Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03124

Experiment: Pullulan 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03123 and BACOVA_03124 are separated by 12 nucleotidesBACOVA_03124 and BACOVA_03125 overlap by 41 nucleotides BACOVA_03123: BACOVA_03123 - hypothetical protein, at 213,691 to 214,656 _03123 BACOVA_03124: BACOVA_03124 - arylsulfatase, at 214,669 to 216,243 _03124 BACOVA_03125: BACOVA_03125 - SusD family protein, at 216,203 to 217,705 _03125 Position (kb) 214 215 216 217Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 213.692 kb on + strandat 213.774 kb on + strandat 213.777 kb on + strandat 213.778 kb on - strandat 213.803 kb on + strand, within BACOVA_03123at 213.808 kb on - strand, within BACOVA_03123at 213.808 kb on - strand, within BACOVA_03123at 213.870 kb on + strand, within BACOVA_03123at 213.888 kb on + strand, within BACOVA_03123at 213.889 kb on - strand, within BACOVA_03123at 213.897 kb on + strand, within BACOVA_03123at 213.898 kb on - strand, within BACOVA_03123at 213.898 kb on - strand, within BACOVA_03123at 213.910 kb on + strand, within BACOVA_03123at 213.911 kb on - strand, within BACOVA_03123at 213.916 kb on + strand, within BACOVA_03123at 213.923 kb on + strand, within BACOVA_03123at 213.924 kb on - strand, within BACOVA_03123at 213.924 kb on - strand, within BACOVA_03123at 213.940 kb on + strand, within BACOVA_03123at 213.964 kb on + strand, within BACOVA_03123at 214.006 kb on + strand, within BACOVA_03123at 214.067 kb on + strand, within BACOVA_03123at 214.080 kb on + strand, within BACOVA_03123at 214.081 kb on - strand, within BACOVA_03123at 214.090 kb on + strand, within BACOVA_03123at 214.090 kb on + strand, within BACOVA_03123at 214.090 kb on + strand, within BACOVA_03123at 214.091 kb on - strand, within BACOVA_03123at 214.098 kb on - strand, within BACOVA_03123at 214.156 kb on - strand, within BACOVA_03123at 214.254 kb on + strand, within BACOVA_03123at 214.255 kb on - strand, within BACOVA_03123at 214.372 kb on + strand, within BACOVA_03123at 214.400 kb on - strand, within BACOVA_03123at 214.460 kb on + strand, within BACOVA_03123at 214.465 kb on + strand, within BACOVA_03123at 214.466 kb on - strand, within BACOVA_03123at 214.489 kb on + strand, within BACOVA_03123at 214.490 kb on - strand, within BACOVA_03123at 214.541 kb on - strand, within BACOVA_03123at 214.563 kb on + strandat 214.564 kb on - strandat 214.572 kb on - strandat 214.582 kb on + strandat 214.606 kb on - strandat 214.606 kb on - strandat 214.630 kb on + strandat 214.631 kb on - strandat 214.671 kb on - strandat 214.686 kb on + strandat 214.752 kb on + strandat 214.766 kb on + strandat 214.767 kb on - strandat 214.796 kb on + strandat 214.796 kb on + strandat 214.796 kb on + strandat 214.797 kb on - strandat 214.797 kb on - strandat 214.805 kb on - strandat 214.838 kb on + strand, within BACOVA_03124at 214.905 kb on - strand, within BACOVA_03124at 