Experiment: Pullulan 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01625 and BACOVA_01626 are separated by 90 nucleotides BACOVA_01626 and BACOVA_01627 overlap by 11 nucleotides BACOVA_01627 and BACOVA_01628 are separated by 10 nucleotides
BACOVA_01625: BACOVA_01625 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 130,566 to 131,741
_01625
BACOVA_01626: BACOVA_01626 - calcium-translocating P-type ATPase, PMCA-type, at 131,832 to 134,537
_01626
BACOVA_01627: BACOVA_01627 - HAD hydrolase, family IA, variant 3, at 134,527 to 135,150
_01627
BACOVA_01628: BACOVA_01628 - riboflavin biosynthesis protein RibF, at 135,161 to 136,108
_01628
Position (kb) 131
132
133
134
135 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 130.834 kb on + strand, within BACOVA_01625 at 130.835 kb on - strand, within BACOVA_01625 at 130.895 kb on + strand, within BACOVA_01625 at 130.904 kb on + strand, within BACOVA_01625 at 130.904 kb on + strand, within BACOVA_01625 at 130.904 kb on + strand, within BACOVA_01625 at 130.905 kb on - strand, within BACOVA_01625 at 130.944 kb on + strand, within BACOVA_01625 at 130.975 kb on + strand, within BACOVA_01625 at 131.023 kb on + strand, within BACOVA_01625 at 131.029 kb on + strand, within BACOVA_01625 at 131.117 kb on + strand, within BACOVA_01625 at 131.117 kb on + strand, within BACOVA_01625 at 131.117 kb on + strand, within BACOVA_01625 at 131.141 kb on - strand, within BACOVA_01625 at 131.141 kb on - strand, within BACOVA_01625 at 131.141 kb on - strand, within BACOVA_01625 at 131.153 kb on + strand, within BACOVA_01625 at 131.153 kb on + strand, within BACOVA_01625 at 131.154 kb on - strand, within BACOVA_01625 at 131.154 kb on - strand, within BACOVA_01625 at 131.237 kb on + strand, within BACOVA_01625 at 131.311 kb on + strand, within BACOVA_01625 at 131.354 kb on + strand, within BACOVA_01625 at 131.354 kb on + strand, within BACOVA_01625 at 131.366 kb on - strand, within BACOVA_01625 at 131.454 kb on - strand, within BACOVA_01625 at 131.466 kb on - strand, within BACOVA_01625 at 131.466 kb on - strand, within BACOVA_01625 at 131.471 kb on + strand, within BACOVA_01625 at 131.496 kb on - strand, within BACOVA_01625 at 131.517 kb on + strand, within BACOVA_01625 at 131.566 kb on + strand, within BACOVA_01625 at 131.591 kb on + strand, within BACOVA_01625 at 131.598 kb on - strand, within BACOVA_01625 at 131.626 kb on + strand at 131.636 kb on + strand at 131.637 kb on - strand at 131.729 kb on + strand at 131.756 kb on + strand at 131.797 kb on + strand at 131.815 kb on + strand at 134.504 kb on + strand at 134.504 kb on + strand at 134.504 kb on + strand at 134.573 kb on + strand at 134.577 kb on + strand at 134.577 kb on + strand at 134.621 kb on + strand, within BACOVA_01627 at 134.700 kb on + strand, within BACOVA_01627 at 134.796 kb on + strand, within BACOVA_01627 at 134.796 kb on + strand, within BACOVA_01627 at 134.796 kb on + strand, within BACOVA_01627 at 134.798 kb on + strand, within BACOVA_01627 at 134.922 kb on + strand, within BACOVA_01627 at 135.102 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pullulan 2.5 mg/mL (C) remove 130,834 + BACOVA_01625 0.23 +2.0 130,835 - BACOVA_01625 0.23 +1.3 130,895 + BACOVA_01625 0.28 +1.9 130,904 + BACOVA_01625 0.29 -1.3 130,904 + BACOVA_01625 0.29 -1.4 130,904 + BACOVA_01625 0.29 -0.6 130,905 - BACOVA_01625 0.29 -1.9 130,944 + BACOVA_01625 0.32 -0.4 130,975 + BACOVA_01625 0.35 +0.2 131,023 + BACOVA_01625 0.39 -2.6 131,029 + BACOVA_01625 0.39 +0.8 131,117 + BACOVA_01625 0.47 -0.1 131,117 + BACOVA_01625 0.47 -0.5 131,117 + BACOVA_01625 0.47 +0.3 131,141 - BACOVA_01625 0.49 +1.6 131,141 - BACOVA_01625 0.49 -0.5 131,141 - BACOVA_01625 0.49 +1.4 131,153 + BACOVA_01625 0.50 +1.5 131,153 + BACOVA_01625 0.50 -0.5 131,154 - BACOVA_01625 0.50 +0.2 131,154 - BACOVA_01625 0.50 +0.6 131,237 + BACOVA_01625 0.57 -0.1 131,311 + BACOVA_01625 0.63 +0.3 131,354 + BACOVA_01625 0.67 -0.8 131,354 + BACOVA_01625 0.67 -1.7 131,366 - BACOVA_01625 0.68 -0.8 131,454 - BACOVA_01625 0.76 -0.2 131,466 - BACOVA_01625 0.77 +0.4 131,466 - BACOVA_01625 0.77 -0.6 131,471 + BACOVA_01625 0.77 -1.1 131,496 - BACOVA_01625 0.79 -0.4 131,517 + BACOVA_01625 0.81 -3.3 131,566 + BACOVA_01625 0.85 +0.4 131,591 + BACOVA_01625 0.87 -1.0 131,598 - BACOVA_01625 0.88 +0.4 131,626 + +1.4 131,636 + -3.0 131,637 - -2.0 131,729 + +0.1 131,756 + -0.0 131,797 + -0.6 131,815 + +1.1 134,504 + +0.4 134,504 + +0.5 134,504 + +0.7 134,573 + -1.7 134,577 + -0.6 134,577 + +0.5 134,621 + BACOVA_01627 0.15 +0.0 134,700 + BACOVA_01627 0.28 -0.5 134,796 + BACOVA_01627 0.43 +1.9 134,796 + BACOVA_01627 0.43 +3.7 134,796 + BACOVA_01627 0.43 -1.1 134,798 + BACOVA_01627 0.43 +0.6 134,922 + BACOVA_01627 0.63 +0.1 135,102 + -1.8
Or see this region's nucleotide sequence