Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02831

Experiment: N4 MOI10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02830 and OHPLBJKB_02831 overlap by 4 nucleotidesOHPLBJKB_02831 and OHPLBJKB_02832 overlap by 8 nucleotidesOHPLBJKB_02832 and OHPLBJKB_02833 overlap by 14 nucleotides OHPLBJKB_02830: OHPLBJKB_02830 - hypothetical protein, at 2,962,107 to 2,963,858 _02830 OHPLBJKB_02831: OHPLBJKB_02831 - hypothetical protein, at 2,963,855 to 2,964,460 _02831 OHPLBJKB_02832: OHPLBJKB_02832 - hypothetical protein, at 2,964,453 to 2,965,361 _02832 OHPLBJKB_02833: OHPLBJKB_02833 - hypothetical protein, at 2,965,348 to 2,965,707 _02833 Position (kb) 2963 2964 2965Strain fitness (log2 ratio) -2 -1 0 1 2at 2962.924 kb on + strand, within OHPLBJKB_02830at 2962.925 kb on - strand, within OHPLBJKB_02830at 2962.925 kb on - strand, within OHPLBJKB_02830at 2962.925 kb on - strand, within OHPLBJKB_02830at 2962.926 kb on + strand, within OHPLBJKB_02830at 2962.926 kb on + strand, within OHPLBJKB_02830at 2962.926 kb on + strand, within OHPLBJKB_02830at 2962.926 kb on + strand, within OHPLBJKB_02830at 2962.926 kb on + strand, within OHPLBJKB_02830at 2962.926 kb on + strand, within OHPLBJKB_02830at 2962.926 kb on + strand, within OHPLBJKB_02830at 2962.926 kb on + strand, within OHPLBJKB_02830at 2962.926 kb on + strand, within OHPLBJKB_02830at 2962.927 kb on - strand, within OHPLBJKB_02830at 2962.927 kb on - strand, within OHPLBJKB_02830at 2962.927 kb on - strand, within OHPLBJKB_02830at 2962.927 kb on - strand, within OHPLBJKB_02830at 2962.927 kb on - strand, within OHPLBJKB_02830at 2962.927 kb on - strand, within OHPLBJKB_02830at 2962.927 kb on - strand, within OHPLBJKB_02830at 2962.977 kb on - strand, within OHPLBJKB_02830at 2962.977 kb on - strand, within OHPLBJKB_02830at 2962.980 kb on - strand, within OHPLBJKB_02830at 2962.980 kb on - strand, within OHPLBJKB_02830at 2963.038 kb on - strand, within OHPLBJKB_02830at 2963.093 kb on - strand, within OHPLBJKB_02830at 2963.260 kb on + strand, within OHPLBJKB_02830at 2963.261 kb on - strand, within OHPLBJKB_02830at 2963.261 kb on - strand, within OHPLBJKB_02830at 2963.261 kb on - strand, within OHPLBJKB_02830at 2963.325 kb on + strand, within OHPLBJKB_02830at 2963.392 kb on - strand, within OHPLBJKB_02830at 2963.407 kb on + strand, within OHPLBJKB_02830at 2963.407 kb on + strand, within OHPLBJKB_02830at 2963.407 kb on + strand, within OHPLBJKB_02830at 2963.407 kb on + strand, within OHPLBJKB_02830at 2963.407 kb on + strand, within OHPLBJKB_02830at 2963.408 kb on - strand, within OHPLBJKB_02830at 2963.408 kb on - strand, within OHPLBJKB_02830at 2963.453 kb on + strand, within OHPLBJKB_02830at 2963.463 kb on - strand, within OHPLBJKB_02830at 2963.530 kb on + strand, within OHPLBJKB_02830at 2963.530 kb on + strand, within OHPLBJKB_02830at 2963.530 kb on + strand, within OHPLBJKB_02830at 2963.531 kb on - strand, within OHPLBJKB_02830at 2963.595 kb on + strand, within OHPLBJKB_02830at 2963.596 kb on - strand, within OHPLBJKB_02830at 2963.596 kb on - strand, within OHPLBJKB_02830at 2963.668 kb on + strand, within OHPLBJKB_02830at 2963.668 kb on + strand, within OHPLBJKB_02830at 2963.669 kb on - strand, within OHPLBJKB_02830at 2963.669 kb on - strand, within OHPLBJKB_02830at 2963.669 kb on - strand, within OHPLBJKB_02830at 2963.669 kb on - strand, within OHPLBJKB_02830at 2963.669 kb on - strand, within OHPLBJKB_02830at 2963.669 kb on - strand, within OHPLBJKB_02830at 2963.676 kb on - strand, within OHPLBJKB_02830at 2963.676 kb on - strand, within OHPLBJKB_02830at 2963.737 kb on - strandat 2963.882 kb on - strandat 2963.924 kb on - strand, within OHPLBJKB_02831at 2963.970 kb on + strand, within OHPLBJKB_02831at 2964.040 kb on + strand, within OHPLBJKB_02831at 2964.041 kb on - strand, within OHPLBJKB_02831at 2964.041 kb on - strand, within OHPLBJKB_02831at 2964.041 kb on - strand, within OHPLBJKB_02831at 2964.081 kb on + strand, within OHPLBJKB_02831at 2964.082 kb on - strand, within OHPLBJKB_02831at 2964.082 kb on - strand, within OHPLBJKB_02831at 2964.082 kb on - strand, within OHPLBJKB_02831at 2964.085 kb on + strand, within OHPLBJKB_02831at 2964.085 kb on + strand, within OHPLBJKB_02831at 2964.085 kb on + strand, within OHPLBJKB_02831at 2964.085 kb on + strand, within OHPLBJKB_02831at 2964.086 kb on - strand, within OHPLBJKB_02831at 2964.227 kb on - strand, within OHPLBJKB_02831at 2964.241 kb on - strand, within OHPLBJKB_02831at 2964.241 kb on - strand, within OHPLBJKB_02831at 2964.257 kb on + strand, within OHPLBJKB_02831at 2964.324 kb on + strand, within OHPLBJKB_02831at 2964.325 kb on - strand, within OHPLBJKB_02831at 2964.491 kb on + strandat 2964.491 kb on + strandat 2964.492 kb on - strandat 2964.492 kb on - strandat 2964.492 kb on - strandat 2964.492 kb on - strandat 2964.492 kb on - strandat 2964.492 kb on - strandat 2964.634 kb on + strand, within OHPLBJKB_02832at 2964.635 kb on - strand, within OHPLBJKB_02832at 2964.635 kb on - strand, within OHPLBJKB_02832at 2964.635 kb on - strand, within OHPLBJKB_02832at 2964.635 kb on - strand, within OHPLBJKB_02832at 2964.931 kb