Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03027

Experiment: T4 MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	T4 MOI10
3,156,352	+				-0.6
3,156,352	+				+0.7
3,156,352	+				+0.7
3,156,385	+				+0.3
3,156,386	-				+0.0
3,156,489	+		OHPLBJKB_03026	0.26	-0.7
3,156,489	+		OHPLBJKB_03026	0.26	+1.2
3,156,489	+		OHPLBJKB_03026	0.26	+0.8
3,156,489	+		OHPLBJKB_03026	0.26	+0.4
3,156,489	+		OHPLBJKB_03026	0.26	-0.5
3,156,489	+		OHPLBJKB_03026	0.26	-0.6
3,156,490	-		OHPLBJKB_03026	0.26	+1.1
3,156,490	-		OHPLBJKB_03026	0.26	-0.6
3,156,490	-		OHPLBJKB_03026	0.26	+0.8
3,156,490	-		OHPLBJKB_03026	0.26	-0.3
3,156,555	+		OHPLBJKB_03026	0.39	-0.6
3,156,555	+		OHPLBJKB_03026	0.39	+0.9
3,156,555	+		OHPLBJKB_03026	0.39	-0.3
3,156,576	-		OHPLBJKB_03026	0.43	-0.2
3,156,601	+		OHPLBJKB_03026	0.47	-0.0
3,156,601	+		OHPLBJKB_03026	0.47	-0.3
3,156,602	-		OHPLBJKB_03026	0.48	+0.3
3,156,602	-		OHPLBJKB_03026	0.48	-0.3
3,156,602	-		OHPLBJKB_03026	0.48	-0.5
3,156,602	-		OHPLBJKB_03026	0.48	+0.4
3,156,602	-		OHPLBJKB_03026	0.48	-0.3
3,156,602	-		OHPLBJKB_03026	0.48	+1.4
3,156,602	-		OHPLBJKB_03026	0.48	-0.4
3,156,604	+		OHPLBJKB_03026	0.48	+0.7
3,156,604	+		OHPLBJKB_03026	0.48	-0.2
3,156,605	-		OHPLBJKB_03026	0.48	-0.0
3,156,613	-		OHPLBJKB_03026	0.50	-0.0
3,156,613	-		OHPLBJKB_03026	0.50	+0.2
3,156,613	-		OHPLBJKB_03026	0.50	+0.0
3,156,616	+		OHPLBJKB_03026	0.50	+0.4
3,156,616	+		OHPLBJKB_03026	0.50	-0.3
3,156,616	+		OHPLBJKB_03026	0.50	-1.4
3,156,617	-		OHPLBJKB_03026	0.51	+0.1
3,156,617	-		OHPLBJKB_03026	0.51	+0.0
3,156,617	-		OHPLBJKB_03026	0.51	-0.9
3,156,668	+		OHPLBJKB_03026	0.60	+0.1
3,156,668	+		OHPLBJKB_03026	0.60	-0.8
3,156,668	+		OHPLBJKB_03026	0.60	-1.6
3,156,668	+		OHPLBJKB_03026	0.60	-0.5
3,156,668	+		OHPLBJKB_03026	0.60	+0.7
3,156,669	-		OHPLBJKB_03026	0.61	-0.4
3,156,669	-		OHPLBJKB_03026	0.61	+0.4
3,156,673	+		OHPLBJKB_03026	0.61	-0.9
3,156,695	-		OHPLBJKB_03026	0.66	-0.6
3,156,712	+		OHPLBJKB_03026	0.69	-0.0
3,156,712	+		OHPLBJKB_03026	0.69	-0.3
3,156,713	-		OHPLBJKB_03026	0.69	+0.6
3,156,748	+		OHPLBJKB_03026	0.76	-0.6
3,156,755	-		OHPLBJKB_03026	0.77	+0.1
3,156,780	-		OHPLBJKB_03026	0.82	+0.9
3,156,818	+		OHPLBJKB_03026	0.90	+0.1
3,156,818	+		OHPLBJKB_03026	0.90	+0.0
3,156,818	+		OHPLBJKB_03026	0.90	+0.1
3,156,818	+		OHPLBJKB_03026	0.90	-0.2
3,156,818	+		OHPLBJKB_03026	0.90	-0.5
3,156,833	+				-0.2
3,156,833	+				-0.6
3,156,833	+				+0.6
3,156,833	+				+0.1
3,156,842	+				-2.3
3,156,842	+				+0.7
3,156,843	-				-0.7
3,156,843	-				-0.3
3,156,843	-				-0.6
3,156,888	+				+0.1
3,156,888	+				+0.6
3,156,889	-				-0.1
3,156,977	-				-0.6
3,157,036	+				+0.5
3,157,036	+				+0.3
3,157,037	-				+0.4
3,157,040	+				+0.1
3,157,074	+				-1.1
3,157,075	-				-0.5
