Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04768

Experiment: Pullulan 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04766 and BACOVA_04767 are separated by 26 nucleotidesBACOVA_04767 and BACOVA_04768 overlap by 4 nucleotidesBACOVA_04768 and BACOVA_04769 are separated by 20 nucleotidesBACOVA_04769 and BACOVA_04770 are separated by 11 nucleotides BACOVA_04766: BACOVA_04766 - hypothetical protein, at 120,867 to 121,523 _04766 BACOVA_04767: BACOVA_04767 - hypothetical protein, at 121,550 to 122,074 _04767 BACOVA_04768: BACOVA_04768 - conjugative transposon TraN protein, at 122,071 to 122,922 _04768 BACOVA_04769: BACOVA_04769 - DNA (cytosine-5-)-methyltransferase, at 122,943 to 123,746 _04769 BACOVA_04770: BACOVA_04770 - conjugative transposon TraM protein, at 123,758 to 124,933 _04770 Position (kb) 122 123Strain fitness (log2 ratio) -2 -1 0 1 2 3at 121.081 kb on + strand, within BACOVA_04766at 121.081 kb on + strand, within BACOVA_04766at 121.112 kb on + strand, within BACOVA_04766at 121.114 kb on + strand, within BACOVA_04766at 121.114 kb on + strand, within BACOVA_04766at 121.186 kb on + strand, within BACOVA_04766at 121.378 kb on + strand, within BACOVA_04766at 121.378 kb on + strand, within BACOVA_04766at 121.388 kb on - strand, within BACOVA_04766at 121.418 kb on + strand, within BACOVA_04766at 121.418 kb on + strand, within BACOVA_04766at 121.419 kb on - strand, within BACOVA_04766at 121.419 kb on - strand, within BACOVA_04766at 121.446 kb on + strand, within BACOVA_04766at 121.518 kb on + strandat 121.518 kb on + strandat 121.519 kb on - strandat 121.610 kb on + strand, within BACOVA_04767at 121.610 kb on + strand, within BACOVA_04767at 121.782 kb on + strand, within BACOVA_04767at 121.837 kb on + strand, within BACOVA_04767at 121.905 kb on + strand, within BACOVA_04767at 121.923 kb on + strand, within BACOVA_04767at 122.304 kb on + strand, within BACOVA_04768at 122.420 kb on + strand, within BACOVA_04768at 122.424 kb on + strand, within BACOVA_04768at 122.425 kb on - strand, within BACOVA_04768at 122.552 kb on + strand, within BACOVA_04768at 122.616 kb on - strand, within BACOVA_04768at 122.616 kb on - strand, within BACOVA_04768at 122.627 kb on + strand, within BACOVA_04768at 122.627 kb on + strand, within BACOVA_04768at 122.628 kb on - strand, within BACOVA_04768at 122.760 kb on + strand, within BACOVA_04768at 122.840 kb on + strandat 122.840 kb on + strandat 122.840 kb on + strandat 122.841 kb on - strandat 122.841 kb on - strandat 122.841 kb on - strandat 122.841 kb on - strandat 122.904 kb on + strandat 122.905 kb on - strandat 122.905 kb on - strandat 122.909 kb on - strandat 123.157 kb on + strand, within BACOVA_04769at 123.162 kb on + strand, within BACOVA_04769at 123.193 kb on + strand, within BACOVA_04769at 123.370 kb on + strand, within BACOVA_04769at 123.372 kb on + strand, within BACOVA_04769at 123.710 kb on + strandat 123.719 kb on + strandat 123.722 kb on + strandat 123.722 kb on + strandat 123.722 kb on + strandat 123.722 kb on + strandat 123.724 kb on + strandat 123.725 kb on - strandat 123.726 kb on + strandat 123.726 kb on + strandat 123.726 kb on + strandat 123.812 kb on + strandat 123.812 kb on + strandat 123.812 kb on + strandat 123.829 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan 2.5 mg/mL (C)
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121,081 + BACOVA_04766 0.33 -1.4
121,081 + BACOVA_04766 0.33 +1.1
121,112 + BACOVA_04766 0.37 -1.9
121,114 + BACOVA_04766 0.38 +0.1
121,114 + BACOVA_04766 0.38 -1.5
121,186 + BACOVA_04766 0.49 -0.9
121,378 + BACOVA_04766 0.78 -2.6
121,378 + BACOVA_04766 0.78 -0.9
121,388 - BACOVA_04766 0.79 +0.2
121,418 + BACOVA_04766 0.84 +1.5
121,418 + BACOVA_04766 0.84 -1.6
121,419 - BACOVA_04766 0.84 -0.4
121,419 - BACOVA_04766 0.84 -0.2
121,446 + BACOVA_04766 0.88 -1.6
121,518 + +0.0
121,518 + -1.3
121,519 - -0.8
121,610 + BACOVA_04767 0.11 +0.8
121,610 + BACOVA_04767 0.11 -1.0
121,782 + BACOVA_04767 0.44 -0.5
121,837 + BACOVA_04767 0.55 +2.4
121,905 + BACOVA_04767 0.68 +0.0
121,923 + BACOVA_04767 0.71 -2.5
122,304 + BACOVA_04768 0.27 +0.3
122,420 + BACOVA_04768 0.41 +1.6
122,424 + BACOVA_04768 0.41 +1.2
122,425 - BACOVA_04768 0.42 +0.6
122,552 + BACOVA_04768 0.56 +0.8
122,616 - BACOVA_04768 0.64 -0.2
122,616 - BACOVA_04768 0.64 -1.0
122,627 + BACOVA_04768 0.65 -0.5
122,627 + BACOVA_04768 0.65 -1.1
122,628 - BACOVA_04768 0.65 +0.3
122,760 + BACOVA_04768 0.81 -0.1
122,840 + -0.2
122,840 + +1.4
122,840 + -1.1
122,841 - +1.0
122,841 - +0.8
122,841 - -1.2
122,841 - +0.2
122,904 + -1.3
122,905 - -0.4
122,905 - -0.7
122,909 - -0.5
123,157 + BACOVA_04769 0.27 +0.7
123,162 + BACOVA_04769 0.27 -1.5
123,193 + BACOVA_04769 0.31 -0.7
123,370 + BACOVA_04769 0.53 +3.2
123,372 + BACOVA_04769 0.53 +0.1
123,710 + +0.2
123,719 + -0.2
123,722 + +3.3
123,722 + -0.5
123,722 + -0.6
123,722 + -1.8
123,724 + -0.1
123,725 - +0.3
123,726 + -1.5
123,726 + +1.6
123,726 + +1.6
123,812 + -0.8
123,812 + +0.7
123,812 + +1.2
123,829 + -1.8

Or see this region's nucleotide sequence