Experiment: N4 MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_04326 and OHPLBJKB_04327 overlap by 1 nucleotides OHPLBJKB_04327 and OHPLBJKB_04328 are separated by 182 nucleotides OHPLBJKB_04328 and OHPLBJKB_04329 are separated by 14 nucleotides
OHPLBJKB_04326: OHPLBJKB_04326 - Phosphate transport system permease protein PstC, at 4,548,421 to 4,549,380
_04326
OHPLBJKB_04327: OHPLBJKB_04327 - Phosphate transport system permease protein PstA, at 4,549,380 to 4,550,270
_04327
OHPLBJKB_04328: OHPLBJKB_04328 - Phosphate import ATP-binding protein PstB, at 4,550,453 to 4,551,226
_04328
OHPLBJKB_04329: OHPLBJKB_04329 - Phosphate-specific transport system accessory protein PhoU, at 4,551,241 to 4,551,966
_04329
Position (kb)
4549
4550
4551 Strain fitness (log2 ratio)
-2
-1
0
1 at 4548.404 kb on + strand at 4548.415 kb on + strand at 4548.420 kb on + strand at 4548.531 kb on + strand, within OHPLBJKB_04326 at 4548.792 kb on + strand, within OHPLBJKB_04326 at 4548.867 kb on + strand, within OHPLBJKB_04326 at 4548.867 kb on + strand, within OHPLBJKB_04326 at 4549.201 kb on + strand, within OHPLBJKB_04326 at 4549.201 kb on + strand, within OHPLBJKB_04326 at 4549.201 kb on + strand, within OHPLBJKB_04326 at 4549.201 kb on + strand, within OHPLBJKB_04326 at 4549.201 kb on + strand, within OHPLBJKB_04326 at 4549.202 kb on - strand, within OHPLBJKB_04326 at 4549.202 kb on - strand, within OHPLBJKB_04326 at 4549.203 kb on + strand, within OHPLBJKB_04326 at 4549.203 kb on + strand, within OHPLBJKB_04326 at 4549.203 kb on + strand, within OHPLBJKB_04326 at 4549.218 kb on + strand, within OHPLBJKB_04326 at 4549.218 kb on + strand, within OHPLBJKB_04326 at 4549.218 kb on + strand, within OHPLBJKB_04326 at 4549.311 kb on + strand at 4549.311 kb on + strand at 4549.312 kb on - strand at 4549.385 kb on + strand at 4549.525 kb on + strand, within OHPLBJKB_04327 at 4549.525 kb on + strand, within OHPLBJKB_04327 at 4549.556 kb on + strand, within OHPLBJKB_04327 at 4549.556 kb on + strand, within OHPLBJKB_04327 at 4549.698 kb on + strand, within OHPLBJKB_04327 at 4549.698 kb on + strand, within OHPLBJKB_04327 at 4549.718 kb on + strand, within OHPLBJKB_04327 at 4549.718 kb on + strand, within OHPLBJKB_04327 at 4549.941 kb on + strand, within OHPLBJKB_04327 at 4550.141 kb on + strand, within OHPLBJKB_04327 at 4550.352 kb on + strand at 4550.352 kb on + strand at 4550.352 kb on + strand at 4550.405 kb on + strand at 4551.059 kb on + strand, within OHPLBJKB_04328 at 4551.203 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 MOI10 remove 4,548,404 + -0.0 4,548,415 + -0.1 4,548,420 + -0.5 4,548,531 + OHPLBJKB_04326 0.11 -0.5 4,548,792 + OHPLBJKB_04326 0.39 -0.5 4,548,867 + OHPLBJKB_04326 0.46 +0.1 4,548,867 + OHPLBJKB_04326 0.46 -0.6 4,549,201 + OHPLBJKB_04326 0.81 -1.8 4,549,201 + OHPLBJKB_04326 0.81 +0.7 4,549,201 + OHPLBJKB_04326 0.81 -0.0 4,549,201 + OHPLBJKB_04326 0.81 -1.0 4,549,201 + OHPLBJKB_04326 0.81 +0.6 4,549,202 - OHPLBJKB_04326 0.81 -0.2 4,549,202 - OHPLBJKB_04326 0.81 +0.3 4,549,203 + OHPLBJKB_04326 0.81 +0.3 4,549,203 + OHPLBJKB_04326 0.81 -0.6 4,549,203 + OHPLBJKB_04326 0.81 +0.1 4,549,218 + OHPLBJKB_04326 0.83 -2.0 4,549,218 + OHPLBJKB_04326 0.83 -0.9 4,549,218 + OHPLBJKB_04326 0.83 -1.2 4,549,311 + +0.5 4,549,311 + -0.9 4,549,312 - -0.5 4,549,385 + -0.2 4,549,525 + OHPLBJKB_04327 0.16 -1.2 4,549,525 + OHPLBJKB_04327 0.16 +0.6 4,549,556 + OHPLBJKB_04327 0.20 -1.8 4,549,556 + OHPLBJKB_04327 0.20 -0.4 4,549,698 + OHPLBJKB_04327 0.36 -0.8 4,549,698 + OHPLBJKB_04327 0.36 +0.3 4,549,718 + OHPLBJKB_04327 0.38 -2.2 4,549,718 + OHPLBJKB_04327 0.38 -1.7 4,549,941 + OHPLBJKB_04327 0.63 -1.6 4,550,141 + OHPLBJKB_04327 0.85 -0.0 4,550,352 + -0.2 4,550,352 + +0.7 4,550,352 + -0.2 4,550,405 + +0.4 4,551,059 + OHPLBJKB_04328 0.78 -1.1 4,551,203 + -1.2
Or see this region's nucleotide sequence