Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3031 and GFF3032 overlap by 14 nucleotides GFF3032 and GFF3033 are separated by 247 nucleotides
GFF3031 - 6-phosphogluconolactonase, at 431,615 to 432,790
GFF3031
GFF3032 - hypothetical protein, at 432,777 to 433,088
GFF3032
GFF3033 - Alpha-ketoglutaric semialdehyde dehydrogenase, at 433,336 to 434,916
GFF3033
Position (kb) 432
433
434 Strain fitness (log2 ratio) -1
0
1 at 431.856 kb on - strand, within GFF3031 at 431.987 kb on + strand, within GFF3031 at 432.000 kb on + strand, within GFF3031 at 432.001 kb on - strand, within GFF3031 at 432.001 kb on - strand, within GFF3031 at 432.159 kb on + strand, within GFF3031 at 432.159 kb on + strand, within GFF3031 at 432.159 kb on + strand, within GFF3031 at 432.160 kb on - strand, within GFF3031 at 432.160 kb on - strand, within GFF3031 at 432.165 kb on + strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.207 kb on + strand, within GFF3031 at 432.207 kb on + strand, within GFF3031 at 432.208 kb on - strand, within GFF3031 at 432.375 kb on + strand, within GFF3031 at 432.660 kb on + strand, within GFF3031 at 432.661 kb on - strand, within GFF3031 at 432.661 kb on - strand, within GFF3031 at 432.661 kb on - strand, within GFF3031 at 432.661 kb on - strand, within GFF3031 at 432.687 kb on + strand at 432.778 kb on + strand at 432.791 kb on + strand at 432.792 kb on - strand at 432.792 kb on - strand at 432.822 kb on + strand, within GFF3032 at 432.823 kb on - strand, within GFF3032 at 432.823 kb on - strand, within GFF3032 at 433.046 kb on + strand, within GFF3032 at 433.047 kb on - strand, within GFF3032 at 433.326 kb on - strand at 433.326 kb on - strand at 433.338 kb on - strand at 433.431 kb on - strand at 433.723 kb on + strand, within GFF3033 at 433.723 kb on + strand, within GFF3033 at 433.890 kb on - strand, within GFF3033 at 434.050 kb on - strand, within GFF3033
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 431,856 - GFF3031 0.20 +1.2 431,987 + GFF3031 0.32 -0.4 432,000 + GFF3031 0.33 -0.0 432,001 - GFF3031 0.33 -0.3 432,001 - GFF3031 0.33 -1.0 432,159 + GFF3031 0.46 +0.0 432,159 + GFF3031 0.46 +0.2 432,159 + GFF3031 0.46 -0.3 432,160 - GFF3031 0.46 +0.3 432,160 - GFF3031 0.46 -0.8 432,165 + GFF3031 0.47 +0.1 432,166 - GFF3031 0.47 -0.9 432,166 - GFF3031 0.47 +0.4 432,166 - GFF3031 0.47 +0.4 432,166 - GFF3031 0.47 +0.6 432,166 - GFF3031 0.47 -0.3 432,166 - GFF3031 0.47 +0.4 432,166 - GFF3031 0.47 -0.5 432,207 + GFF3031 0.50 -0.4 432,207 + GFF3031 0.50 -0.9 432,208 - GFF3031 0.50 -0.9 432,375 + GFF3031 0.65 +0.9 432,660 + GFF3031 0.89 -0.4 432,661 - GFF3031 0.89 -0.7 432,661 - GFF3031 0.89 -0.7 432,661 - GFF3031 0.89 +0.1 432,661 - GFF3031 0.89 +1.0 432,687 + +0.5 432,778 + -0.0 432,791 + +0.8 432,792 - -1.2 432,792 - -0.5 432,822 + GFF3032 0.14 -1.0 432,823 - GFF3032 0.15 -1.4 432,823 - GFF3032 0.15 -0.5 433,046 + GFF3032 0.86 +0.3 433,047 - GFF3032 0.87 -0.6 433,326 - +0.5 433,326 - -0.7 433,338 - -0.6 433,431 - -1.2 433,723 + GFF3033 0.24 +0.4 433,723 + GFF3033 0.24 +1.0 433,890 - GFF3033 0.35 +1.7 434,050 - GFF3033 0.45 -0.6
Or see this region's nucleotide sequence