214.994 kb on - strand, within BACOVA_03124at 215.149 kb on - strand, within BACOVA_03124at 215.213 kb on - strand, within BACOVA_03124at 215.225 kb on + strand, within BACOVA_03124at 215.243 kb on - strand, within BACOVA_03124at 215.277 kb on + strand, within BACOVA_03124at 215.277 kb on + strand, within BACOVA_03124at 215.277 kb on + strand, within BACOVA_03124at 215.278 kb on - strand, within BACOVA_03124at 215.278 kb on - strand, within BACOVA_03124at 215.278 kb on - strand, within BACOVA_03124at 215.279 kb on + strand, within BACOVA_03124at 215.279 kb on + strand, within BACOVA_03124at 215.280 kb on - strand, within BACOVA_03124at 215.284 kb on - strand, within BACOVA_03124at 215.297 kb on + strand, within BACOVA_03124at 215.297 kb on + strand, within BACOVA_03124at 215.297 kb on + strand, within BACOVA_03124at 215.298 kb on - strand, within BACOVA_03124at 215.298 kb on - strand, within BACOVA_03124at 215.301 kb on + strand, within BACOVA_03124at 215.327 kb on + strand, within BACOVA_03124at 215.327 kb on + strand, within BACOVA_03124at 215.375 kb on + strand, within BACOVA_03124at 215.411 kb on - strand, within BACOVA_03124at 215.436 kb on - strand, within BACOVA_03124at 215.437 kb on + strand, within BACOVA_03124at 215.495 kb on - strand, within BACOVA_03124at 215.495 kb on - strand, within BACOVA_03124at 215.544 kb on + strand, within BACOVA_03124at 215.544 kb on + strand, within BACOVA_03124at 215.595 kb on + strand, within BACOVA_03124at 215.603 kb on + strand, within BACOVA_03124at 215.639 kb on + strand, within BACOVA_03124at 215.642 kb on + strand, within BACOVA_03124at 215.642 kb on + strand, within BACOVA_03124at 215.647 kb on + strand, within BACOVA_03124at 215.675 kb on + strand, within BACOVA_03124at 215.728 kb on + strand, within BACOVA_03124at 215.728 kb on + strand, within BACOVA_03124at 215.728 kb on + strand, within BACOVA_03124at 215.729 kb on - strand, within BACOVA_03124at 215.739 kb on + strand, within BACOVA_03124at 215.739 kb on + strand, within BACOVA_03124at 215.740 kb on - strand, within BACOVA_03124at 215.740 kb on - strand, within BACOVA_03124at 215.740 kb on - strand, within BACOVA_03124at 215.758 kb on - strand, within BACOVA_03124at 215.758 kb on - strand, within BACOVA_03124at 215.759 kb on + strand, within BACOVA_03124at 215.776 kb on + strand, within BACOVA_03124at 215.825 kb on - strand, within BACOVA_03124at 215.830 kb on - strand, within BACOVA_03124at 215.830 kb on - strand, within BACOVA_03124at 215.899 kb on - strand, within BACOVA_03124at 215.900 kb on + strand, within BACOVA_03124at 215.901 kb on - strand, within BACOVA_03124at 215.901 kb on - strand, within BACOVA_03124at 215.901 kb on - strand, within BACOVA_03124at 215.901 kb on - strand, within BACOVA_03124at 215.917 kb on + strand, within BACOVA_03124at 215.917 kb on + strand, within BACOVA_03124at 215.917 kb on + strand, within BACOVA_03124at 215.918 kb on - strand, within BACOVA_03124at 215.918 kb on - strand, within BACOVA_03124at 215.918 kb on - strand, within BACOVA_03124at 215.918 kb on - strand, within BACOVA_03124at 215.930 kb on - strand, within BACOVA_03124at 215.969 kb on + strand, within BACOVA_03124at 215.969 kb on + strand, within BACOVA_03124at 215.969 kb on + strand, within BACOVA_03124at 216.001 kb on + strand, within BACOVA_03124at 216.042 kb on - strand, within BACOVA_03124at 216.049 kb on + strand, within BACOVA_03124at 216.050 kb on - strand, within BACOVA_03124at 216.067 kb on - strand, within BACOVA_03124at 216.081 kb on + strand, within BACOVA_03124at 216.083 kb on + strand, within BACOVA_03124at 216.084 kb on - strand, within BACOVA_03124at 216.087 kb on + strandat 216.140 kb on - strandat 216.156 kb on + strandat 216.156 kb on + strandat 216.157 kb on - strandat 216.159 kb on - strandat 216.160 kb on + strandat 216.160 kb on + strandat 216.160 kb on + strandat 216.161 kb on - strandat 216.163 kb on + strandat 216.164 kb on - strandat 216.171 kb on - strandat 216.171 kb on - strandat 216.174 kb on + strandat 216.174 kb on + strandat 216.218 kb on - strandat 216.238 kb on + strandat 216.269 kb on + strandat 216.269 kb on + strandat 216.293 kb on - strandat 216.305 kb on - strandat 216.332 kb on - strandat 216.345 kb on - strandat 216.372 kb on - strand, within BACOVA_03125at 216.372 kb on - strand, within BACOVA_03125at 216.373 kb on + strand, within BACOVA_03125at 216.374 kb on - strand, within BACOVA_03125at 216.381 kb on + strand, within BACOVA_03125at 216.381 kb on + strand, within BACOVA_03125at 216.382 kb on - strand, within BACOVA_03125at 216.382 kb on - strand, within BACOVA_03125at 216.502 kb on + strand, within BACOVA_03125at 216.515 kb on + strand, within BACOVA_03125at 216.525 kb on + strand, within BACOVA_03125at 216.525 kb on + strand, within BACOVA_03125at 216.526 kb on - strand, within BACOVA_03125at 216.526 kb on - strand, within BACOVA_03125at 216.530 kb on - strand, within BACOVA_03125at 216.544 kb on + strand, within BACOVA_03125at 216.548 kb on + strand, within BACOVA_03125at 216.573 kb on + strand, within BACOVA_03125at 216.574 kb on - strand, within BACOVA_03125at 216.576 kb on - strand, within BACOVA_03125at 216.580 kb on + strand, within BACOVA_03125at 216.580 kb on + strand, within BACOVA_03125at 216.580 kb on + strand, within BACOVA_03125at 216.580 kb on + strand, within BACOVA_03125at 216.581 kb on - strand, within BACOVA_03125at 216.581 kb on - strand, within BACOVA_03125at 216.585 kb on - strand, within BACOVA_03125at 216.608 kb on - strand, within BACOVA_03125at 216.610 kb on + strand, within BACOVA_03125at 216.611 kb on - strand, within BACOVA_03125at 216.625 kb on + strand, within BACOVA_03125at 216.654 kb on + strand, within BACOVA_03125at 216.685 kb on + strand, within BACOVA_03125at 216.722 kb on - strand, within BACOVA_03125at 216.724 kb on - strand, within BACOVA_03125at 