Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03777

Experiment: T3 MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_03776 and OHPLBJKB_03777 are separated by 94 nucleotidesOHPLBJKB_03777 and OHPLBJKB_03778 overlap by 1 nucleotides OHPLBJKB_03776: OHPLBJKB_03776 - Cytosol aminopeptidase, at 3,963,890 to 3,965,401 _03776 OHPLBJKB_03777: OHPLBJKB_03777 - DNA polymerase III subunit chi, at 3,965,496 to 3,965,978 _03777 OHPLBJKB_03778: OHPLBJKB_03778 - Valine--tRNA ligase, at 3,965,978 to 3,968,833 _03778 Position (kb) 3965 3966Strain fitness (log2 ratio) -2 -1 0 1at 3964.529 kb on + strand, within OHPLBJKB_03776at 3964.529 kb on + strand, within OHPLBJKB_03776at 3964.530 kb on - strand, within OHPLBJKB_03776at 3964.530 kb on - strand, within OHPLBJKB_03776at 3964.530 kb on - strand, within OHPLBJKB_03776at 3964.649 kb on + strand, within OHPLBJKB_03776at 3964.763 kb on + strand, within OHPLBJKB_03776at 3964.763 kb on + strand, within OHPLBJKB_03776at 3964.763 kb on + strand, within OHPLBJKB_03776at 3964.763 kb on + strand, within OHPLBJKB_03776at 3964.764 kb on - strand, within OHPLBJKB_03776at 3964.768 kb on + strand, within OHPLBJKB_03776at 3964.768 kb on + strand, within OHPLBJKB_03776at 3964.768 kb on + strand, within OHPLBJKB_03776at 3964.768 kb on + strand, within OHPLBJKB_03776at 3964.768 kb on + strand, within OHPLBJKB_03776at 3964.769 kb on - strand, within OHPLBJKB_03776at 3964.769 kb on - strand, within OHPLBJKB_03776at 3964.818 kb on + strand, within OHPLBJKB_03776at 3964.818 kb on + strand, within OHPLBJKB_03776at 3964.818 kb on + strand, within OHPLBJKB_03776at 3964.963 kb on - strand, within OHPLBJKB_03776at 3964.978 kb on - strand, within OHPLBJKB_03776at 3964.978 kb on - strand, within OHPLBJKB_03776at 3964.982 kb on + strand, within OHPLBJKB_03776at 3964.982 kb on + strand, within OHPLBJKB_03776at 3964.982 kb on + strand, within OHPLBJKB_03776at 3964.983 kb on - strand, within OHPLBJKB_03776at 3964.983 kb on - strand, within OHPLBJKB_03776at 3964.983 kb on - strand, within OHPLBJKB_03776at 3964.983 kb on - strand, within OHPLBJKB_03776at 3964.983 kb on - strand, within OHPLBJKB_03776at 3964.983 kb on - strand, within OHPLBJKB_03776at 3964.983 kb on - strand, within OHPLBJKB_03776at 3964.983 kb on - strand, within OHPLBJKB_03776at 3965.165 kb on + strand, within OHPLBJKB_03776at 3965.166 kb on - strand, within OHPLBJKB_03776at 3965.267 kb on - strandat 3965.270 kb on + strandat 3965.270 kb on + strandat 3965.270 kb on + strandat 3965.270 kb on + strandat 3965.270 kb on + strandat 3965.270 kb on + strandat 3965.271 kb on - strandat 3965.370 kb on + strandat 3965.399 kb on + strandat 3965.400 kb on - strandat 3965.400 kb on - strandat 3965.412 kb on + strandat 3965.412 kb on + strandat 3965.413 kb on - strandat 3965.464 kb on - strandat 3965.485 kb on + strandat 3965.485 kb on + strandat 3965.485 kb on + strandat 3965.505 kb on + strandat 3965.506 kb on - strandat 3965.509 kb on + strandat 3965.510 kb on - strandat 3965.553 kb on + strand, within OHPLBJKB_03777at 3965.553 kb on + strand, within OHPLBJKB_03777at 3965.553 kb on + strand, within OHPLBJKB_03777at 3965.554 kb on - strand, within OHPLBJKB_03777at 3965.554 kb on - strand, within OHPLBJKB_03777at 3965.587 kb on + strand, within OHPLBJKB_03777at 3965.587 kb on + strand, within OHPLBJKB_03777at 3965.588 kb on - strand, within OHPLBJKB_03777at 3965.588 kb on - strand, within OHPLBJKB_03777at 3965.683 kb on - strand, within OHPLBJKB_03777at 3965.816 kb on + strand, within OHPLBJKB_03777at 3965.817 kb on - strand, within OHPLBJKB_03777at 3965.818 kb on + strand, within OHPLBJKB_03777at 3965.819 kb on - strand, within OHPLBJKB_03777at 3965.819 kb on - strand, within OHPLBJKB_03777at 3965.819 kb on - strand, within OHPLBJKB_03777at 3965.819 kb on - strand, within OHPLBJKB_03777at 3965.819 kb on - strand, within OHPLBJKB_03777at 3965.819 kb on - strand, within OHPLBJKB_03777at 3965.826 kb on - strand, within OHPLBJKB_03777at 3965.826 kb on - strand, within OHPLBJKB_03777at 3965.875 kb on + strand, within OHPLBJKB_03777

