Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02974

Experiment: Galactan from Potato 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02972 and BACOVA_02973 are separated by 205 nucleotidesBACOVA_02973 and BACOVA_02974 are separated by 73 nucleotidesBACOVA_02974 and BACOVA_02975 are separated by 12 nucleotides BACOVA_02972: BACOVA_02972 - hypothetical protein, at 50,140 to 50,598 _02972 BACOVA_02973: BACOVA_02973 - 5S ribosomal RNA, at 50,804 to 50,914 _02973 BACOVA_02974: BACOVA_02974 - glycosyl hydrolase, family 15, at 50,988 to 52,778 _02974 BACOVA_02975: BACOVA_02975 - trehalose-phosphatase, at 52,791 to 55,064 _02975 Position (kb) 50 51 52 53Strain fitness (log2 ratio) -2 -1 0 1 2at 50.963 kb on + strandat 51.036 kb on - strandat 51.041 kb on + strandat 51.064 kb on + strandat 51.064 kb on + strandat 51.064 kb on + strandat 51.065 kb on - strandat 51.111 kb on - strandat 51.119 kb on + strandat 51.207 kb on + strand, within BACOVA_02974at 51.221 kb on + strand, within BACOVA_02974at 51.242 kb on + strand, within BACOVA_02974at 51.271 kb on + strand, within BACOVA_02974at 51.272 kb on - strand, within BACOVA_02974at 51.277 kb on + strand, within BACOVA_02974at 51.281 kb on + strand, within BACOVA_02974at 51.281 kb on + strand, within BACOVA_02974at 51.281 kb on + strand, within BACOVA_02974at 51.281 kb on + strand, within BACOVA_02974at 51.281 kb on + strand, within BACOVA_02974at 51.282 kb on - strand, within BACOVA_02974at 51.336 kb on + strand, within BACOVA_02974at 51.336 kb on + strand, within BACOVA_02974at 51.336 kb on + strand, within BACOVA_02974at 51.337 kb on - strand, within BACOVA_02974at 51.337 kb on - strand, within BACOVA_02974at 51.337 kb on - strand, within BACOVA_02974at 51.337 kb on - strand, within BACOVA_02974at 51.339 kb on - strand, within BACOVA_02974at 51.351 kb on + strand, within BACOVA_02974at 51.353 kb on + strand, within BACOVA_02974at 51.379 kb on - strand, within BACOVA_02974at 51.404 kb on + strand, within BACOVA_02974at 51.404 kb on + strand, within BACOVA_02974at 51.404 kb on + strand, within BACOVA_02974at 51.405 kb on - strand, within BACOVA_02974at 51.407 kb on - strand, within BACOVA_02974at 51.434 kb on + strand, within BACOVA_02974at 51.498 kb on - strand, within BACOVA_02974at 51.500 kb on - strand, within BACOVA_02974at 51.505 kb on + strand, within BACOVA_02974at 51.505 kb on + strand, within BACOVA_02974at 51.530 kb on + strand, within BACOVA_02974at 51.543 kb on + strand, within BACOVA_02974at 51.543 kb on + strand, within BACOVA_02974at 51.544 kb on - strand, within BACOVA_02974at 51.549 kb on + strand, within BACOVA_02974at 51.640 kb on - strand, within BACOVA_02974at 51.661 kb on - strand, within BACOVA_02974at 51.715 kb on + strand, within BACOVA_02974at 51.715 kb on + strand, within BACOVA_02974at 51.716 kb on - strand, within BACOVA_02974at 51.716 kb on - strand, within BACOVA_02974at 51.722 kb on - strand, within BACOVA_02974at 51.722 kb on - strand, within BACOVA_02974at 51.769 kb on + strand, within BACOVA_02974at 51.789 kb on + strand, within BACOVA_02974at 