Experiment: T4 MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02776 and OHPLBJKB_02777 are separated by 10 nucleotides OHPLBJKB_02777 and OHPLBJKB_02778 are separated by 154 nucleotides
OHPLBJKB_02776: OHPLBJKB_02776 - Replication-associated recombination protein A, at 2,902,958 to 2,904,301
_02776
OHPLBJKB_02777: OHPLBJKB_02777 - Outer-membrane lipoprotein carrier protein, at 2,904,312 to 2,904,923
_02777
OHPLBJKB_02778: OHPLBJKB_02778 - DNA translocase FtsK, at 2,905,078 to 2,909,067
_02778
Position (kb)
2904
2905 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2903.433 kb on + strand, within OHPLBJKB_02776 at 2903.435 kb on + strand, within OHPLBJKB_02776 at 2903.435 kb on + strand, within OHPLBJKB_02776 at 2903.476 kb on - strand, within OHPLBJKB_02776 at 2903.512 kb on + strand, within OHPLBJKB_02776 at 2903.513 kb on - strand, within OHPLBJKB_02776 at 2903.569 kb on + strand, within OHPLBJKB_02776 at 2903.594 kb on + strand, within OHPLBJKB_02776 at 2903.595 kb on - strand, within OHPLBJKB_02776 at 2903.624 kb on - strand, within OHPLBJKB_02776 at 2903.666 kb on + strand, within OHPLBJKB_02776 at 2903.734 kb on + strand, within OHPLBJKB_02776 at 2903.749 kb on - strand, within OHPLBJKB_02776 at 2903.780 kb on + strand, within OHPLBJKB_02776 at 2903.780 kb on + strand, within OHPLBJKB_02776 at 2903.781 kb on - strand, within OHPLBJKB_02776 at 2903.781 kb on - strand, within OHPLBJKB_02776 at 2903.784 kb on - strand, within OHPLBJKB_02776 at 2903.784 kb on - strand, within OHPLBJKB_02776 at 2903.804 kb on - strand, within OHPLBJKB_02776 at 2903.823 kb on + strand, within OHPLBJKB_02776 at 2903.914 kb on + strand, within OHPLBJKB_02776 at 2903.914 kb on + strand, within OHPLBJKB_02776 at 2903.914 kb on + strand, within OHPLBJKB_02776 at 2903.915 kb on - strand, within OHPLBJKB_02776 at 2903.915 kb on - strand, within OHPLBJKB_02776 at 2903.915 kb on - strand, within OHPLBJKB_02776 at 2904.061 kb on + strand, within OHPLBJKB_02776 at 2904.061 kb on + strand, within OHPLBJKB_02776 at 2904.062 kb on - strand, within OHPLBJKB_02776 at 2904.145 kb on + strand, within OHPLBJKB_02776 at 2904.145 kb on + strand, within OHPLBJKB_02776 at 2904.146 kb on - strand, within OHPLBJKB_02776 at 2904.146 kb on - strand, within OHPLBJKB_02776 at 2904.146 kb on - strand, within OHPLBJKB_02776 at 2904.152 kb on + strand, within OHPLBJKB_02776 at 2904.152 kb on + strand, within OHPLBJKB_02776 at 2904.153 kb on - strand, within OHPLBJKB_02776 at 2904.219 kb on + strand at 2904.219 kb on + strand at 2904.219 kb on + strand at 2904.219 kb on + strand at 2904.219 kb on + strand at 2904.219 kb on + strand at 2904.219 kb on + strand at 2904.219 kb on + strand at 2904.220 kb on - strand at 2904.220 kb on - strand at 2904.220 kb on - strand at 2904.220 kb on - strand at 2904.220 kb on - strand at 2904.220 kb on - strand at 2904.220 kb on - strand at 2904.314 kb on - strand at 2904.314 kb on - strand at 2904.317 kb on + strand at 2904.317 kb on + strand at 2904.317 kb on + strand at 2904.317 kb on + strand at 2904.318 kb on - strand at 2904.318 kb on - strand at 2904.318 kb on - strand at 2904.318 kb on - strand at 2904.940 kb on - strand at 2904.988 kb on - strand at 2905.013 kb on - strand at 2905.030 kb on + strand at 2905.030 kb on + strand at 2905.030 kb on + strand at 2905.030 kb on + strand at 2905.031 kb on - strand at 2905.075 kb on + strand at 2905.075 kb on + strand at 2905.076 kb on - strand at 2905.076 kb on - strand at 2905.080 kb on - strand at 2905.579 kb on - strand, within OHPLBJKB_02778
Per-strain Table
Position Strand Gene LocusTag Fraction T4 MOI10 remove 2,903,433 + OHPLBJKB_02776 0.35 -0.5 2,903,435 + OHPLBJKB_02776 0.35 -0.2 2,903,435 + OHPLBJKB_02776 0.35 -2.8 2,903,476 - OHPLBJKB_02776 0.39 -0.7 2,903,512 + OHPLBJKB_02776 0.41 +0.2 2,903,513 - OHPLBJKB_02776 0.41 -1.4 2,903,569 + OHPLBJKB_02776 0.45 -0.4 2,903,594 + OHPLBJKB_02776 0.47 -0.5 2,903,595 - OHPLBJKB_02776 0.47 +1.2 2,903,624 - OHPLBJKB_02776 0.50 -1.4 2,903,666 + OHPLBJKB_02776 0.53 -0.3 2,903,734 + OHPLBJKB_02776 0.58 +0.9 2,903,749 - OHPLBJKB_02776 0.59 +0.3 2,903,780 + OHPLBJKB_02776 0.61 -0.5 2,903,780 + OHPLBJKB_02776 0.61 +0.8 2,903,781 - OHPLBJKB_02776 0.61 +0.4 2,903,781 - OHPLBJKB_02776 0.61 -0.9 2,903,784 - OHPLBJKB_02776 0.61 +0.5 2,903,784 - OHPLBJKB_02776 0.61 -0.2 2,903,804 - OHPLBJKB_02776 0.63 +0.1 2,903,823 + OHPLBJKB_02776 0.64 +0.1 2,903,914 + OHPLBJKB_02776 0.71 -1.3 2,903,914 + OHPLBJKB_02776 0.71 +0.4 2,903,914 + OHPLBJKB_02776 0.71 +2.2 2,903,915 - OHPLBJKB_02776 0.71 -0.7 2,903,915 - OHPLBJKB_02776 0.71 +0.4 2,903,915 - OHPLBJKB_02776 0.71 +0.1 2,904,061 + OHPLBJKB_02776 0.82 +0.1 2,904,061 + OHPLBJKB_02776 0.82 +0.2 2,904,062 - OHPLBJKB_02776 0.82 -1.3 2,904,145 + OHPLBJKB_02776 0.88 +0.6 2,904,145 + OHPLBJKB_02776 0.88 -0.4 2,904,146 - OHPLBJKB_02776 0.88 -1.5 2,904,146 - OHPLBJKB_02776 0.88 -1.1 2,904,146 - OHPLBJKB_02776 0.88 -0.2 2,904,152 + OHPLBJKB_02776 0.89 -0.6 2,904,152 + OHPLBJKB_02776 0.89 -1.0 2,904,153 - OHPLBJKB_02776 0.89 -0.2 2,904,219 + +0.0 2,904,219 + -0.3 2,904,219 + -0.6 2,904,219 + -0.6 2,904,219 + +0.3 2,904,219 + -0.7 2,904,219 + -0.0 2,904,219 + +0.2 2,904,220 - -0.4 2,904,220 - -0.2 2,904,220 - -0.7 2,904,220 - +0.1 2,904,220 - +0.7 2,904,220 - +0.7 2,904,220 - -0.8 2,904,314 - +0.9 2,904,314 - +0.3 2,904,317 + -0.2 2,904,317 + -0.5 2,904,317 + -0.2 2,904,317 + +0.5 2,904,318 - -0.8 2,904,318 - +1.3 2,904,318 - +0.6 2,904,318 - -0.2 2,904,940 - -0.2 2,904,988 - +0.5 2,905,013 - -0.0 2,905,030 + -0.5 2,905,030 + -0.7 2,905,030 + -0.2 2,905,030 + +0.4 2,905,031 - -0.1 2,905,075 + +0.4 2,905,075 + -0.2 2,905,076 - +0.0 2,905,076 - -0.8 2,905,080 - +0.4 2,905,579 - OHPLBJKB_02778 0.13 -0.8
Or see this region's nucleotide sequence