 -0.4 69,795 - GFF3121 0.33 -0.9 69,795 - GFF3121 0.33 +0.0 69,795 - GFF3121 0.33 -1.6 69,876 - GFF3121 0.52 -1.0 69,932 + GFF3121 0.65 +0.0 69,932 + GFF3121 0.65 +0.4 69,932 + GFF3121 0.65 +1.0 69,932 + GFF3121 0.65 +0.1 69,933 - GFF3121 0.65 +1.3 69,981 - GFF3121 0.77 -0.9 69,989 + GFF3121 0.78 -0.3 69,990 - GFF3121 0.79 +0.3 70,516 - GFF3122 0.29 -0.1 70,516 - GFF3122 0.29 +0.7 70,516 - GFF3122 0.29 -0.3 70,516 - GFF3122 0.29 -0.6 70,617 + GFF3122 0.35 +0.3 70,618 - GFF3122 0.35 -0.0
Or see this region's nucleotide sequence