Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2913 and GFF2914 are separated by 285 nucleotides GFF2914 and GFF2915 are separated by 15 nucleotides
GFF2913 - L-threonine dehydratase biosynthetic IlvA, at 281,142 to 282,155
GFF2913
GFF2914 - hypothetical protein, at 282,441 to 282,620
GFF2914
GFF2915 - Sensor protein RstB, at 282,636 to 283,937
GFF2915
Position (kb) 282
283 Strain fitness (log2 ratio) -2
-1
0
1 at 281.450 kb on + strand, within GFF2913 at 281.463 kb on + strand, within GFF2913 at 281.463 kb on + strand, within GFF2913 at 281.463 kb on + strand, within GFF2913 at 281.463 kb on + strand, within GFF2913 at 281.464 kb on - strand, within GFF2913 at 281.499 kb on + strand, within GFF2913 at 281.499 kb on + strand, within GFF2913 at 281.554 kb on + strand, within GFF2913 at 281.554 kb on + strand, within GFF2913 at 281.554 kb on + strand, within GFF2913 at 281.554 kb on + strand, within GFF2913 at 281.555 kb on - strand, within GFF2913 at 281.563 kb on + strand, within GFF2913 at 281.563 kb on + strand, within GFF2913 at 281.607 kb on - strand, within GFF2913 at 281.828 kb on + strand, within GFF2913 at 281.829 kb on - strand, within GFF2913 at 281.829 kb on - strand, within GFF2913 at 281.880 kb on + strand, within GFF2913 at 281.880 kb on + strand, within GFF2913 at 281.962 kb on + strand, within GFF2913 at 281.962 kb on + strand, within GFF2913 at 281.962 kb on + strand, within GFF2913 at 281.962 kb on + strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 282.085 kb on + strand at 282.085 kb on + strand at 282.085 kb on + strand at 282.115 kb on + strand at 282.115 kb on + strand at 282.116 kb on - strand at 282.197 kb on + strand at 282.197 kb on + strand at 282.197 kb on + strand at 282.198 kb on - strand at 282.211 kb on + strand at 282.241 kb on + strand at 282.267 kb on - strand at 282.267 kb on - strand at 282.269 kb on + strand at 282.269 kb on + strand at 282.269 kb on + strand at 282.269 kb on + strand at 282.269 kb on + strand at 282.270 kb on - strand at 282.270 kb on - strand at 282.447 kb on - strand at 282.572 kb on + strand, within GFF2914 at 282.572 kb on + strand, within GFF2914 at 282.573 kb on - strand, within GFF2914 at 282.622 kb on - strand at 282.705 kb on - strand at 282.858 kb on + strand, within GFF2915 at 283.126 kb on + strand, within GFF2915 at 283.522 kb on + strand, within GFF2915 at 283.522 kb on + strand, within GFF2915 at 283.522 kb on + strand, within GFF2915 at 283.522 kb on + strand, within GFF2915 at 283.523 kb on - strand, within GFF2915 at 283.593 kb on + strand, within GFF2915
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 281,450 + GFF2913 0.30 +1.1 281,463 + GFF2913 0.32 -0.4 281,463 + GFF2913 0.32 +1.2 281,463 + GFF2913 0.32 -1.7 281,463 + GFF2913 0.32 +0.1 281,464 - GFF2913 0.32 -0.4 281,499 + GFF2913 0.35 +0.1 281,499 + GFF2913 0.35 -0.1 281,554 + GFF2913 0.41 +0.3 281,554 + GFF2913 0.41 +0.3 281,554 + GFF2913 0.41 -1.0 281,554 + GFF2913 0.41 -0.9 281,555 - GFF2913 0.41 +0.9 281,563 + GFF2913 0.42 -0.3 281,563 + GFF2913 0.42 -1.8 281,607 - GFF2913 0.46 -0.6 281,828 + GFF2913 0.68 -0.8 281,829 - GFF2913 0.68 -0.6 281,829 - GFF2913 0.68 +0.1 281,880 + GFF2913 0.73 +0.3 281,880 + GFF2913 0.73 +0.7 281,962 + GFF2913 0.81 -0.5 281,962 + GFF2913 0.81 +0.4 281,962 + GFF2913 0.81 +0.6 281,962 + GFF2913 0.81 -0.3 281,963 - GFF2913 0.81 +0.4 281,963 - GFF2913 0.81 -0.2 281,963 - GFF2913 0.81 +0.0 281,963 - GFF2913 0.81 -0.8 281,963 - GFF2913 0.81 -2.2 281,963 - GFF2913 0.81 +1.1 281,963 - GFF2913 0.81 +0.2 281,963 - GFF2913 0.81 -0.6 281,963 - GFF2913 0.81 -1.2 281,963 - GFF2913 0.81 +0.5 281,963 - GFF2913 0.81 -1.0 282,085 + -0.7 282,085 + +0.3 282,085 + -0.4 282,115 + +0.1 282,115 + -1.7 282,116 - +1.0 282,197 + -0.3 282,197 + -0.1 282,197 + +0.6 282,198 - +0.6 282,211 + -0.6 282,241 + +0.0 282,267 - +0.2 282,267 - +0.3 282,269 + +0.6 282,269 + -0.3 282,269 + -0.2 282,269 + +0.1 282,269 + -0.4 282,270 - -0.4 282,270 - +0.5 282,447 - +0.2 282,572 + GFF2914 0.73 -0.2 282,572 + GFF2914 0.73 -0.4 282,573 - GFF2914 0.73 -1.2 282,622 - -1.7 282,705 - -0.2 282,858 + GFF2915 0.17 +0.8 283,126 + GFF2915 0.38 -2.2 283,522 + GFF2915 0.68 +0.4 283,522 + GFF2915 0.68 -0.2 283,522 + GFF2915 0.68 +0.6 283,522 + GFF2915 0.68 +0.2 283,523 - GFF2915 0.68 +1.3 283,593 + GFF2915 0.74 +1.1
Or see this region's nucleotide sequence