51.807 kb on - strand, within BACOVA_02974at 51.807 kb on - strand, within BACOVA_02974at 51.866 kb on - strand, within BACOVA_02974at 51.866 kb on - strand, within BACOVA_02974at 51.866 kb on - strand, within BACOVA_02974at 51.866 kb on - strand, within BACOVA_02974at 51.866 kb on - strand, within BACOVA_02974at 51.869 kb on + strand, within BACOVA_02974at 51.870 kb on - strand, within BACOVA_02974at 51.939 kb on - strand, within BACOVA_02974at 51.939 kb on - strand, within BACOVA_02974at 52.083 kb on + strand, within BACOVA_02974at 52.114 kb on - strand, within BACOVA_02974at 52.121 kb on + strand, within BACOVA_02974at 52.121 kb on + strand, within BACOVA_02974at 52.122 kb on - strand, within BACOVA_02974at 52.122 kb on - strand, within BACOVA_02974at 52.122 kb on - strand, within BACOVA_02974at 52.132 kb on + strand, within BACOVA_02974at 52.133 kb on - strand, within BACOVA_02974at 52.166 kb on - strand, within BACOVA_02974at 52.167 kb on + strand, within BACOVA_02974at 52.167 kb on + strand, within BACOVA_02974at 52.168 kb on + strand, within BACOVA_02974at 52.168 kb on - strand, within BACOVA_02974at 52.189 kb on - strand, within BACOVA_02974at 52.311 kb on + strand, within BACOVA_02974at 52.311 kb on + strand, within BACOVA_02974at 52.312 kb on - strand, within BACOVA_02974at 52.312 kb on - strand, within BACOVA_02974at 52.312 kb on - strand, within BACOVA_02974at 52.346 kb on - strand, within BACOVA_02974at 52.355 kb on + strand, within BACOVA_02974at 52.357 kb on + strand, within BACOVA_02974at 52.357 kb on + strand, within BACOVA_02974at 52.357 kb on + strand, within BACOVA_02974at 52.357 kb on + strand, within BACOVA_02974at 52.358 kb on - strand, within BACOVA_02974at 52.358 kb on - strand, within BACOVA_02974at 52.396 kb on + strand, within BACOVA_02974at 52.396 kb on + strand, within BACOVA_02974at 52.414 kb on + strand, within BACOVA_02974at 52.452 kb on + strand, within BACOVA_02974at 52.453 kb on - strand, within BACOVA_02974at 52.453 kb on - strand, within BACOVA_02974at 52.457 kb on - strand, within BACOVA_02974at 52.457 kb on - strand, within BACOVA_02974at 52.457 kb on - strand, within BACOVA_02974at 52.476 kb on + strand, within BACOVA_02974at 52.481 kb on - strand, within BACOVA_02974at 52.508 kb on - strand, within BACOVA_02974at 52.517 kb on + strand, within BACOVA_02974at 52.517 kb on + strand, within BACOVA_02974at 52.517 kb on + strand, within BACOVA_02974at 52.520 kb on - strand, within BACOVA_02974at 52.520 kb on - strand, within BACOVA_02974at 52.520 kb on - strand, within BACOVA_02974at 52.571 kb on + strand, within BACOVA_02974at 52.572 kb on - strand, within BACOVA_02974at 52.753 kb on - strandat 52.793 kb on - strandat 52.851 kb on - strandat 52.896 kb on + strandat 52.897 kb on - strandat 52.908 kb on + strandat 52.908 kb on + strandat 52.955 kb on + strandat 52.959 kb on + strandat 53.085 kb on - strand, within BACOVA_02975at 53.190 kb on + strand, within BACOVA_02975at 53.191 kb on - strand, within BACOVA_02975at 53.303 kb on + strand, within BACOVA_02975at 53.304 kb on - strand, within