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Per-strain Table

Position Strand Gene LocusTag Fraction T3 MOI1
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3,964,529 + OHPLBJKB_03776 0.42 -1.4
3,964,529 + OHPLBJKB_03776 0.42 -1.1
3,964,530 - OHPLBJKB_03776 0.42 -0.2
3,964,530 - OHPLBJKB_03776 0.42 +0.6
3,964,530 - OHPLBJKB_03776 0.42 -0.7
3,964,649 + OHPLBJKB_03776 0.50 +0.1
3,964,763 + OHPLBJKB_03776 0.58 -0.1
3,964,763 + OHPLBJKB_03776 0.58 +0.7
3,964,763 + OHPLBJKB_03776 0.58 +1.0
3,964,763 + OHPLBJKB_03776 0.58 -0.6
3,964,764 - OHPLBJKB_03776 0.58 -0.9
3,964,768 + OHPLBJKB_03776 0.58 -0.2
3,964,768 + OHPLBJKB_03776 0.58 -0.2
3,964,768 + OHPLBJKB_03776 0.58 -0.7
3,964,768 + OHPLBJKB_03776 0.58 +0.3
3,964,768 + OHPLBJKB_03776 0.58 -0.3
3,964,769 - OHPLBJKB_03776 0.58 -1.7
3,964,769 - OHPLBJKB_03776 0.58 +0.4
3,964,818 + OHPLBJKB_03776 0.61 +1.2
3,964,818 + OHPLBJKB_03776 0.61 +0.4
3,964,818 + OHPLBJKB_03776 0.61 -0.1
3,964,963 - OHPLBJKB_03776 0.71 +0.8
3,964,978 - OHPLBJKB_03776 0.72 +1.2
3,964,978 - OHPLBJKB_03776 0.72 +0.4
3,964,982 + OHPLBJKB_03776 0.72 +0.6
3,964,982 + OHPLBJKB_03776 0.72 +0.9
3,964,982 + OHPLBJKB_03776 0.72 -0.3
3,964,983 - OHPLBJKB_03776 0.72 +0.2
3,964,983 - OHPLBJKB_03776 0.72 +1.0
3,964,983 - OHPLBJKB_03776 0.72 -0.9
3,964,983 - OHPLBJKB_03776 0.72 -0.7
3,964,983 - OHPLBJKB_03776 0.72 -1.2
3,964,983 - OHPLBJKB_03776 0.72 +1.0
3,964,983 - OHPLBJKB_03776 0.72 -1.6
3,964,983 - OHPLBJKB_03776 0.72 -0.6
3,965,165 + OHPLBJKB_03776 0.84 +0.7
3,965,166 - OHPLBJKB_03776 0.84 +0.6
3,965,267 - -0.3
3,965,270 + -0.2
3,965,270 + +0.2
3,965,270 + +0.9
3,965,270 + -0.0
3,965,270 + +0.3
3,965,270 + -0.1
3,965,271 - +0.0
3,965,370 + +0.0
3,965,399 + +0.1
3,965,400 - -0.1
3,965,400 - -0.5
3,965,412 + +0.3
3,965,412 + -0.8
3,965,413 - +1.2
3,965,464 - -1.3
3,965,485 + +0.6
3,965,485 + +0.7
3,965,485 + +0.0
3,965,505 + -0.2
3,965,506 - -0.8
3,965,509 + -0.9
3,965,510 - -0.4
3,965,553 + OHPLBJKB_03777 0.12 -0.2
3,965,553 + OHPLBJKB_03777 0.12 -0.1
3,965,553 + OHPLBJKB_03777 0.12 +0.9
3,965,554 - OHPLBJKB_03777 0.12 -0.5
3,965,554 - OHPLBJKB_03777 0.12 -1.3
3,965,587 + OHPLBJKB_03777 0.19 -0.8
3,965,587 + OHPLBJKB_03777 0.19 -1.2
3,965,588 - OHPLBJKB_03777 0.19 -0.7
3,965,588 - OHPLBJKB_03777 0.19 -0.1
3,965,683 - OHPLBJKB_03777 0.39 -2.6
3,965,816 + OHPLBJKB_03777 0.66 -0.0
3,965,817 - OHPLBJKB_03777 0.66 -0.2
3,965,818 + OHPLBJKB_03777 0.67 -0.9
3,965,819 - OHPLBJKB_03777 0.67 +0.6
3,965,819 - OHPLBJKB_03777 0.67 -1.4
3,965,819 - OHPLBJKB_03777 0.67 +0.7
3,965,819 - OHPLBJKB_03777 0.67 -1.1
3,965,819 - OHPLBJKB_03777 0.67 -0.3
3,965,819 - OHPLBJKB_03777 0.67 -0.0
3,965,826 - OHPLBJKB_03777 0.68 -0.5
3,965,826 - OHPLBJKB_03777 0.68 +0.1
3,965,875 + OHPLBJKB_03777 0.78 -0.7

Or see this region's nucleotide sequence