Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1837 and GFF1838 are separated by 17 nucleotides GFF1838 and GFF1839 are separated by 115 nucleotides GFF1839 and GFF1840 are separated by 22 nucleotides
GFF1837 - Intermembrane phospholipid transport system binding protein MlaC, at 46,187 to 46,840
GFF1837
GFF1838 - hypothetical protein, at 46,858 to 47,142
GFF1838
GFF1839 - putative protein, at 47,258 to 47,497
GFF1839
GFF1840 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 47,520 to 48,785
GFF1840
Position (kb) 47
48 Strain fitness (log2 ratio) -2
-1
0
1 at 46.334 kb on + strand, within GFF1837 at 46.334 kb on + strand, within GFF1837 at 46.334 kb on + strand, within GFF1837 at 46.334 kb on + strand, within GFF1837 at 46.335 kb on - strand, within GFF1837 at 46.335 kb on - strand, within GFF1837 at 46.335 kb on - strand, within GFF1837 at 46.335 kb on - strand, within GFF1837 at 46.335 kb on - strand, within GFF1837 at 46.335 kb on - strand, within GFF1837 at 46.358 kb on + strand, within GFF1837 at 46.359 kb on - strand, within GFF1837 at 46.433 kb on + strand, within GFF1837 at 46.434 kb on - strand, within GFF1837 at 46.434 kb on - strand, within GFF1837 at 46.506 kb on - strand, within GFF1837 at 46.526 kb on + strand, within GFF1837 at 46.527 kb on - strand, within GFF1837 at 46.622 kb on + strand, within GFF1837 at 46.623 kb on - strand, within GFF1837 at 46.635 kb on - strand, within GFF1837 at 46.635 kb on - strand, within GFF1837 at 47.152 kb on + strand at 47.152 kb on + strand at 47.152 kb on + strand at 47.152 kb on + strand at 47.152 kb on + strand at 47.153 kb on - strand at 47.153 kb on - strand at 47.154 kb on + strand at 47.154 kb on + strand at 47.154 kb on + strand at 47.154 kb on + strand at 47.213 kb on + strand at 47.213 kb on + strand at 47.213 kb on + strand at 47.313 kb on + strand, within GFF1839 at 47.313 kb on + strand, within GFF1839 at 47.313 kb on + strand, within GFF1839 at 47.405 kb on + strand, within GFF1839 at 47.405 kb on + strand, within GFF1839
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 46,334 + GFF1837 0.22 +1.4 46,334 + GFF1837 0.22 +0.8 46,334 + GFF1837 0.22 -2.0 46,334 + GFF1837 0.22 +0.8 46,335 - GFF1837 0.23 -0.1 46,335 - GFF1837 0.23 +0.6 46,335 - GFF1837 0.23 +0.0 46,335 - GFF1837 0.23 -0.8 46,335 - GFF1837 0.23 +1.3 46,335 - GFF1837 0.23 -0.1 46,358 + GFF1837 0.26 -0.6 46,359 - GFF1837 0.26 +0.7 46,433 + GFF1837 0.38 -0.4 46,434 - GFF1837 0.38 +1.6 46,434 - GFF1837 0.38 +1.2 46,506 - GFF1837 0.49 +0.0 46,526 + GFF1837 0.52 -1.5 46,527 - GFF1837 0.52 -0.3 46,622 + GFF1837 0.67 -0.4 46,623 - GFF1837 0.67 +0.6 46,635 - GFF1837 0.69 +0.2 46,635 - GFF1837 0.69 +0.6 47,152 + +0.7 47,152 + -0.5 47,152 + +0.1 47,152 + -0.3 47,152 + -2.1 47,153 - -0.1 47,153 - -0.4 47,154 + -1.5 47,154 + +0.1 47,154 + +0.0 47,154 + -0.2 47,213 + +0.4 47,213 + -0.0 47,213 + -0.3 47,313 + GFF1839 0.23 +0.0 47,313 + GFF1839 0.23 -1.5 47,313 + GFF1839 0.23 -0.7 47,405 + GFF1839 0.61 -1.3 47,405 + GFF1839 0.61 -1.3
Or see this region's nucleotide sequence