Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF14 and GFF15 are separated by 9 nucleotides GFF15 and GFF16 are separated by 124 nucleotides GFF16 and GFF17 overlap by 4 nucleotides
GFF14 - Cyclic AMP receptor-like protein, at 12,328 to 12,972
GFF14
GFF15 - hypothetical protein, at 12,982 to 13,683
GFF15
GFF16 - Indole-3-glycerol phosphate synthase, at 13,808 to 14,644
GFF16
GFF17 - Anthranilate phosphoribosyltransferase, at 14,641 to 15,690
GFF17
Position (kb) 13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 12.992 kb on + strand at 12.993 kb on - strand at 13.139 kb on - strand, within GFF15 at 13.412 kb on + strand, within GFF15 at 13.412 kb on + strand, within GFF15 at 13.412 kb on + strand, within GFF15 at 13.413 kb on - strand, within GFF15 at 13.413 kb on - strand, within GFF15 at 13.413 kb on - strand, within GFF15 at 13.413 kb on - strand, within GFF15 at 13.722 kb on - strand at 13.722 kb on - strand at 13.920 kb on + strand, within GFF16 at 13.920 kb on + strand, within GFF16 at 13.920 kb on + strand, within GFF16 at 13.921 kb on - strand, within GFF16 at 13.921 kb on - strand, within GFF16 at 13.921 kb on - strand, within GFF16 at 14.048 kb on - strand, within GFF16 at 14.048 kb on - strand, within GFF16 at 14.248 kb on + strand, within GFF16 at 14.323 kb on - strand, within GFF16 at 14.323 kb on - strand, within GFF16 at 14.323 kb on - strand, within GFF16 at 14.391 kb on + strand, within GFF16 at 14.391 kb on + strand, within GFF16 at 14.392 kb on - strand, within GFF16 at 14.392 kb on - strand, within GFF16 at 14.392 kb on - strand, within GFF16 at 14.636 kb on + strand at 14.637 kb on - strand at 14.948 kb on + strand, within GFF17 at 14.949 kb on - strand, within GFF17 at 15.103 kb on + strand, within GFF17 at 15.104 kb on - strand, within GFF17 at 15.104 kb on - strand, within GFF17 at 15.297 kb on - strand, within GFF17 at 15.297 kb on - strand, within GFF17 at 15.424 kb on - strand, within GFF17 at 15.424 kb on - strand, within GFF17 at 15.448 kb on + strand, within GFF17 at 15.449 kb on - strand, within GFF17
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 12,992 + -0.3 12,993 - -0.6 13,139 - GFF15 0.22 +1.0 13,412 + GFF15 0.61 +0.2 13,412 + GFF15 0.61 +0.4 13,412 + GFF15 0.61 +0.5 13,413 - GFF15 0.61 +0.7 13,413 - GFF15 0.61 -0.2 13,413 - GFF15 0.61 +0.5 13,413 - GFF15 0.61 -0.4 13,722 - +0.5 13,722 - +0.6 13,920 + GFF16 0.13 -2.7 13,920 + GFF16 0.13 -2.0 13,920 + GFF16 0.13 -2.2 13,921 - GFF16 0.14 -1.8 13,921 - GFF16 0.14 -1.6 13,921 - GFF16 0.14 -1.3 14,048 - GFF16 0.29 -3.4 14,048 - GFF16 0.29 -2.7 14,248 + GFF16 0.53 -2.7 14,323 - GFF16 0.62 -2.4 14,323 - GFF16 0.62 -2.8 14,323 - GFF16 0.62 -1.3 14,391 + GFF16 0.70 -2.5 14,391 + GFF16 0.70 -1.4 14,392 - GFF16 0.70 -2.4 14,392 - GFF16 0.70 -0.6 14,392 - GFF16 0.70 -1.4 14,636 + -3.4 14,637 - -2.5 14,948 + GFF17 0.29 +1.0 14,949 - GFF17 0.29 -3.2 15,103 + GFF17 0.44 -0.5 15,104 - GFF17 0.44 -3.5 15,104 - GFF17 0.44 -2.5 15,297 - GFF17 0.62 -2.8 15,297 - GFF17 0.62 -2.3 15,424 - GFF17 0.75 -2.5 15,424 - GFF17 0.75 -3.0 15,448 + GFF17 0.77 -1.7 15,449 - GFF17 0.77 -1.6
Or see this region's nucleotide sequence