Experiment: N4 MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02830 and OHPLBJKB_02831 overlap by 4 nucleotides OHPLBJKB_02831 and OHPLBJKB_02832 overlap by 8 nucleotides OHPLBJKB_02832 and OHPLBJKB_02833 overlap by 14 nucleotides
OHPLBJKB_02830: OHPLBJKB_02830 - hypothetical protein, at 2,962,107 to 2,963,858
_02830
OHPLBJKB_02831: OHPLBJKB_02831 - hypothetical protein, at 2,963,855 to 2,964,460
_02831
OHPLBJKB_02832: OHPLBJKB_02832 - hypothetical protein, at 2,964,453 to 2,965,361
_02832
OHPLBJKB_02833: OHPLBJKB_02833 - hypothetical protein, at 2,965,348 to 2,965,707
_02833
Position (kb)
2963
2964
2965 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2962.924 kb on + strand, within OHPLBJKB_02830 at 2962.925 kb on - strand, within OHPLBJKB_02830 at 2962.925 kb on - strand, within OHPLBJKB_02830 at 2962.925 kb on - strand, within OHPLBJKB_02830 at 2962.926 kb on + strand, within OHPLBJKB_02830 at 2962.926 kb on + strand, within OHPLBJKB_02830 at 2962.926 kb on + strand, within OHPLBJKB_02830 at 2962.926 kb on + strand, within OHPLBJKB_02830 at 2962.926 kb on + strand, within OHPLBJKB_02830 at 2962.926 kb on + strand, within OHPLBJKB_02830 at 2962.926 kb on + strand, within OHPLBJKB_02830 at 2962.926 kb on + strand, within OHPLBJKB_02830 at 2962.926 kb on + strand, within OHPLBJKB_02830 at 2962.927 kb on - strand, within OHPLBJKB_02830 at 2962.927 kb on - strand, within OHPLBJKB_02830 at 2962.927 kb on - strand, within OHPLBJKB_02830 at 2962.927 kb on - strand, within OHPLBJKB_02830 at 2962.927 kb on - strand, within OHPLBJKB_02830 at 2962.927 kb on - strand, within OHPLBJKB_02830 at 2962.927 kb on - strand, within OHPLBJKB_02830 at 2962.977 kb on - strand, within OHPLBJKB_02830 at 2962.977 kb on - strand, within OHPLBJKB_02830 at 2962.980 kb on - strand, within OHPLBJKB_02830 at 2962.980 kb on - strand, within OHPLBJKB_02830 at 2963.038 kb on - strand, within OHPLBJKB_02830 at 2963.093 kb on - strand, within OHPLBJKB_02830 at 2963.260 kb on + strand, within OHPLBJKB_02830 at 2963.261 kb on - strand, within OHPLBJKB_02830 at 2963.261 kb on - strand, within OHPLBJKB_02830 at 2963.261 kb on - strand, within OHPLBJKB_02830 at 2963.325 kb on + strand, within OHPLBJKB_02830 at 2963.392 kb on - strand, within OHPLBJKB_02830 at 2963.407 kb on + strand, within OHPLBJKB_02830 at 2963.407 kb on + strand, within OHPLBJKB_02830 at 2963.407 kb on + strand, within OHPLBJKB_02830 at 2963.407 kb on + strand, within OHPLBJKB_02830 at 2963.407 kb on + strand, within OHPLBJKB_02830 at 2963.408 kb on - strand, within OHPLBJKB_02830 at 2963.408 kb on - strand, within OHPLBJKB_02830 at 2963.453 kb on + strand, within OHPLBJKB_02830 at 2963.463 kb on - strand, within OHPLBJKB_02830 at 2963.530 kb on + strand, within OHPLBJKB_02830 at 2963.530 kb on + strand, within OHPLBJKB_02830 at 2963.530 kb on + strand, within OHPLBJKB_02830 at 2963.531 kb on - strand, within OHPLBJKB_02830 at 2963.595 kb on + strand, within OHPLBJKB_02830 at 2963.596 kb on - strand, within OHPLBJKB_02830 at 2963.596 kb on - strand, within OHPLBJKB_02830 at 2963.668 kb on + strand, within OHPLBJKB_02830 at 2963.668 kb on + strand, within OHPLBJKB_02830 at 2963.669 kb on - strand, within OHPLBJKB_02830 at 2963.669 kb on - strand, within OHPLBJKB_02830 at 2963.669 kb on - strand, within OHPLBJKB_02830 at 2963.669 kb on - strand, within OHPLBJKB_02830 at 2963.669 kb on - strand, within OHPLBJKB_02830 at 2963.669 kb on - strand, within OHPLBJKB_02830 at 2963.676 kb on - strand, within OHPLBJKB_02830 at 2963.676 kb on - strand, within OHPLBJKB_02830 at 2963.737 kb on - strand at 2963.882 kb on - strand at 2963.924 kb on - strand, within OHPLBJKB_02831 at 2963.970 kb on + strand, within OHPLBJKB_02831 at 2964.040 kb on + strand, within OHPLBJKB_02831 at 2964.041 kb on - strand, within OHPLBJKB_02831 at 2964.041 kb on - strand, within OHPLBJKB_02831 at 2964.041 kb on - strand, within OHPLBJKB_02831 at 2964.081 kb on + strand, within OHPLBJKB_02831 at 2964.082 kb on - strand, within OHPLBJKB_02831 at 2964.082 kb on - strand, within OHPLBJKB_02831 at 2964.082 kb on - strand, within OHPLBJKB_02831 at 2964.085 kb on + strand, within OHPLBJKB_02831 at 2964.085 kb on + strand, within OHPLBJKB_02831 at 2964.085 kb on + strand, within OHPLBJKB_02831 at 2964.085 kb on + strand, within OHPLBJKB_02831 at 2964.086 kb on - strand, within OHPLBJKB_02831 at 2964.227 kb on - strand, within OHPLBJKB_02831 at 2964.241 kb on - strand, within OHPLBJKB_02831 at 2964.241 kb on - strand, within OHPLBJKB_02831 at 2964.257 kb on + strand, within OHPLBJKB_02831 at 2964.324 kb on + strand, within OHPLBJKB_02831 at 2964.325 kb on - strand, within OHPLBJKB_02831 at 2964.491 kb on + strand at 2964.491 kb on + strand at 2964.492 kb on - strand at 2964.492 kb on - strand at 2964.492 kb on - strand at 2964.492 kb on - strand at 2964.492 kb on - strand at 2964.492 kb on - strand at 2964.634 kb on + strand, within OHPLBJKB_02832 at 2964.635 kb on - strand, within OHPLBJKB_02832 at 2964.635 kb on - strand, within OHPLBJKB_02832 at 2964.635 kb on - strand, within OHPLBJKB_02832 at 