Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02577

Experiment: Pullulan 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02573 and BACOVA_02574 are separated by 13 nucleotidesBACOVA_02574 and BACOVA_02575 are separated by 226 nucleotidesBACOVA_02575 and BACOVA_02576 are separated by 35 nucleotidesBACOVA_02576 and BACOVA_02577 are separated by 143 nucleotidesBACOVA_02577 and BACOVA_02578 are separated by 162 nucleotidesBACOVA_02578 and BACOVA_02579 are separated by 120 nucleotidesBACOVA_02579 and BACOVA_02580 are separated by 63 nucleotides BACOVA_02573: BACOVA_02573 - hypothetical protein, at 341,982 to 342,491 _02573 BACOVA_02574: BACOVA_02574 - hypothetical protein, at 342,505 to 342,801 _02574 BACOVA_02575: BACOVA_02575 - tRNA-Pro, at 343,028 to 343,102 _02575 BACOVA_02576: BACOVA_02576 - tRNA-Pro, at 343,138 to 343,212 _02576 BACOVA_02577: BACOVA_02577 - hypothetical protein, at 343,356 to 343,523 _02577 BACOVA_02578: BACOVA_02578 - hypothetical protein, at 343,686 to 343,814 _02578 BACOVA_02579: BACOVA_02579 - hypothetical protein, at 343,935 to 344,141 _02579 BACOVA_02580: BACOVA_02580 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 344,205 to 345,476 _02580 Position (kb) 343 344Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 342.367 kb on - strand, within BACOVA_02573at 342.389 kb on + strand, within BACOVA_02573at 342.390 kb on - strand, within BACOVA_02573at 342.414 kb on + strand, within BACOVA_02573at 342.417 kb on - strand, within BACOVA_02573at 342.419 kb on - strand, within BACOVA_02573at 342.419 kb on - strand, within BACOVA_02573at 342.450 kb on + strandat 342.456 kb on + strandat 342.489 kb on - strandat 342.491 kb on + strandat 342.492 kb on - strandat 342.537 kb on - strand, within BACOVA_02574at 342.539 kb on + strand, within BACOVA_02574at 342.548 kb on - strand, within BACOVA_02574at 342.572 kb on - strand, within BACOVA_02574at 342.625 kb on - strand, within BACOVA_02574at 342.678 kb on - strand, within BACOVA_02574at 342.730 kb on - strand, within BACOVA_02574at 342.730 kb on - strand, within BACOVA_02574at 342.772 kb on + strandat 342.784 kb on - strandat 342.849 kb on + strandat 342.877 kb on + strandat 342.877 kb on + strandat 342.877 kb on + strandat 342.884 kb on - strandat 342.884 kb on - strandat 342.924 kb on - strandat 342.948 kb on - strandat 342.954 kb on - strandat 342.959 kb on - strandat 342.962 kb on + strandat 342.963 kb on - strandat 342.980 kb on - strandat 342.982 kb on + strandat 342.988 kb on + strandat 342.989 kb on - strandat 342.989 kb on - strandat 343.118 kb on - strandat 343.120 kb on + strandat 343.120 kb on + strandat 343.439 kb on + strand, within BACOVA_02577at 343.656 kb on + strandat 343.657 kb on - strandat 343.657 kb on - strandat 343.784 kb on + strand, within BACOVA_02578at 343.784 kb on + strand, within BACOVA_02578at 343.789 kb on + strand, within BACOVA_02578at 343.804 kb on - strandat 343.815 kb on - strandat 343.841 kb on - strandat 343.847 kb on - strandat 343.872 kb on + strandat 343.894 kb on + strandat 343.895 kb on - strandat 344.072 kb on + strand, within BACOVA_02579at 344.073 kb on - strand, within BACOVA_02579at 344.115 kb on - strand, within BACOVA_02579at 344.129 kb on + strandat 344.130 kb on - strandat 344.132 kb on + strandat 344.139 kb on + strandat 344.140 kb on - strandat 344.153 kb on - strandat 344.164 kb on + strandat 344.264 kb on + strandat 344.264 kb on + strandat 344.265 kb on - strandat 344.374 kb on - strand, within BACOVA_02580at 344.397 kb on + strand, within BACOVA_02580at 344.397 kb on + strand, within BACOVA_02580at 344.397 kb on + strand, within BACOVA_02580at 344.398 kb on - strand, within BACOVA_02580at 344.448 kb on - strand, within BACOVA_02580at 344.508 kb on + strand, within BACOVA_02580at 344.523 kb on + strand, within BACOVA_02580

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan 2.5 mg/mL (C)
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342,367 - BACOVA_02573 0.75 +1.6
342,389 + BACOVA_02573 0.80 -0.4
342,390 - BACOVA_02573 0.80 -0.4
342,414 + BACOVA_02573 0.85 -1.8
342,417 - BACOVA_02573 0.85 +0.1
342,419 - BACOVA_02573 0.86 -1.6
342,419 - BACOVA_02573 0.86 +0.8
342,450 + -2.9
342,456 + -0.8
342,489 - -0.4
342,491 + -1.3
342,492 - -0.8
342,537 - BACOVA_02574 0.11 -0.0
342,539 + BACOVA_02574 0.11 -0.8
342,548 - BACOVA_02574 0.14 -0.8
342,572 - BACOVA_02574 0.23 -0.4
342,625 - BACOVA_02574 0.40 +2.3
342,678 - BACOVA_02574 0.58 +0.2
342,730 - BACOVA_02574 0.76 -0.2
342,730 - BACOVA_02574 0.76 -1.2
342,772 + +0.4
342,784 - -1.5
342,849 + -1.6
342,877 + +0.1
342,877 + -0.4
342,877 + -1.4
342,884 - +0.4
342,884 - -2.3
342,924 - +0.9
342,948 - +0.3
342,954 - +0.1
342,959 - -1.1
342,962 + +0.7
342,963 - -0.1
342,980 - -2.2
342,982 + +1.0
342,988 + -0.1
342,989 - +2.7
342,989 - +0.1
343,118 - -1.7
343,120 + +1.1
343,120 + +2.7
343,439 + BACOVA_02577 0.49 +1.0
343,656 + +1.0
343,657 - -0.5
343,657 - +1.2
343,784 + BACOVA_02578 0.76 +2.6
343,784 + BACOVA_02578 0.76 -2.0
343,789 + BACOVA_02578 0.80 +1.5
343,804 - -1.1
343,815 - -2.8
343,841 - -0.2
343,847 - +0.1
343,872 + -0.9
343,894 + +0.2
343,895 - -0.0
344,072 + BACOVA_02579 0.66 -1.1
344,073 - BACOVA_02579 0.67 -3.1
344,115 - BACOVA_02579 0.87 +0.3
344,129 + -1.4
344,130 - +3.9
344,132 + +0.1
344,139 + +0.5
344,140 - -2.3
344,153 - -1.4
344,164 + -0.5
344,264 + -0.1
344,264 + -1.4
344,265 - +0.6
344,374 - BACOVA_02580 0.13 +0.5
344,397 + BACOVA_02580 0.15 +1.2
344,397 + BACOVA_02580 0.15 +0.4
344,397 + BACOVA_02580 0.15 -1.2
344,398 - BACOVA_02580 0.15 -0.0
344,448 - BACOVA_02580 0.19 +0.8
344,508 + BACOVA_02580 0.24 -1.3
344,523 + BACOVA_02580 0.25 +0.6

Or see this region's nucleotide sequence