Experiment: Pullulan 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05607 and BACOVA_05608 are separated by 30 nucleotides BACOVA_05608 and BACOVA_05609 are separated by 84 nucleotides
BACOVA_05607: BACOVA_05607 - hypothetical protein, at 1,124,039 to 1,126,405
_05607
BACOVA_05608: BACOVA_05608 - hypothetical protein, at 1,126,436 to 1,126,540
_05608
BACOVA_05609: BACOVA_05609 - hypothetical protein, at 1,126,625 to 1,127,995
_05609
Position (kb)
1126
1127 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1125.497 kb on + strand, within BACOVA_05607 at 1125.533 kb on - strand, within BACOVA_05607 at 1125.564 kb on - strand, within BACOVA_05607 at 1125.564 kb on - strand, within BACOVA_05607 at 1125.577 kb on - strand, within BACOVA_05607 at 1125.596 kb on + strand, within BACOVA_05607 at 1125.597 kb on - strand, within BACOVA_05607 at 1125.598 kb on + strand, within BACOVA_05607 at 1125.599 kb on - strand, within BACOVA_05607 at 1125.651 kb on - strand, within BACOVA_05607 at 1125.652 kb on + strand, within BACOVA_05607 at 1125.653 kb on - strand, within BACOVA_05607 at 1125.685 kb on + strand, within BACOVA_05607 at 1125.689 kb on - strand, within BACOVA_05607 at 1125.708 kb on + strand, within BACOVA_05607 at 1125.709 kb on - strand, within BACOVA_05607 at 1125.770 kb on - strand, within BACOVA_05607 at 1125.796 kb on + strand, within BACOVA_05607 at 1125.797 kb on - strand, within BACOVA_05607 at 1125.903 kb on - strand, within BACOVA_05607 at 1125.932 kb on - strand, within BACOVA_05607 at 1125.993 kb on + strand, within BACOVA_05607 at 1125.993 kb on + strand, within BACOVA_05607 at 1125.997 kb on + strand, within BACOVA_05607 at 1125.998 kb on - strand, within BACOVA_05607 at 1126.004 kb on + strand, within BACOVA_05607 at 1126.042 kb on + strand, within BACOVA_05607 at 1126.043 kb on - strand, within BACOVA_05607 at 1126.043 kb on - strand, within BACOVA_05607 at 1126.104 kb on - strand, within BACOVA_05607 at 1126.105 kb on + strand, within BACOVA_05607 at 1126.155 kb on + strand, within BACOVA_05607 at 1126.156 kb on - strand, within BACOVA_05607 at 1126.156 kb on - strand, within BACOVA_05607 at 1126.248 kb on + strand at 1126.280 kb on + strand at 1126.280 kb on + strand at 1126.316 kb on + strand at 1126.350 kb on + strand at 1126.362 kb on + strand at 1126.363 kb on - strand at 1126.363 kb on - strand at 1126.394 kb on - strand at 1126.494 kb on + strand, within BACOVA_05608 at 1126.495 kb on - strand, within BACOVA_05608 at 1126.505 kb on - strand, within BACOVA_05608 at 1126.511 kb on + strand, within BACOVA_05608 at 1126.519 kb on + strand, within BACOVA_05608 at 1126.519 kb on + strand, within BACOVA_05608 at 1126.520 kb on - strand, within BACOVA_05608 at 