3,157,078	+				-2.0
3,157,078	+				+0.9
3,157,078	+				+0.6
3,157,079	-				-0.3
3,157,079	-				+0.3
3,157,087	+				+0.6
3,157,181	+				-1.2
3,157,181	+				-1.3
3,157,181	+				-3.3
3,157,181	+				-1.7
3,157,182	-				-0.9
3,157,182	-				-2.1
3,157,182	-				-2.1
3,157,182	-				-1.8
3,157,182	-				-1.6
3,157,182	-				-3.7
3,157,182	-				-2.7
3,157,182	-				-2.1
3,157,182	-				-1.7
3,157,184	-				-2.4
3,157,184	-				-1.6
3,157,344	-		OHPLBJKB_03027	0.16	-0.9
3,157,393	+		OHPLBJKB_03027	0.19	-2.1
3,157,394	-		OHPLBJKB_03027	0.19	-3.6
3,157,429	+		OHPLBJKB_03027	0.21	-0.1
3,157,430	-		OHPLBJKB_03027	0.21	-2.2
3,157,626	+		OHPLBJKB_03027	0.33	-2.3
3,157,626	+		OHPLBJKB_03027	0.33	-0.6
3,157,627	-		OHPLBJKB_03027	0.33	-0.7
3,157,735	+		OHPLBJKB_03027	0.40	-0.6
3,157,736	-		OHPLBJKB_03027	0.40	-1.7
3,157,756	+		OHPLBJKB_03027	0.41	-1.1
3,157,808	-		OHPLBJKB_03027	0.44	+0.6
3,157,841	+		OHPLBJKB_03027	0.46	+1.1
3,157,923	-		OHPLBJKB_03027	0.51	-2.0
3,157,958	+		OHPLBJKB_03027	0.53	-0.1
3,157,975	+		OHPLBJKB_03027	0.54	-0.9
3,157,975	+		OHPLBJKB_03027	0.54	-0.1
3,157,975	+		OHPLBJKB_03027	0.54	-0.9
3,157,975	+		OHPLBJKB_03027	0.54	-3.4
3,157,976	-		OHPLBJKB_03027	0.54	-0.6
3,157,976	-		OHPLBJKB_03027	0.54	-3.2
3,157,976	-		OHPLBJKB_03027	0.54	-1.1
3,157,976	-		OHPLBJKB_03027	0.54	-2.1
3,157,976	-		OHPLBJKB_03027	0.54	-1.0
3,157,988	+		OHPLBJKB_03027	0.55	-1.2
3,157,988	+		OHPLBJKB_03027	0.55	-1.9
3,157,988	+		OHPLBJKB_03027	0.55	-1.8
3,158,257	+		OHPLBJKB_03027	0.71	-0.6
3,158,258	-		OHPLBJKB_03027	0.71	-2.6
3,158,258	-		OHPLBJKB_03027	0.71	-1.6
3,158,265	-		OHPLBJKB_03027	0.72	-3.4
3,158,297	+		OHPLBJKB_03027	0.74	-1.3
3,158,468	+		OHPLBJKB_03027	0.84	-1.3
3,158,468	+		OHPLBJKB_03027	0.84	-1.7
3,158,469	-		OHPLBJKB_03027	0.84	-3.0
3,158,482	+		OHPLBJKB_03027	0.85	-0.9
3,158,482	+		OHPLBJKB_03027	0.85	-1.3
3,158,482	+		OHPLBJKB_03027	0.85	-1.7
3,158,482	+		OHPLBJKB_03027	0.85	-2.3
3,158,482	+		OHPLBJKB_03027	0.85	-0.3
3,158,482	+		OHPLBJKB_03027	0.85	-2.7
3,158,482	+		OHPLBJKB_03027	0.85	-4.2
3,158,483	-		OHPLBJKB_03027	0.85	-1.7
3,158,483	-		OHPLBJKB_03027	0.85	-0.6
3,158,483	-		OHPLBJKB_03027	0.85	-2.0
3,158,483	-		OHPLBJKB_03027	0.85	-2.5
3,158,483	-		OHPLBJKB_03027	0.85	-1.6
3,158,483	-		OHPLBJKB_03027	0.85	-2.0
3,158,483	-		OHPLBJKB_03027	0.85	-0.6
3,158,483	-		OHPLBJKB_03027	0.85	-2.8
3,158,643	+				-0.7
3,158,644	-				-2.2
3,158,647	+				-2.3
3,158,647	+				-0.6
3,158,647	+				-1.8
3,158,647	+				-2.3
3,158,647	+				-0.9
3,158,647	+				-2.5
3,158,647	+				-1.9
3,158,647	+				-2.7
3,158,647	+				-2.5
3,158,647	+				-1.5
3,158,648	-				-2.9
3,158,648	-				-0.5
3,158,648	-				-1.3
3,158,648	-				-2.7
3,158,648	-				-1.7
3,158,648	-				-1.2
3,158,648	-				-2.9
