Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01358

Experiment: N4 MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N4 MOI10
1,401,654	+				+1.0
1,401,729	-		OHPLBJKB_01357	0.15	+0.5
1,401,739	-		OHPLBJKB_01357	0.16	-0.7
1,401,804	-		OHPLBJKB_01357	0.23	+0.5
1,401,804	-		OHPLBJKB_01357	0.23	-0.8
1,401,826	+		OHPLBJKB_01357	0.25	+0.5
1,401,905	+		OHPLBJKB_01357	0.33	+0.3
1,401,906	-		OHPLBJKB_01357	0.34	+0.3
1,401,928	-		OHPLBJKB_01357	0.36	-0.5
1,401,956	+		OHPLBJKB_01357	0.39	+1.4
1,401,966	+		OHPLBJKB_01357	0.40	+0.3
1,401,984	+		OHPLBJKB_01357	0.42	+0.8
1,401,985	-		OHPLBJKB_01357	0.42	+0.5
1,402,054	+		OHPLBJKB_01357	0.49	+0.2
1,402,054	+		OHPLBJKB_01357	0.49	+0.6
1,402,055	-		OHPLBJKB_01357	0.49	+0.4
1,402,055	-		OHPLBJKB_01357	0.49	-0.3
1,402,122	-		OHPLBJKB_01357	0.57	+0.1
1,402,122	-		OHPLBJKB_01357	0.57	-0.5
1,402,122	-		OHPLBJKB_01357	0.57	-0.1
1,402,126	-		OHPLBJKB_01357	0.57	-2.5
1,402,126	-		OHPLBJKB_01357	0.57	-0.1
1,402,135	+		OHPLBJKB_01357	0.58	-0.6
1,402,166	+		OHPLBJKB_01357	0.61	+0.2
1,402,185	+		OHPLBJKB_01357	0.63	-1.0
1,402,186	-		OHPLBJKB_01357	0.63	-0.6
1,402,186	-		OHPLBJKB_01357	0.63	-0.1
1,402,243	-		OHPLBJKB_01357	0.70	-0.2
1,402,243	-		OHPLBJKB_01357	0.70	+0.2
1,402,243	-		OHPLBJKB_01357	0.70	-0.0
1,402,266	+		OHPLBJKB_01357	0.72	+0.2
1,402,318	-		OHPLBJKB_01357	0.78	+0.1
1,402,439	-				-0.5
1,402,441	+				+0.3
1,402,441	+				+0.9
1,402,441	+				+0.2
1,402,442	-				-0.4
1,402,442	-				-1.1
1,402,442	-				+0.2
1,402,442	-				-0.8
1,402,442	-				-0.0
1,402,442	-				-0.6
1,402,491	+				-1.1
1,402,525	+				-1.1
1,402,526	-				-0.3
1,402,532	+				-0.7
1,402,533	-				-0.8
1,402,570	+				-0.3
1,402,571	-				+0.2
1,402,571	-				+0.5
1,402,595	+				-0.2
1,402,596	-				-0.0
1,402,605	+				+0.5
1,402,676	-		OHPLBJKB_01358	0.71	+0.1
1,402,676	-		OHPLBJKB_01358	0.71	-1.2
1,402,685	+		OHPLBJKB_01358	0.83	-0.4
1,402,685	+		OHPLBJKB_01358	0.83	-0.9
1,402,689	+		OHPLBJKB_01358	0.88	-1.6
1,402,690	-				-0.4
1,402,711	+				-0.1
1,402,714	-				-0.5
1,402,740	-				+0.5
1,402,740	-				-0.5
1,402,740	-				+0.3
1,402,774	+				-1.2
1,402,848	-				-1.3
1,402,863	-				+0.8
1,402,896	-		OHPLBJKB_01359	0.13	+0.3
1,402,928	+		OHPLBJKB_01359	0.17	+0.4
1,402,928	+		OHPLBJKB_01359	0.17	+0.1
1,402,928	+		OHPLBJKB_01359	0.17	-1.5
1,402,929	-		OHPLBJKB_01359	0.17	-0.4
1,402,929	-		OHPLBJKB_01359	0.17	+0.2
1,403,055	+		OHPLBJKB_01359	0.30	-0.6
1,403,056	-		OHPLBJKB_01359	0.30	-1.7
1,403,056	-		OHPLBJKB_01359	0.30	-0.9
1,403,057	+		OHPLBJKB_01359	0.30	-0.1
1,403,057	+		OHPLBJKB_01359	0.30	+0.9