1126.584 kb on - strand at 1126.584 kb on - strand at 1126.584 kb on - strand at 1126.656 kb on + strand at 1126.695 kb on + strand at 1126.739 kb on - strand at 1126.800 kb on - strand, within BACOVA_05609 at 1126.801 kb on + strand, within BACOVA_05609 at 1126.802 kb on - strand, within BACOVA_05609 at 1126.814 kb on - strand, within BACOVA_05609 at 1126.816 kb on + strand, within BACOVA_05609 at 1126.816 kb on + strand, within BACOVA_05609 at 1126.855 kb on - strand, within BACOVA_05609 at 1126.904 kb on - strand, within BACOVA_05609 at 1126.967 kb on + strand, within BACOVA_05609 at 1126.969 kb on + strand, within BACOVA_05609 at 1126.970 kb on - strand, within BACOVA_05609 at 1126.972 kb on + strand, within BACOVA_05609 at 1126.972 kb on + strand, within BACOVA_05609 at 1126.972 kb on + strand, within BACOVA_05609 at 1127.023 kb on + strand, within BACOVA_05609 at 1127.093 kb on - strand, within BACOVA_05609 at 1127.137 kb on + strand, within BACOVA_05609 at 1127.137 kb on + strand, within BACOVA_05609 at 1127.215 kb on + strand, within BACOVA_05609 at 1127.215 kb on + strand, within BACOVA_05609 at 1127.216 kb on - strand, within BACOVA_05609 at 1127.216 kb on - strand, within BACOVA_05609 at 1127.251 kb on + strand, within BACOVA_05609 at 1127.251 kb on + strand, within BACOVA_05609 at 1127.253 kb on + strand, within BACOVA_05609 at 1127.254 kb on - strand, within BACOVA_05609 at 1127.317 kb on + strand, within BACOVA_05609 at 1127.318 kb on - strand, within BACOVA_05609 at 1127.331 kb on + strand, within BACOVA_05609 at 1127.335 kb on - strand, within BACOVA_05609 at 1127.344 kb on - strand, within BACOVA_05609 at 1127.348 kb on - strand, within BACOVA_05609 at 1127.352 kb on + strand, within BACOVA_05609 at 1127.352 kb on + strand, within BACOVA_05609 at 1127.353 kb on - strand, within BACOVA_05609 at 1127.369 kb on - strand, within BACOVA_05609 at 1127.401 kb on + strand, within BACOVA_05609 at 1127.407 kb on + strand, within BACOVA_05609 at 1127.447 kb on - strand, within BACOVA_05609 at 1127.460 kb on + strand, within BACOVA_05609 at 1127.504 kb on - strand, within BACOVA_05609 at 1127.508 kb on + strand, within BACOVA_05609
Per-strain Table
Position Strand Gene LocusTag Fraction Pullulan 2.5 mg/mL (C) remove 1,125,497 + BACOVA_05607 0.62 -1.4 1,125,533 - BACOVA_05607 0.63 +1.8 1,125,564 - BACOVA_05607 0.64 -1.7 1,125,564 - BACOVA_05607 0.64 -1.7 1,125,577 - BACOVA_05607 0.65 -1.8 1,125,596 + BACOVA_05607 0.66 -0.8 1,125,597 - BACOVA_05607 0.66 +0.9 1,125,598 + BACOVA_05607 0.66 +0.9 1,125,599 - BACOVA_05607 0.66 -0.6 1,125,651 - BACOVA_05607 0.68 +1.5 1,125,652 + BACOVA_05607 0.68 -0.4 1,125,653 - BACOVA_05607 0.68 +0.5 1,125,685 + BACOVA_05607 0.70 +1.4 1,125,689 - BACOVA_05607 0.70 -1.6 1,125,708 + BACOVA_05607 0.71 +0.1 1,125,709 - BACOVA_05607 0.71 -1.8 1,125,770 - BACOVA_05607 0.73 -2.2 1,125,796 + BACOVA_05607 0.74 -0.6 1,125,797 - BACOVA_05607 0.74 +0.2 1,125,903 - BACOVA_05607 0.79 -1.7 1,125,932 - BACOVA_05607 0.80 -1.7 1,125,993 + BACOVA_05607 0.83 -1.9 1,125,993 + BACOVA_05607 0.83 +0.1 1,125,997 + BACOVA_05607 0.83 -2.2 1,125,998 - BACOVA_05607 0.83 -0.5 1,126,004 + BACOVA_05607 0.83 -1.0 1,126,042 + BACOVA_05607 0.85 -0.1 1,126,043 - BACOVA_05607 0.85 -0.5 1,126,043 - BACOVA_05607 0.85 -1.8 1,126,104 - BACOVA_05607 0.87 +0.4 1,126,105 + BACOVA_05607 0.87 -0.6 1,126,155 + BACOVA_05607 0.89 -1.9 1,126,156 - BACOVA_05607 0.89 -3.4 1,126,156 - BACOVA_05607 0.89 -1.9 1,126,248 + -0.1 1,126,280 + +0.5 1,126,280 + -0.1 1,126,316 + -0.1 1,126,350 + -0.3 1,126,362 + -1.5 1,126,363 - -2.9 1,126,363 - +0.7 1,126,394 - +1.5 1,126,494 + BACOVA_05608 0.55 +0.8 1,126,495 - BACOVA_05608 0.56 +0.9 1,126,505 - BACOVA_05608 0.66 -0.8 1,126,511 + BACOVA_05608 0.71 +3.7 1,126,519 + BACOVA_05608 0.79 -1.0 1,126,519 + BACOVA_05608 0.79 -2.0 1,126,520 - BACOVA_05608 0.80 -1.8 1,126,584 - -0.1 1,126,584 - +0.1 1,126,584 - -0.5 1,126,656 + +0.1 1,126,695 + +0.5 1,126,739 - -0.1 1,126,800 - BACOVA_05609 0.13 +2.6 1,126,801 + BACOVA_05609 0.13 -3.6 1,126,802 - BACOVA_05609 0.13 -0.7 1,126,814 - BACOVA_05609 0.14 -0.9 1,126,816 + BACOVA_05609 0.14 -0.9 1,126,816 + BACOVA_05609 0.14 +1.1 1,126,855 - BACOVA_05609 0.17 -1.5 1,126,904 - BACOVA_05609 0.20 +2.5 1,126,967 + BACOVA_05609 0.25 -0.4 1,126,969 + BACOVA_05609 0.25 +1.9 1,126,970 - BACOVA_05609 0.25 -1.5 1,126,972 + BACOVA_05609 0.25 -0.0 1,126,972 + BACOVA_05609 0.25 +1.9 1,126,972 + BACOVA_05609 0.25 -0.1 1,127,023 + BACOVA_05609 0.29 +1.8 1,127,093 - BACOVA_05609 0.34 -1.6 1,127,137 + BACOVA_05609 0.37 +1.2 1,127,137 + BACOVA_05609 0.37 -0.8 1,127,215 + BACOVA_05609 0.43 -2.2 1,127,215 + BACOVA_05609 0.43 -0.1 1,127,216 - BACOVA_05609 0.43 +0.8 1,127,216 - BACOVA_05609 0.43 -0.3 1,127,251 + BACOVA_05609 0.46 +0.2 1,127,251 + BACOVA_05609 0.46 -0.2 1,127,253 + BACOVA_05609 0.46 -1.2 1,127,254 - BACOVA_05609 0.46 +4.2 1,127,317 + BACOVA_05609 0.50 +1.0 1,127,318 - BACOVA_05609 0.51 -0.7 1,127,331 + BACOVA_05609 0.51 +0.7 1,127,335 - BACOVA_05609 0.52 -2.8 1,127,344 - BACOVA_05609 0.52 -1.4 1,127,348 - BACOVA_05609 0.53 +1.4 1,127,352 + BACOVA_05609 0.53 -1.4 1,127,352 + BACOVA_05609 0.53 +2.3 1,127,353 - BACOVA_05609 0.53 -0.3 1,127,369 - BACOVA_05609 0.54 -0.7 1,127,401 + BACOVA_05609 0.57 +2.6 1,127,407 + BACOVA_05609 0.57 +3.1 1,127,447 - BACOVA_05609 0.60 +0.2 1,127,460 + BACOVA_05609 0.61 -1.5 1,127,504 - BACOVA_05609 0.64 -0.7 1,127,508 + BACOVA_05609 0.64 -0.4
Or see this region's nucleotide sequence