BACOVA_02975at 53.328 kb on + strand, within BACOVA_02975at 53.360 kb on - strand, within BACOVA_02975at 53.385 kb on - strand, within BACOVA_02975at 53.385 kb on - strand, within BACOVA_02975at 53.420 kb on + strand, within BACOVA_02975at 53.420 kb on + strand, within BACOVA_02975at 53.420 kb on + strand, within BACOVA_02975at 53.451 kb on - strand, within BACOVA_02975at 53.451 kb on - strand, within BACOVA_02975at 53.451 kb on - strand, within BACOVA_02975at 53.481 kb on + strand, within BACOVA_02975at 53.482 kb on - strand, within BACOVA_02975at 53.486 kb on + strand, within BACOVA_02975at 53.505 kb on - strand, within BACOVA_02975at 53.547 kb on - strand, within BACOVA_02975at 53.547 kb on - strand, within BACOVA_02975at 53.547 kb on - strand, within BACOVA_02975at 53.554 kb on + strand, within BACOVA_02975at 53.555 kb on - strand, within BACOVA_02975at 53.590 kb on + strand, within BACOVA_02975at 53.590 kb on + strand, within BACOVA_02975at 53.591 kb on - strand, within BACOVA_02975at 53.641 kb on - strand, within BACOVA_02975at 53.645 kb on + strand, within BACOVA_02975at 53.646 kb on - strand, within BACOVA_02975at 53.657 kb on + strand, within BACOVA_02975at 53.732 kb on + strand, within BACOVA_02975

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Per-strain Table

Position Strand Gene LocusTag Fraction Galactan from Potato 2.5 mg/mL (C)
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50,963 + -1.5
51,036 - +0.7
51,041 + +0.3
51,064 + -1.0
51,064 + +0.1
51,064 + -0.7
51,065 - +0.5
51,111 - -0.0
51,119 + +0.2
51,207 + BACOVA_02974 0.12 -0.7
51,221 + BACOVA_02974 0.13 +0.1
51,242 + BACOVA_02974 0.14 -0.6
51,271 + BACOVA_02974 0.16 +0.5
51,272 - BACOVA_02974 0.16 -0.0
51,277 + BACOVA_02974 0.16 +0.3
51,281 + BACOVA_02974 0.16 -0.8
51,281 + BACOVA_02974 0.16 +0.7
51,281 + BACOVA_02974 0.16 +0.1
51,281 + BACOVA_02974 0.16 +0.1
51,281 + BACOVA_02974 0.16 +0.1
51,282 - BACOVA_02974 0.16 -0.5
51,336 + BACOVA_02974 0.19 -0.5
51,336 + BACOVA_02974 0.19 -0.4
51,336 + BACOVA_02974 0.19 +0.3
51,337 - BACOVA_02974 0.19 -0.0
51,337 - BACOVA_02974 0.19 +1.0
51,337 - BACOVA_02974 0.19 -0.7
51,337 - BACOVA_02974 0.19 +0.6
51,339 - BACOVA_02974 0.20 -1.6
51,351 + BACOVA_02974 0.20 +0.4
51,353 + BACOVA_02974 0.20 -0.5
51,379 - BACOVA_02974 0.22 -0.8
51,404 + BACOVA_02974 0.23 -0.7
51,404 + BACOVA_02974 0.23 -1.0
51,404 + BACOVA_02974 0.23 +0.3
51,405 - BACOVA_02974 0.23 +0.8
51,407 - BACOVA_02974 0.23 +0.4
51,434 + BACOVA_02974 0.25 -0.3
51,498 - BACOVA_02974 0.28 +1.0
51,500 - BACOVA_02974 0.29 -0.0
51,505 + BACOVA_02974 0.29 -0.4
51,505 + BACOVA_02974 0.29 -0.3
51,530 + BACOVA_02974 0.30 +0.1
51,543 + BACOVA_02974 0.31 -0.3
51,543 + BACOVA_02974 0.31 -0.4
51,544 - BACOVA_02974 0.31 +0.0
51,549 + BACOVA_02974 0.31 -0.0
51,640 - BACOVA_02974 0.36 -0.3
51,661 - BACOVA_02974 0.38 -0.2
51,715 + BACOVA_02974 0.41 +0.7
51,715 + BACOVA_02974 0.41 +0.5
51,716 - BACOVA_02974 0.41 -1.0
51,716 - BACOVA_02974 0.41 +1.1
51,722 - BACOVA_02974 0.41 +0.6
51,722 - BACOVA_02974 0.41 +1.0
51,769 + BACOVA_02974 0.44 -1.2
51,789 + BACOVA_02974 0.45 +0.6