1,403,057	+		OHPLBJKB_01359	0.30	+0.0
1,403,057	+		OHPLBJKB_01359	0.30	-0.5
1,403,057	+		OHPLBJKB_01359	0.30	-1.0
1,403,058	-		OHPLBJKB_01359	0.31	-0.6
1,403,106	-		OHPLBJKB_01359	0.36	-0.2
1,403,220	-		OHPLBJKB_01359	0.48	-0.6
1,403,220	-		OHPLBJKB_01359	0.48	+0.4
1,403,225	+		OHPLBJKB_01359	0.48	-0.3
1,403,225	+		OHPLBJKB_01359	0.48	-0.7
1,403,225	+		OHPLBJKB_01359	0.48	-0.5
1,403,225	+		OHPLBJKB_01359	0.48	+0.2
1,403,225	+		OHPLBJKB_01359	0.48	-0.6
1,403,225	+		OHPLBJKB_01359	0.48	+1.0
1,403,225	+		OHPLBJKB_01359	0.48	+1.1
1,403,226	-		OHPLBJKB_01359	0.49	+0.2
1,403,226	-		OHPLBJKB_01359	0.49	-0.7
1,403,226	-		OHPLBJKB_01359	0.49	-0.3
1,403,226	-		OHPLBJKB_01359	0.49	-0.1
1,403,226	-		OHPLBJKB_01359	0.49	+0.0
1,403,226	-		OHPLBJKB_01359	0.49	-0.2
1,403,226	-		OHPLBJKB_01359	0.49	-0.6
1,403,226	-		OHPLBJKB_01359	0.49	+0.4
1,403,227	+		OHPLBJKB_01359	0.49	+0.3
1,403,227	+		OHPLBJKB_01359	0.49	+0.0
1,403,227	+		OHPLBJKB_01359	0.49	-0.0
1,403,228	-		OHPLBJKB_01359	0.49	-0.4
1,403,228	-		OHPLBJKB_01359	0.49	+0.1
1,403,228	-		OHPLBJKB_01359	0.49	-0.5
1,403,228	-		OHPLBJKB_01359	0.49	-0.0
1,403,228	-		OHPLBJKB_01359	0.49	+1.5
1,403,228	-		OHPLBJKB_01359	0.49	+0.4
1,403,249	+		OHPLBJKB_01359	0.51	+0.8
1,403,249	+		OHPLBJKB_01359	0.51	-0.1
1,403,264	+		OHPLBJKB_01359	0.53	-0.3
1,403,264	+		OHPLBJKB_01359	0.53	-0.9
1,403,295	+		OHPLBJKB_01359	0.56	-0.2
1,403,295	+		OHPLBJKB_01359	0.56	+0.8
1,403,296	-		OHPLBJKB_01359	0.56	-0.5
1,403,296	-		OHPLBJKB_01359	0.56	-1.1
1,403,296	-		OHPLBJKB_01359	0.56	+0.3
1,403,296	-		OHPLBJKB_01359	0.56	+0.6
1,403,296	-		OHPLBJKB_01359	0.56	+0.3
1,403,297	+		OHPLBJKB_01359	0.56	+0.9
1,403,297	+		OHPLBJKB_01359	0.56	+0.2
1,403,297	+		OHPLBJKB_01359	0.56	-0.1
1,403,297	+		OHPLBJKB_01359	0.56	+0.9
1,403,298	-		OHPLBJKB_01359	0.56	+0.3
1,403,298	-		OHPLBJKB_01359	0.56	-0.1
1,403,298	-		OHPLBJKB_01359	0.56	+0.6
1,403,301	+		OHPLBJKB_01359	0.57	+0.6
1,403,301	+		OHPLBJKB_01359	0.57	+0.1
1,403,301	+		OHPLBJKB_01359	0.57	-0.1
1,403,301	+		OHPLBJKB_01359	0.57	-0.4
1,403,370	+		OHPLBJKB_01359	0.64	+0.1
1,403,399	+		OHPLBJKB_01359	0.67	+0.3
1,403,399	+		OHPLBJKB_01359	0.67	-0.0
1,403,400	-		OHPLBJKB_01359	0.67	+0.4
1,403,411	+		OHPLBJKB_01359	0.68	-0.7
1,403,411	+		OHPLBJKB_01359	0.68	-0.3
1,403,411	+		OHPLBJKB_01359	0.68	-1.7
1,403,411	+		OHPLBJKB_01359	0.68	-0.7
1,403,412	-		OHPLBJKB_01359	0.68	-2.2
1,403,412	-		OHPLBJKB_01359	0.68	-0.2
1,403,412	-		OHPLBJKB_01359	0.68	+0.8
1,403,622	+				+0.6
1,403,622	+				-0.6
1,403,622	+				-1.3
1,403,623	-				+0.4
1,403,623	-				+0.1
1,403,623	-				+0.6