Experiment: N4 MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02515 and OHPLBJKB_02516 are separated by 23 nucleotides OHPLBJKB_02516 and OHPLBJKB_02517 are separated by 3 nucleotides
OHPLBJKB_02515: OHPLBJKB_02515 - Septum site-determining protein MinC, at 2,628,115 to 2,628,810
_02515
OHPLBJKB_02516: OHPLBJKB_02516 - Septum site-determining protein MinD, at 2,628,834 to 2,629,646
_02516
OHPLBJKB_02517: OHPLBJKB_02517 - Cell division topological specificity factor, at 2,629,650 to 2,629,916
_02517
Position (kb)
2628
2629
2630 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2627.850 kb on - strand at 2627.904 kb on - strand at 2627.960 kb on + strand at 2627.978 kb on - strand at 2628.029 kb on + strand at 2628.031 kb on + strand at 2628.041 kb on + strand at 2628.043 kb on + strand at 2628.056 kb on - strand at 2628.090 kb on + strand at 2628.090 kb on + strand at 2628.093 kb on + strand at 2628.093 kb on + strand at 2628.097 kb on + strand at 2628.158 kb on + strand at 2628.189 kb on + strand, within OHPLBJKB_02515 at 2628.260 kb on + strand, within OHPLBJKB_02515 at 2628.290 kb on + strand, within OHPLBJKB_02515 at 2628.347 kb on + strand, within OHPLBJKB_02515 at 2628.468 kb on + strand, within OHPLBJKB_02515 at 2628.497 kb on + strand, within OHPLBJKB_02515 at 2628.497 kb on + strand, within OHPLBJKB_02515 at 2628.833 kb on + strand at 2628.854 kb on + strand at 2628.878 kb on + strand at 2629.058 kb on + strand, within OHPLBJKB_02516 at 2629.064 kb on + strand, within OHPLBJKB_02516 at 2629.064 kb on + strand, within OHPLBJKB_02516 at 2629.253 kb on + strand, within OHPLBJKB_02516 at 2629.380 kb on + strand, within OHPLBJKB_02516 at 2629.862 kb on + strand, within OHPLBJKB_02517 at 2629.914 kb on + strand at 2629.938 kb on - strand at 2629.954 kb on + strand at 2629.954 kb on + strand at 2629.954 kb on + strand at 2630.021 kb on + strand at 2630.034 kb on + strand at 2630.034 kb on + strand at 2630.035 kb on - strand at 2630.035 kb on - strand at 2630.053 kb on - strand at 2630.059 kb on + strand at 2630.091 kb on + strand at 2630.092 kb on - strand at 2630.179 kb on + strand at 2630.200 kb on - strand at 2630.345 kb on - strand at 2630.350 kb on + strand at 2630.398 kb on + strand at 2630.399 kb on - strand at 2630.402 kb on - strand at 2630.402 kb on - strand at 2630.402 kb on - strand at 2630.402 kb on - strand at 2630.412 kb on + strand at 2630.412 kb on + strand at 2630.412 kb on + strand at 2630.413 kb on - strand at 2630.414 kb on + strand at 2630.459 kb on - strand at 2630.552 kb on + strand at 2630.579 kb on + strand at 2630.579 kb on + strand at 2630.579 kb on + strand at 2630.579 kb on + strand at 2630.579 kb on + strand at 2630.579 kb on + strand at 2630.580 kb on - strand at 2630.581 kb on + strand at 2630.581 kb on + strand at 2630.581 kb on + strand at 2630.581 kb on + strand at 2630.581 kb on + strand at 2630.581 kb on + strand at 2630.581 kb on + strand at 2630.581 