51,807 - BACOVA_02974 0.46 +0.2
51,807 - BACOVA_02974 0.46 -1.3
51,866 - BACOVA_02974 0.49 +0.1
51,866 - BACOVA_02974 0.49 +0.5
51,866 - BACOVA_02974 0.49 +0.4
51,866 - BACOVA_02974 0.49 -0.3
51,866 - BACOVA_02974 0.49 +1.2
51,869 + BACOVA_02974 0.49 +0.2
51,870 - BACOVA_02974 0.49 +0.7
51,939 - BACOVA_02974 0.53 -0.1
51,939 - BACOVA_02974 0.53 +1.6
52,083 + BACOVA_02974 0.61 -0.1
52,114 - BACOVA_02974 0.63 -0.3
52,121 + BACOVA_02974 0.63 -0.2
52,121 + BACOVA_02974 0.63 -0.0
52,122 - BACOVA_02974 0.63 -0.0
52,122 - BACOVA_02974 0.63 +1.6
52,122 - BACOVA_02974 0.63 +1.3
52,132 + BACOVA_02974 0.64 +0.6
52,133 - BACOVA_02974 0.64 +0.5
52,166 - BACOVA_02974 0.66 +0.1
52,167 + BACOVA_02974 0.66 +0.0
52,167 + BACOVA_02974 0.66 +0.3
52,168 + BACOVA_02974 0.66 -0.6
52,168 - BACOVA_02974 0.66 -0.2
52,189 - BACOVA_02974 0.67 +0.7
52,311 + BACOVA_02974 0.74 -0.5
52,311 + BACOVA_02974 0.74 -0.6
52,312 - BACOVA_02974 0.74 -0.6
52,312 - BACOVA_02974 0.74 -0.9
52,312 - BACOVA_02974 0.74 -0.4
52,346 - BACOVA_02974 0.76 -0.2
52,355 + BACOVA_02974 0.76 -0.8
52,357 + BACOVA_02974 0.76 +0.5
52,357 + BACOVA_02974 0.76 -0.2
52,357 + BACOVA_02974 0.76 +2.0
52,357 + BACOVA_02974 0.76 +1.0
52,358 - BACOVA_02974 0.76 -1.0
52,358 - BACOVA_02974 0.76 -0.0
52,396 + BACOVA_02974 0.79 -0.6
52,396 + BACOVA_02974 0.79 +0.4
52,414 + BACOVA_02974 0.80 -1.1
52,452 + BACOVA_02974 0.82 -1.5
52,453 - BACOVA_02974 0.82 +0.4
52,453 - BACOVA_02974 0.82 -0.4
52,457 - BACOVA_02974 0.82 +1.2
52,457 - BACOVA_02974 0.82 -1.0
52,457 - BACOVA_02974 0.82 -1.0
52,476 + BACOVA_02974 0.83 -1.6
52,481 - BACOVA_02974 0.83 -0.9
52,508 - BACOVA_02974 0.85 -0.7
52,517 + BACOVA_02974 0.85 +1.2
52,517 + BACOVA_02974 0.85 -0.0
52,517 + BACOVA_02974 0.85 +1.0
52,520 - BACOVA_02974 0.86 -0.7
52,520 - BACOVA_02974 0.86 +0.2
52,520 - BACOVA_02974 0.86 -0.5
52,571 + BACOVA_02974 0.88 +0.2
52,572 - BACOVA_02974 0.88 +0.7
52,753 - +1.2
52,793 - +1.2
52,851 - +0.5
52,896 + +1.1
52,897 - -0.3
52,908 + -2.3
52,908 + -1.3
52,955 + +0.2
52,959 + -0.2
53,085 - BACOVA_02975 0.13 +0.4
53,190 + BACOVA_02975 0.18 -0.3
53,191 - BACOVA_02975 0.18 -1.6
53,303 + BACOVA_02975 0.23 +0.2
53,304 - BACOVA_02975 0.23 +1.2
53,328 + BACOVA_02975 0.24 -0.4
53,360 - BACOVA_02975 0.25 -2.0
53,385 - BACOVA_02975 0.26 +0.4
53,385 - BACOVA_02975 0.26 +0.7
53,420 + BACOVA_02975 0.28 +0.4
53,420 + BACOVA_02975 0.28 +0.2
53,420 + BACOVA_02975 0.28 -0.8
53,451 - BACOVA_02975 0.29 -1.7
53,451 - BACOVA_02975 0.29 +1.7
53,451 - BACOVA_02975 0.29 -1.3
53,481 + BACOVA_02975 0.30 +0.8
53,482 - BACOVA_02975 0.30 +0.2
53,486 + BACOVA_02975 0.31 +2.0
53,505 - BACOVA_02975 0.31 +1.0
53,547 - BACOVA_02975 0.33 +0.4
53,547 - BACOVA_02975 0.33 +0.0
53,547 - BACOVA_02975 0.33 -0.4
53,554 + BACOVA_02975 0.34 +0.8
53,555 - BACOVA_02975 0.34 -0.5
53,590 + BACOVA_02975 0.35 -1.4
53,590 + BACOVA_02975 0.35 +0.2
53,591 - BACOVA_02975 0.35 +0.0
53,641 - BACOVA_02975 0.37 -1.4
53,645 + BACOVA_02975 0.38 +0.8
53,646 - BACOVA_02975 0.38 -0.0
53,657 + BACOVA_02975 0.38 +0.3
53,732 + BACOVA_02975 0.41 +0.5

Or see this region's nucleotide sequence