on + strand, within OHPLBJKB_02832at 2964.931 kb on + strand, within OHPLBJKB_02832at 2964.932 kb on - strand, within OHPLBJKB_02832at 2964.932 kb on - strand, within OHPLBJKB_02832at 2965.075 kb on + strand, within OHPLBJKB_02832at 2965.075 kb on + strand, within OHPLBJKB_02832at 2965.075 kb on + strand, within OHPLBJKB_02832at 2965.075 kb on + strand, within OHPLBJKB_02832at 2965.076 kb on - strand, within OHPLBJKB_02832at 2965.076 kb on - strand, within OHPLBJKB_02832at 2965.076 kb on - strand, within OHPLBJKB_02832at 2965.434 kb on + strand, within OHPLBJKB_02833at 2965.434 kb on + strand, within OHPLBJKB_02833at 2965.435 kb on - strand, within OHPLBJKB_02833at 2965.435 kb on - strand, within OHPLBJKB_02833at 2965.435 kb on - strand, within OHPLBJKB_02833at 2965.435 kb on - strand, within OHPLBJKB_02833at 2965.435 kb on - strand, within OHPLBJKB_02833at 2965.435 kb on - strand, within OHPLBJKB_02833

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Per-strain Table

Position Strand Gene LocusTag Fraction N4 MOI10
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2,962,924 + OHPLBJKB_02830 0.47 -0.8
2,962,925 - OHPLBJKB_02830 0.47 -0.3
2,962,925 - OHPLBJKB_02830 0.47 -0.5
2,962,925 - OHPLBJKB_02830 0.47 +1.8
2,962,926 + OHPLBJKB_02830 0.47 +0.3
2,962,926 + OHPLBJKB_02830 0.47 -0.3
2,962,926 + OHPLBJKB_02830 0.47 +0.0
2,962,926 + OHPLBJKB_02830 0.47 +0.5
2,962,926 + OHPLBJKB_02830 0.47 -0.1
2,962,926 + OHPLBJKB_02830 0.47 -0.4
2,962,926 + OHPLBJKB_02830 0.47 +0.0
2,962,926 + OHPLBJKB_02830 0.47 +1.7
2,962,926 + OHPLBJKB_02830 0.47 -0.5
2,962,927 - OHPLBJKB_02830 0.47 -0.0
2,962,927 - OHPLBJKB_02830 0.47 -0.1
2,962,927 - OHPLBJKB_02830 0.47 -0.0
2,962,927 - OHPLBJKB_02830 0.47 -0.7
2,962,927 - OHPLBJKB_02830 0.47 -0.2
2,962,927 - OHPLBJKB_02830 0.47 +0.8
2,962,927 - OHPLBJKB_02830 0.47 -1.0
2,962,977 - OHPLBJKB_02830 0.50 +0.2
2,962,977 - OHPLBJKB_02830 0.50 -1.1
2,962,980 - OHPLBJKB_02830 0.50 -0.3
2,962,980 - OHPLBJKB_02830 0.50 +0.8
2,963,038 - OHPLBJKB_02830 0.53 +0.4
2,963,093 - OHPLBJKB_02830 0.56 +0.5
2,963,260 + OHPLBJKB_02830 0.66 +0.4
2,963,261 - OHPLBJKB_02830 0.66 +0.4
2,963,261 - OHPLBJKB_02830 0.66 -0.2
2,963,261 - OHPLBJKB_02830 0.66 +0.3
2,963,325 + OHPLBJKB_02830 0.70 -0.9
2,963,392 - OHPLBJKB_02830 0.73 -0.4
2,963,407 + OHPLBJKB_02830 0.74 -0.3
2,963,407 + OHPLBJKB_02830 0.74 -0.9
2,963,407 + OHPLBJKB_02830 0.74 +0.3
2,963,407 + OHPLBJKB_02830 0.74 -0.1
2,963,407 + OHPLBJKB_02830 0.74 -0.9
2,963,408 - OHPLBJKB_02830 0.74 +0.1
2,963,408 - OHPLBJKB_02830 0.74 +0.9
2,963,453 + OHPLBJKB_02830 0.77 +0.3