kb on + strand at 2630.581 kb on + strand at 2630.582 kb on - strand at 2630.582 kb on - strand at 2630.582 kb on - strand at 2630.582 kb on - strand at 2630.582 kb on - strand at 2630.582 kb on - strand at 2630.582 kb on - strand at 2630.583 kb on + strand at 2630.583 kb on + strand at 2630.583 kb on + strand at 2630.583 kb on + strand at 2630.583 kb on + strand at 2630.583 kb on + strand at 2630.583 kb on + strand at 2630.584 kb on - strand at 2630.584 kb on - strand at 2630.584 kb on - strand at 2630.584 kb on - strand at 2630.584 kb on - strand at 2630.584 kb on - strand at 2630.584 kb on - strand at 2630.584 kb on - strand at 2630.623 kb on + strand at 2630.623 kb on + strand at 2630.624 kb on - strand at 2630.631 kb on - strand at 2630.631 kb on - strand at 2630.634 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 MOI10 remove 2,627,850 - -0.9 2,627,904 - -0.2 2,627,960 + -1.4 2,627,978 - +0.2 2,628,029 + +0.0 2,628,031 + -0.1 2,628,041 + +0.5 2,628,043 + +0.2 2,628,056 - -0.1 2,628,090 + +0.1 2,628,090 + +0.5 2,628,093 + +0.4 2,628,093 + -0.0 2,628,097 + -0.5 2,628,158 + -2.0 2,628,189 + OHPLBJKB_02515 0.11 -0.7 2,628,260 + OHPLBJKB_02515 0.21 -0.0 2,628,290 + OHPLBJKB_02515 0.25 +0.1 2,628,347 + OHPLBJKB_02515 0.33 -1.1 2,628,468 + OHPLBJKB_02515 0.51 +0.9 2,628,497 + OHPLBJKB_02515 0.55 +0.0 2,628,497 + OHPLBJKB_02515 0.55 +2.3 2,628,833 + -0.6 2,628,854 + +1.0 2,628,878 + +1.0 2,629,058 + OHPLBJKB_02516 0.28 -2.6 2,629,064 + OHPLBJKB_02516 0.28 +0.2 2,629,064 + OHPLBJKB_02516 0.28 -0.5 2,629,253 + OHPLBJKB_02516 0.52 -0.3 2,629,380 + OHPLBJKB_02516 0.67 +0.2 2,629,862 + OHPLBJKB_02517 0.79 +0.6 2,629,914 + -0.2 2,629,938 - -0.6 2,629,954 + +0.0 2,629,954 + +0.7 2,629,954 + -1.2 2,630,021 + +1.1 2,630,034 + +0.2 2,630,034 + -1.2 2,630,035 - -0.5 2,630,035 - +0.8 2,630,053 - +1.2 2,630,059 + -0.2 2,630,091 + -2.6 2,630,092 - +0.2 2,630,179 + -3.0 2,630,200 - +0.4 2,630,345 - -0.7 2,630,350 + +0.4 2,630,398 + -0.7 2,630,399 - -0.7 2,630,402 - +0.8 2,630,402 - -0.6 2,630,402 - +0.3 2,630,402 - +0.0 2,630,412 + -0.6 2,630,412 + -1.0 2,630,412 + -0.1 2,630,413 - -0.1 2,630,414 + +0.0 2,630,459 - +0.5 2,630,552 + +0.4 2,630,579 + -0.4 2,630,579 + -0.9 2,630,579 + +1.4 2,630,579 + -0.5 2,630,579 + +0.4 2,630,579 + +0.3 2,630,580 - -0.4 2,630,581 + -0.6 2,630,581 + -0.8 2,630,581 + +0.6 2,630,581 + +0.3 2,630,581 + -0.9 2,630,581 + -0.3 2,630,581 + +0.6 2,630,581 + -0.4 2,630,581 + -0.3 2,630,582 - +0.3 2,630,582 - +1.0 2,630,582 - -0.3 2,630,582 - +0.1 2,630,582 - -0.9 2,630,582 - +1.3 2,630,582 - +0.4 2,630,583 + +1.8 2,630,583 + -0.6 2,630,583 + -0.2 2,630,583 + -1.1 2,630,583 + +1.0 2,630,583 + +1.2 2,630,583 + +0.4 2,630,584 - -0.2 2,630,584 - -0.2 2,630,584 - -0.1 2,630,584 - -0.7 2,630,584 - -0.4 2,630,584 - -1.2 2,630,584 - +0.1 2,630,584 - -0.5 2,630,623 + +0.3 2,630,623 + +0.0 2,630,624 - +0.1 2,630,631 - +0.7 2,630,631 - -0.0 2,630,634 - -0.1
Or see this region's nucleotide sequence