2964.635 kb on - strand, within OHPLBJKB_02832 at 2964.931 kb on + strand, within OHPLBJKB_02832 at 2964.931 kb on + strand, within OHPLBJKB_02832 at 2964.932 kb on - strand, within OHPLBJKB_02832 at 2964.932 kb on - strand, within OHPLBJKB_02832 at 2965.075 kb on + strand, within OHPLBJKB_02832 at 2965.075 kb on + strand, within OHPLBJKB_02832 at 2965.075 kb on + strand, within OHPLBJKB_02832 at 2965.075 kb on + strand, within OHPLBJKB_02832 at 2965.076 kb on - strand, within OHPLBJKB_02832 at 2965.076 kb on - strand, within OHPLBJKB_02832 at 2965.076 kb on - strand, within OHPLBJKB_02832 at 2965.434 kb on + strand, within OHPLBJKB_02833 at 2965.434 kb on + strand, within OHPLBJKB_02833 at 2965.435 kb on - strand, within OHPLBJKB_02833 at 2965.435 kb on - strand, within OHPLBJKB_02833 at 2965.435 kb on - strand, within OHPLBJKB_02833 at 2965.435 kb on - strand, within OHPLBJKB_02833 at 2965.435 kb on - strand, within OHPLBJKB_02833 at 2965.435 kb on - strand, within OHPLBJKB_02833
Per-strain Table
Position Strand Gene LocusTag Fraction N4 MOI10 remove 2,962,924 + OHPLBJKB_02830 0.47 -0.8 2,962,925 - OHPLBJKB_02830 0.47 -0.3 2,962,925 - OHPLBJKB_02830 0.47 -0.5 2,962,925 - OHPLBJKB_02830 0.47 +1.8 2,962,926 + OHPLBJKB_02830 0.47 +0.3 2,962,926 + OHPLBJKB_02830 0.47 -0.3 2,962,926 + OHPLBJKB_02830 0.47 +0.0 2,962,926 + OHPLBJKB_02830 0.47 +0.5 2,962,926 + OHPLBJKB_02830 0.47 -0.1 2,962,926 + OHPLBJKB_02830 0.47 -0.4 2,962,926 + OHPLBJKB_02830 0.47 +0.0 2,962,926 + OHPLBJKB_02830 0.47 +1.7 2,962,926 + OHPLBJKB_02830 0.47 -0.5 2,962,927 - OHPLBJKB_02830 0.47 -0.0 2,962,927 - OHPLBJKB_02830 0.47 -0.1 2,962,927 - OHPLBJKB_02830 0.47 -0.0 2,962,927 - OHPLBJKB_02830 0.47 -0.7 2,962,927 - OHPLBJKB_02830 0.47 -0.2 2,962,927 - OHPLBJKB_02830 0.47 +0.8 2,962,927 - OHPLBJKB_02830 0.47 -1.0 2,962,977 - OHPLBJKB_02830 0.50 +0.2 2,962,977 - OHPLBJKB_02830 0.50 -1.1 2,962,980 - OHPLBJKB_02830 0.50 -0.3 2,962,980 - OHPLBJKB_02830 0.50 +0.8 2,963,038 - OHPLBJKB_02830 0.53 +0.4 2,963,093 - OHPLBJKB_02830 0.56 +0.5 2,963,260 + OHPLBJKB_02830 0.66 +0.4 2,963,261 - OHPLBJKB_02830 0.66 +0.4 2,963,261 - OHPLBJKB_02830 0.66 -0.2 2,963,261 - OHPLBJKB_02830 0.66 +0.3 2,963,325 + OHPLBJKB_02830 0.70 -0.9 2,963,392 - OHPLBJKB_02830 0.73 -0.4 2,963,407 + OHPLBJKB_02830 0.74 -0.3 2,963,407 + OHPLBJKB_02830 0.74 -0.9 2,963,407 + OHPLBJKB_02830 0.74 +0.3 2,963,407 + OHPLBJKB_02830 0.74 -0.1 2,963,407 + OHPLBJKB_02830 0.74 -0.9 2,963,408 - OHPLBJKB_02830 0.74 +0.1 2,963,408 - OHPLBJKB_02830 0.74 +0.9 2,963,453 + OHPLBJKB_02830 0.77 +0.3 2,963,463 - OHPLBJKB_02830 0.77 +0.0 2,963,530 + OHPLBJKB_02830 0.81 -0.2 2,963,530 + OHPLBJKB_02830 0.81 -0.4 2,963,530 + OHPLBJKB_02830 0.81 -0.1 2,963,531 - OHPLBJKB_02830 0.81 +1.2 2,963,595 + OHPLBJKB_02830 0.85 -0.5 2,963,596 - OHPLBJKB_02830 0.85 -1.3 2,963,596 - OHPLBJKB_02830 0.85 -0.0 2,963,668 + OHPLBJKB_02830 0.89 -1.7 2,963,668 + OHPLBJKB_02830 0.89 +0.3 2,963,669 - OHPLBJKB_02830 0.89 +0.5 2,963,669 - OHPLBJKB_02830 0.89 -0.5 2,963,669 - OHPLBJKB_02830 0.89 -1.2 2,963,669 - OHPLBJKB_02830 0.89 -0.5 2,963,669 - OHPLBJKB_02830 0.89 +0.9 2,963,669 - OHPLBJKB_02830 0.89 +0.1 2,963,676 - OHPLBJKB_02830 0.90 +0.7 2,963,676 - OHPLBJKB_02830 0.90 +0.5 2,963,737 - +1.0 2,963,882 - -1.8 2,963,924 - OHPLBJKB_02831 0.11 -0.6 2,963,970 + OHPLBJKB_02831 0.19 -0.0 2,964,040 + OHPLBJKB_02831 0.31 +0.4 2,964,041 - OHPLBJKB_02831 0.31 -0.3 2,964,041 - OHPLBJKB_02831 0.31 -0.3 2,964,041 - OHPLBJKB_02831 0.31 -0.5 2,964,081 + OHPLBJKB_02831 0.37 +0.2 2,964,082 - OHPLBJKB_02831 0.37 -0.8 2,964,082 - OHPLBJKB_02831 0.37 -0.3 2,964,082 - OHPLBJKB_02831 0.37 -0.2 2,964,085 + OHPLBJKB_02831 0.38 -2.1 2,964,085 + OHPLBJKB_02831 0.38 -0.5 2,964,085 + OHPLBJKB_02831 0.38 +0.4 2,964,085 + OHPLBJKB_02831 0.38 -0.8 2,964,086 - OHPLBJKB_02831 0.38 -1.1 2,964,227 - OHPLBJKB_02831 0.61 -0.1 2,964,241 - OHPLBJKB_02831 0.64 -0.7 2,964,241 - OHPLBJKB_02831 0.64 -1.0 2,964,257 + OHPLBJKB_02831 0.66 +0.1 2,964,324 + OHPLBJKB_02831 0.77 -0.3 2,964,325 - OHPLBJKB_02831 0.78 -0.8 2,964,491 + +1.0 2,964,491 + -1.0 2,964,492 - +0.3 2,964,492 - -0.2 2,964,492 - -0.9 2,964,492 - +0.1 2,964,492 - -0.2 2,964,492 - -0.2 2,964,634 + OHPLBJKB_02832 0.20 -0.2 2,964,635 - OHPLBJKB_02832 0.20 +0.6 2,964,635 - OHPLBJKB_02832 0.20 +0.0 2,964,635 - OHPLBJKB_02832 0.20 +0.7 2,964,635 - OHPLBJKB_02832 0.20 +0.1 2,964,931 + OHPLBJKB_02832 0.53 +0.4 2,964,931 + OHPLBJKB_02832 0.53 +0.0 2,964,932 - OHPLBJKB_02832 0.53 -0.1 2,964,932 - OHPLBJKB_02832 0.53 +0.8 2,965,075 + OHPLBJKB_02832 0.68 +0.8 2,965,075 + OHPLBJKB_02832 0.68 +0.4 2,965,075 + OHPLBJKB_02832 0.68 -0.2 2,965,075 + OHPLBJKB_02832 0.68 +0.5 2,965,076 - OHPLBJKB_02832 0.69 -0.9 2,965,076 - OHPLBJKB_02832 0.69 -0.5 2,965,076 - OHPLBJKB_02832 0.69 +0.5 2,965,434 + OHPLBJKB_02833 0.24 -0.5 2,965,434 + OHPLBJKB_02833 0.24 +0.1 2,965,435 - OHPLBJKB_02833 0.24 -0.1 2,965,435 - OHPLBJKB_02833 0.24 +0.1 2,965,435 - OHPLBJKB_02833 0.24 -0.2 2,965,435 - OHPLBJKB_02833 0.24 +0.2 2,965,435 - OHPLBJKB_02833 0.24 +0.3 2,965,435 - OHPLBJKB_02833 0.24 +0.9
Or see this region's nucleotide sequence