Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04327

Experiment: N4 MOI10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_04326 and OHPLBJKB_04327 overlap by 1 nucleotidesOHPLBJKB_04327 and OHPLBJKB_04328 are separated by 182 nucleotidesOHPLBJKB_04328 and OHPLBJKB_04329 are separated by 14 nucleotides OHPLBJKB_04326: OHPLBJKB_04326 - Phosphate transport system permease protein PstC, at 4,548,421 to 4,549,380 _04326 OHPLBJKB_04327: OHPLBJKB_04327 - Phosphate transport system permease protein PstA, at 4,549,380 to 4,550,270 _04327 OHPLBJKB_04328: OHPLBJKB_04328 - Phosphate import ATP-binding protein PstB, at 4,550,453 to 4,551,226 _04328 OHPLBJKB_04329: OHPLBJKB_04329 - Phosphate-specific transport system accessory protein PhoU, at 4,551,241 to 4,551,966 _04329 Position (kb) 4549 4550 4551Strain fitness (log2 ratio) -2 -1 0 1at 4548.404 kb on + strandat 4548.415 kb on + strandat 4548.420 kb on + strandat 4548.531 kb on + strand, within OHPLBJKB_04326at 4548.792 kb on + strand, within OHPLBJKB_04326at 4548.867 kb on + strand, within OHPLBJKB_04326at 4548.867 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.202 kb on - strand, within OHPLBJKB_04326at 4549.202 kb on - strand, within OHPLBJKB_04326at 4549.203 kb on + strand, within OHPLBJKB_04326at 4549.203 kb on + strand, within OHPLBJKB_04326at 4549.203 kb on + strand, within OHPLBJKB_04326at 4549.218 kb on + strand, within OHPLBJKB_04326at 4549.218 kb on + strand, within OHPLBJKB_04326at 4549.218 kb on + strand, within OHPLBJKB_04326at 4549.311 kb on + strandat 4549.311 kb on + strandat 4549.312 kb on - strandat 4549.385 kb on + strandat 4549.525 kb on + strand, within OHPLBJKB_04327at 4549.525 kb on + strand, within OHPLBJKB_04327at 4549.556 kb on + strand, within OHPLBJKB_04327at 4549.556 kb on + strand, within OHPLBJKB_04327at 4549.698 kb on + strand, within OHPLBJKB_04327at 4549.698 kb on + strand, within OHPLBJKB_04327at 4549.718 kb on + strand, within OHPLBJKB_04327at 4549.718 kb on + strand, within OHPLBJKB_04327at 4549.941 kb on + strand, within OHPLBJKB_04327at 4550.141 kb on + strand, within OHPLBJKB_04327at 4550.352 kb on + strandat 4550.352 kb on + strandat 4550.352 kb on + strandat 4550.405 kb on + strandat 4551.059 kb on + strand, within OHPLBJKB_04328at 4551.203 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction N4 MOI10
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4,548,404 + -0.0
4,548,415 + -0.1
4,548,420 + -0.5
4,548,531 + OHPLBJKB_04326 0.11 -0.5
4,548,792 + OHPLBJKB_04326 0.39 -0.5
4,548,867 + OHPLBJKB_04326 0.46 +0.1
4,548,867 + OHPLBJKB_04326 0.46 -0.6
4,549,201 + OHPLBJKB_04326 0.81 -1.8
4,549,201 + OHPLBJKB_04326 0.81 +0.7
4,549,201 + OHPLBJKB_04326 0.81 -0.0
4,549,201 + OHPLBJKB_04326 0.81 -1.0
4,549,201 + OHPLBJKB_04326 0.81 +0.6
4,549,202 - OHPLBJKB_04326 0.81 -0.2
4,549,202 - OHPLBJKB_04326 0.81 +0.3
4,549,203 + OHPLBJKB_04326 0.81 +0.3
4,549,203 + OHPLBJKB_04326 0.81 -0.6
4,549,203 + OHPLBJKB_04326 0.81 +0.1
4,549,218 + OHPLBJKB_04326 0.83 -2.0
4,549,218 + OHPLBJKB_04326 0.83 -0.9
4,549,218 + OHPLBJKB_04326 0.83 -1.2
4,549,311 + +0.5
4,549,311 + -0.9
4,549,312 - -0.5
4,549,385 + -0.2
4,549,525 + OHPLBJKB_04327 0.16 -1.2
4,549,525 + OHPLBJKB_04327 0.16 +0.6
4,549,556 + OHPLBJKB_04327 0.20 -1.8
4,549,556 + OHPLBJKB_04327 0.20 -0.4
4,549,698 + OHPLBJKB_04327 0.36 -0.8
4,549,698 + OHPLBJKB_04327 0.36 +0.3
4,549,718 + OHPLBJKB_04327 0.38 -2.2
4,549,718 + OHPLBJKB_04327 0.38 -1.7
4,549,941 + OHPLBJKB_04327 0.63 -1.6
4,550,141 + OHPLBJKB_04327 0.85 -0.0
4,550,352 + -0.2
4,550,352 + +0.7
4,550,352 + -0.2
4,550,405 + +0.4
4,551,059 + OHPLBJKB_04328 0.78 -1.1
4,551,203 + -1.2

Or see this region's nucleotide sequence