2,963,463 - OHPLBJKB_02830 0.77 +0.0
2,963,530 + OHPLBJKB_02830 0.81 -0.2
2,963,530 + OHPLBJKB_02830 0.81 -0.4
2,963,530 + OHPLBJKB_02830 0.81 -0.1
2,963,531 - OHPLBJKB_02830 0.81 +1.2
2,963,595 + OHPLBJKB_02830 0.85 -0.5
2,963,596 - OHPLBJKB_02830 0.85 -1.3
2,963,596 - OHPLBJKB_02830 0.85 -0.0
2,963,668 + OHPLBJKB_02830 0.89 -1.7
2,963,668 + OHPLBJKB_02830 0.89 +0.3
2,963,669 - OHPLBJKB_02830 0.89 +0.5
2,963,669 - OHPLBJKB_02830 0.89 -0.5
2,963,669 - OHPLBJKB_02830 0.89 -1.2
2,963,669 - OHPLBJKB_02830 0.89 -0.5
2,963,669 - OHPLBJKB_02830 0.89 +0.9
2,963,669 - OHPLBJKB_02830 0.89 +0.1
2,963,676 - OHPLBJKB_02830 0.90 +0.7
2,963,676 - OHPLBJKB_02830 0.90 +0.5
2,963,737 - +1.0
2,963,882 - -1.8
2,963,924 - OHPLBJKB_02831 0.11 -0.6
2,963,970 + OHPLBJKB_02831 0.19 -0.0
2,964,040 + OHPLBJKB_02831 0.31 +0.4
2,964,041 - OHPLBJKB_02831 0.31 -0.3
2,964,041 - OHPLBJKB_02831 0.31 -0.3
2,964,041 - OHPLBJKB_02831 0.31 -0.5
2,964,081 + OHPLBJKB_02831 0.37 +0.2
2,964,082 - OHPLBJKB_02831 0.37 -0.8
2,964,082 - OHPLBJKB_02831 0.37 -0.3
2,964,082 - OHPLBJKB_02831 0.37 -0.2
2,964,085 + OHPLBJKB_02831 0.38 -2.1
2,964,085 + OHPLBJKB_02831 0.38 -0.5
2,964,085 + OHPLBJKB_02831 0.38 +0.4
2,964,085 + OHPLBJKB_02831 0.38 -0.8
2,964,086 - OHPLBJKB_02831 0.38 -1.1
2,964,227 - OHPLBJKB_02831 0.61 -0.1
2,964,241 - OHPLBJKB_02831 0.64 -0.7
2,964,241 - OHPLBJKB_02831 0.64 -1.0
2,964,257 + OHPLBJKB_02831 0.66 +0.1
2,964,324 + OHPLBJKB_02831 0.77 -0.3
2,964,325 - OHPLBJKB_02831 0.78 -0.8
2,964,491 + +1.0
2,964,491 + -1.0
2,964,492 - +0.3
2,964,492 - -0.2
2,964,492 - -0.9
2,964,492 - +0.1
2,964,492 - -0.2
2,964,492 - -0.2
2,964,634 + OHPLBJKB_02832 0.20 -0.2
2,964,635 - OHPLBJKB_02832 0.20 +0.6
2,964,635 - OHPLBJKB_02832 0.20 +0.0
2,964,635 - OHPLBJKB_02832 0.20 +0.7
2,964,635 - OHPLBJKB_02832 0.20 +0.1
2,964,931 + OHPLBJKB_02832 0.53 +0.4
2,964,931 + OHPLBJKB_02832 0.53 +0.0
2,964,932 - OHPLBJKB_02832 0.53 -0.1
2,964,932 - OHPLBJKB_02832 0.53 +0.8
2,965,075 + OHPLBJKB_02832 0.68 +0.8
2,965,075 + OHPLBJKB_02832 0.68 +0.4
2,965,075 + OHPLBJKB_02832 0.68 -0.2
2,965,075 + OHPLBJKB_02832 0.68 +0.5
2,965,076 - OHPLBJKB_02832 0.69 -0.9
2,965,076 - OHPLBJKB_02832 0.69 -0.5
2,965,076 - OHPLBJKB_02832 0.69 +0.5
2,965,434 + OHPLBJKB_02833 0.24 -0.5
2,965,434 + OHPLBJKB_02833 0.24 +0.1
2,965,435 - OHPLBJKB_02833 0.24 -0.1
2,965,435 - OHPLBJKB_02833 0.24 +0.1
2,965,435 - OHPLBJKB_02833 0.24 -0.2
2,965,435 - OHPLBJKB_02833 0.24 +0.2
2,965,435 - OHPLBJKB_02833 0.24 +0.3
2,965,435 - OHPLBJKB_02833 0.24 +0.9

Or see this region's nucleotide sequence