216.724 kb on - strand, within BACOVA_03125at 216.724 kb on - strand, within BACOVA_03125at 216.745 kb on + strand, within BACOVA_03125at 216.745 kb on + strand, within BACOVA_03125at 216.745 kb on + strand, within BACOVA_03125at 216.769 kb on + strand, within BACOVA_03125at 216.770 kb on - strand, within BACOVA_03125at 216.770 kb on - strand, within BACOVA_03125at 216.774 kb on - strand, within BACOVA_03125at 216.778 kb on - strand, within BACOVA_03125at 216.779 kb on + strand, within BACOVA_03125at 216.779 kb on + strand, within BACOVA_03125at 216.779 kb on + strand, within BACOVA_03125at 216.822 kb on + strand, within BACOVA_03125at 216.918 kb on + strand, within BACOVA_03125at 216.918 kb on + strand, within BACOVA_03125at 216.919 kb on - strand, within BACOVA_03125at 216.919 kb on - strand, within BACOVA_03125at 216.923 kb on + strand, within BACOVA_03125at 216.923 kb on + strand, within BACOVA_03125at 216.924 kb on - strand, within BACOVA_03125at 216.978 kb on + strand, within BACOVA_03125at 216.997 kb on - strand, within BACOVA_03125at 217.056 kb on + strand, within BACOVA_03125at 217.062 kb on + strand, within BACOVA_03125at 217.062 kb on + strand, within BACOVA_03125at 217.062 kb on + strand, within BACOVA_03125at 217.073 kb on + strand, within BACOVA_03125at 217.073 kb on + strand, within BACOVA_03125at 217.073 kb on + strand, within BACOVA_03125at 217.076 kb on + strand, within BACOVA_03125at 217.077 kb on - strand, within BACOVA_03125at 217.097 kb on - strand, within BACOVA_03125at 217.195 kb on + strand, within BACOVA_03125at 217.217 kb on + strand, within BACOVA_03125at 217.229 kb on - strand, within BACOVA_03125

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan 2.5 mg/mL (C)
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213,692 + +0.3
213,774 + -1.2
213,777 + -0.9
213,778 - -0.8
213,803 + BACOVA_03123 0.12 +1.3
213,808 - BACOVA_03123 0.12 -1.0
213,808 - BACOVA_03123 0.12 -0.7
213,870 + BACOVA_03123 0.19 -1.3
213,888 + BACOVA_03123 0.20 +0.6
213,889 - BACOVA_03123 0.20 +2.3
213,897 + BACOVA_03123 0.21 -1.8
213,898 - BACOVA_03123 0.21 -0.3
213,898 - BACOVA_03123 0.21 -0.3
213,910 + BACOVA_03123 0.23 -0.2
213,911 - BACOVA_03123 0.23 +1.3
213,916 + BACOVA_03123 0.23 -1.2
213,923 + BACOVA_03123 0.24 +1.1
213,924 - BACOVA_03123 0.24 -2.1
213,924 - BACOVA_03123 0.24 -1.4
213,940 + BACOVA_03123 0.26 -0.9
213,964 + BACOVA_03123 0.28 -2.1
214,006 + BACOVA_03123 0.33 -2.7
214,067 + BACOVA_03123 0.39 +0.7
214,080 + BACOVA_03123 0.40 +3.6
214,081 - BACOVA_03123 0.40 +0.7
214,090 + BACOVA_03123 0.41 +0.2
214,090 + BACOVA_03123 0.41 -0.1
214,090 + BACOVA_03123 0.41 +0.7
214,091 - BACOVA_03123 0.41 +0.9
214,098 - BACOVA_03123 0.42 -0.5
214,156 - BACOVA_03123 0.48 +2.2
214,254 + BACOVA_03123 0.58 -0.9
214,255 - BACOVA_03123 0.58 +0.9
214,372 + BACOVA_03123 0.70 +0.1
214,400 - BACOVA_03123 0.73 +0.1
214,460 + BACOVA_03123 0.80 -0.3
214,465 + BACOVA_03123 0.80 +0.1