3,158,650	+				-0.9
3,158,753	+				-2.1
3,158,757	+				-0.9
3,158,758	-				+0.5
3,158,864	+		OHPLBJKB_03028	0.21	-2.3
3,158,940	-		OHPLBJKB_03028	0.34	-2.3
3,159,002	+		OHPLBJKB_03028	0.46	+0.1
3,159,002	+		OHPLBJKB_03028	0.46	-1.1
3,159,002	+		OHPLBJKB_03028	0.46	-2.4
3,159,004	+		OHPLBJKB_03028	0.46	-0.9
3,159,004	+		OHPLBJKB_03028	0.46	-0.4
3,159,005	-		OHPLBJKB_03028	0.46	+0.3
3,159,005	-		OHPLBJKB_03028	0.46	-0.7
3,159,005	-		OHPLBJKB_03028	0.46	+0.7
3,159,005	-		OHPLBJKB_03028	0.46	-2.0
3,159,005	-		OHPLBJKB_03028	0.46	+0.1
3,159,009	+		OHPLBJKB_03028	0.47	+0.6
3,159,010	-		OHPLBJKB_03028	0.47	+0.3
3,159,010	-		OHPLBJKB_03028	0.47	-0.9
3,159,010	-		OHPLBJKB_03028	0.47	-1.8
3,159,010	-		OHPLBJKB_03028	0.47	+1.2
3,159,010	-		OHPLBJKB_03028	0.47	+1.2
3,159,025	-		OHPLBJKB_03028	0.50	-0.6
3,159,204	+		OHPLBJKB_03028	0.83	-2.3
3,159,204	+		OHPLBJKB_03028	0.83	-2.2
3,159,205	-		OHPLBJKB_03028	0.83	-1.1
3,159,205	-		OHPLBJKB_03028	0.83	-1.8
3,159,205	-		OHPLBJKB_03028	0.83	-0.8
3,159,243	+				-0.1
3,159,244	-				+0.7
3,159,259	-				-0.3
3,159,259	-				-0.9
3,159,259	-				-0.5
3,159,260	+				-1.1
3,159,260	+				-3.1
3,159,260	+				-1.3
3,159,260	+				-1.7
3,159,260	+				-1.6
3,159,260	+				-0.4
3,159,261	-				-0.6
3,159,261	-				-1.2
3,159,261	-				-1.6
3,159,261	-				-0.8
3,159,261	-				-0.1
3,159,261	-				+0.2
3,159,261	-				-0.6
3,159,261	-				-0.4
3,159,267	-				-1.2
3,159,267	-				-0.6
3,159,300	+				-0.1
3,159,300	+				-0.2
3,159,300	+				-1.3
3,159,301	-				-1.3
3,159,301	-				-0.1
3,159,301	-				-0.8
3,159,318	+				-2.3
3,159,318	+				-0.9
3,159,326	+				-1.1
3,159,327	-				-0.2
3,159,342	+				+0.2
3,159,343	-				-0.6
3,159,343	-				-0.7
3,159,343	-				-0.6
3,159,343	-				+0.1
3,159,344	+				-0.7
3,159,344	+				-0.8
3,159,345	-				-0.1
3,159,345	-				-0.3
3,159,345	-				-0.7
3,159,345	-				-0.1
3,159,345	-				+0.9
3,159,350	+				-1.3
3,159,351	-				-1.0
3,159,351	-				-0.5
3,159,351	-				-0.4
3,159,409	-				-0.1
3,159,442	+				+0.3
3,159,442	+				-0.6
3,159,442	+				+0.4
3,159,442	+				-0.5
3,159,442	+				-3.2
3,159,442	+				-0.3
3,159,442	+				-0.2
3,159,442	+				+1.1
3,159,442	+				+0.5
3,159,443	-				-0.6
3,159,443	-				+0.1
3,159,443	-				-0.1
3,159,443	-				-0.2
3,159,443	-				+0.9
3,159,443	-				-0.5
3,159,446	-				-0.5
3,159,526	+				-1.2
3,159,527	-				+0.4
3,159,527	-				-1.0
3,159,527	-				+0.3
3,159,527	-				+0.5
3,159,527	-				-0.4
3,159,563	-		OHPLBJKB_03029	0.11	-0.4
3,159,613	+		OHPLBJKB_03029	0.17	-0.6
3,159,613	+		OHPLBJKB_03029	0.17	-1.0
3,159,614	-		OHPLBJKB_03029	0.17	-0.9
3,159,614	-		OHPLBJKB_03029	0.17	-0.0
3,159,671	+		OHPLBJKB_03029	0.25	+0.0
3,159,672	-		OHPLBJKB_03029	0.25	-0.9
3,159,700	+		OHPLBJKB_03029	0.28	-0.7