214,466 - BACOVA_03123 0.80 -0.3
214,489 + BACOVA_03123 0.83 -0.6
214,490 - BACOVA_03123 0.83 -0.1
214,541 - BACOVA_03123 0.88 +2.9
214,563 + +0.1
214,564 - +0.5
214,572 - +0.1
214,582 + -1.7
214,606 - -2.5
214,606 - +0.1
214,630 + +1.2
214,631 - -1.3
214,671 - -1.0
214,686 + -1.0
214,752 + +0.7
214,766 + +0.4
214,767 - -1.3
214,796 + -1.3
214,796 + -1.1
214,796 + +3.5
214,797 - -1.7
214,797 - -1.7
214,805 - +0.1
214,838 + BACOVA_03124 0.11 -0.1
214,905 - BACOVA_03124 0.15 +1.1
214,994 - BACOVA_03124 0.21 +2.7
215,149 - BACOVA_03124 0.30 +0.9
215,213 - BACOVA_03124 0.35 -0.3
215,225 + BACOVA_03124 0.35 -0.5
215,243 - BACOVA_03124 0.36 -0.9
215,277 + BACOVA_03124 0.39 -0.5
215,277 + BACOVA_03124 0.39 -0.2
215,277 + BACOVA_03124 0.39 -0.5
215,278 - BACOVA_03124 0.39 -0.9
215,278 - BACOVA_03124 0.39 +3.0
215,278 - BACOVA_03124 0.39 -0.6
215,279 + BACOVA_03124 0.39 +1.6
215,279 + BACOVA_03124 0.39 -0.1
215,280 - BACOVA_03124 0.39 -0.3
215,284 - BACOVA_03124 0.39 -0.5
215,297 + BACOVA_03124 0.40 -1.1
215,297 + BACOVA_03124 0.40 -0.9
215,297 + BACOVA_03124 0.40 +1.4
215,298 - BACOVA_03124 0.40 +0.3
215,298 - BACOVA_03124 0.40 -2.3
215,301 + BACOVA_03124 0.40 +0.4
215,327 + BACOVA_03124 0.42 +1.5
215,327 + BACOVA_03124 0.42 -0.1
215,375 + BACOVA_03124 0.45 -0.8
215,411 - BACOVA_03124 0.47 -0.6
215,436 - BACOVA_03124 0.49 -0.1
215,437 + BACOVA_03124 0.49 +1.7
215,495 - BACOVA_03124 0.52 -1.1
215,495 - BACOVA_03124 0.52 -1.6
215,544 + BACOVA_03124 0.56 +4.4
215,544 + BACOVA_03124 0.56 -0.6
215,595 + BACOVA_03124 0.59 +0.0
215,603 + BACOVA_03124 0.59 -0.4
215,639 + BACOVA_03124 0.62 +0.0
215,642 + BACOVA_03124 0.62 -1.6
215,642 + BACOVA_03124 0.62 +2.1
215,647 + BACOVA_03124 0.62 +0.2
215,675 + BACOVA_03124 0.64 +0.5
215,728 + BACOVA_03124 0.67 +0.7
215,728 + BACOVA_03124 0.67 +1.1
215,728 + BACOVA_03124 0.67 -0.1
215,729 - BACOVA_03124 0.67 +3.2
215,739 + BACOVA_03124 0.68 -2.3
215,739 + BACOVA_03124 0.68 +1.3
215,740 - BACOVA_03124 0.68 -1.2
215,740 - BACOVA_03124 0.68 +0.3
215,740 - BACOVA_03124 0.68 -0.2
215,758 - BACOVA_03124 0.69 +0.1
215,758 - BACOVA_03124 0.69 -0.1
215,759 + BACOVA_03124 0.69 -0.3
215,776 + BACOVA_03124 0.70 +0.4
215,825 - BACOVA_03124 0.73 -3.3
215,830 - BACOVA_03124 0.74 -0.1
215,830 - BACOVA_03124 0.74 +1.1
215,899 - BACOVA_03124 0.78 -1.5
215,900 + BACOVA_03124 0.78 +0.5
215,901 - BACOVA_03124 0.78 -2.2
215,901 - BACOVA_03124 0.78 +0.7
215,901 - BACOVA_03124 0.78 -2.1
215,901 - BACOVA_03124 0.78 +3.3
215,917 + BACOVA_03124 0.79 +0.7
215,917 + BACOVA_03124 0.79 -2.9
215,917 + BACOVA_03124 0.79 +0.1
215,918 - BACOVA_03124 0.79 -0.5
215,918 - BACOVA_03124 0.79 -2.0
215,918 - BACOVA_03124 0.79 +0.6
215,918 - BACOVA_03124 0.79 -0.9
215,930 - BACOVA_03124 0.80 +0.5
215,969 + BACOVA_03124 0.83 +0.2
215,969 + BACOVA_03124 0.83 -2.7
215,969 + BACOVA_03124 0.83 -0.0
216,001 + BACOVA_03124 0.85 +3.7
216,042 - BACOVA_03124 0.87 -1.3
216,049 + BACOVA_03124 0.88 -1.9
216,050 - BACOVA_03124 0.88 -1.0
216,067 - BACOVA_03124 0.89 -0.6
216,081 + BACOVA_03124 0.90 -0.3
216,083 + BACOVA_03124 0.90 +1.0
216,084 - BACOVA_03124 0.90 -2.2
216,087 + -0.5
216,140 - +1.2
216,156 + +1.5
216,156 + -1.0
216,157 - -1.2
216,159 - -1.1
216,160 + +0.3
216,160 + -2.1
216,160 + +0.3
216,161 - -2.0
216,163 + +4.5
216,164 - -2.3
216,171 - +3.5
216,171 - -1.2
216,174 + -0.5
216,174 + +0.5
216,218 - +0.4
216,238 + +0.6
216,269 + -1.0
216,269 + +0.6
216,293 - -0.1
216,305 - -1.1
216,332 - -0.1
216,345 - +1.0
216,372 - BACOVA_03125 0.11 -0.8
216,372 - BACOVA_03125 0.11 -2.0
216,373 + BACOVA_03125 0.11 -0.1
216,374 - BACOVA_03125 0.11 -0.5
216,381 + BACOVA_03125 0.12 -3.3
216,381 + BACOVA_03125 0.12 +1.0
216,382 - BACOVA_03125 0.12 +0.8
216,382 - BACOVA_03125 0.12 -0.5
216,502 + BACOVA_03125 0.20 -3.3
216,515 + BACOVA_03125 0.21 +0.3
216,525 + BACOVA_03125 0.21 -1.8
216,525 + BACOVA_03125 0.21 +2.0
216,526 - BACOVA_03125 0.21 +0.8
216,526 - BACOVA_03125 0.21 -1.6
216,530 - BACOVA_03125 0.22 -1.6
216,544 + BACOVA_03125 0.23 +0.1
216,548 + BACOVA_03125 0.23 +1.5
216,573 + BACOVA_03125 0.25 -1.3
216,574 - BACOVA_03125 0.25 +0.1
216,576 - BACOVA_03125 0.25 +2.2
216,580 + BACOVA_03125 0.25 -0.8
216,580 + BACOVA_03125 0.25 +0.5
216,580 + BACOVA_03125 0.25 +0.4
216,580 + BACOVA_03125 0.25 -1.7
216,581 - BACOVA_03125 0.25 -0.1
216,581 - BACOVA_03125 0.25 +1.1
216,585 - BACOVA_03125 0.25 +0.0
216,608 - BACOVA_03125 0.27 +0.7
216,610 + BACOVA_03125 0.27 -0.1
216,611 - BACOVA_03125 0.27 -0.1
216,625 + BACOVA_03125 0.28 -1.4
216,654 + BACOVA_03125 0.30 -0.5
216,685 + BACOVA_03125 0.32 +0.7
216,722 - BACOVA_03125 0.35 +1.5
216,724 - BACOVA_03125 0.35 +0.1
216,724 - BACOVA_03125 0.35 +2.3
216,724 - BACOVA_03125 0.35 +1.1
216,745 + BACOVA_03125 0.36 -0.6
216,745 + BACOVA_03125 0.36 +0.7
216,745 + BACOVA_03125 0.36 +0.5
216,769 + BACOVA_03125 0.38 +0.7
216,770 - BACOVA_03125 0.38 -0.1
216,770 - BACOVA_03125 0.38 -2.0
216,774 - BACOVA_03125 0.38 -2.2
216,778 - BACOVA_03125 0.38 -0.5
216,779 + BACOVA_03125 0.38 -0.8
216,779 + BACOVA_03125 0.38 -0.1
216,779 + BACOVA_03125 0.38 -0.3
216,822 + BACOVA_03125 0.41 -3.9
216,918 + BACOVA_03125 0.48 +0.7
216,918 + BACOVA_03125 0.48 -0.0
216,919 - BACOVA_03125 0.48 +2.2
216,919 - BACOVA_03125 0.48 -3.2
216,923 + BACOVA_03125 0.48 -0.9
216,923 + BACOVA_03125 0.48 +1.0
216,924 - BACOVA_03125 0.48 -1.4
216,978 + BACOVA_03125 0.52 +1.4
216,997 - BACOVA_03125 0.53 -0.8
217,056 + BACOVA_03125 0.57 +1.4
217,062 + BACOVA_03125 0.57 +0.7
217,062 + BACOVA_03125 0.57 -0.3
217,062 + BACOVA_03125 0.57 +1.2
217,073 + BACOVA_03125 0.58 +0.4
217,073 + BACOVA_03125 0.58 -0.8
217,073 + BACOVA_03125 0.58 -3.3
217,076 + BACOVA_03125 0.58 +1.0
217,077 - BACOVA_03125 0.58 +1.4
217,097 - BACOVA_03125 0.59 +1.9
217,195 + BACOVA_03125 0.66 -0.1
217,217 + BACOVA_03125 0.67 -0.1
217,229 - BACOVA_03125 0.68 +1.7

Or see this region's nucleotide sequence