Experiment: Pullulan 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00843 and BACOVA_00844 overlap by 13 nucleotides BACOVA_00844 and BACOVA_00845 overlap by 20 nucleotides BACOVA_00845 and BACOVA_00846 are separated by 269 nucleotides
BACOVA_00843: BACOVA_00843 - hypothetical protein, at 100,433 to 102,145
_00843
BACOVA_00844: BACOVA_00844 - hypothetical protein, at 102,133 to 102,246
_00844
BACOVA_00845: BACOVA_00845 - putative DNA-binding protein, at 102,227 to 102,844
_00845
BACOVA_00846: BACOVA_00846 - hypothetical protein, at 103,114 to 105,360
_00846
Position (kb)
102
103 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 101.244 kb on + strand, within BACOVA_00843 at 101.248 kb on + strand, within BACOVA_00843 at 101.248 kb on + strand, within BACOVA_00843 at 101.248 kb on + strand, within BACOVA_00843 at 101.305 kb on - strand, within BACOVA_00843 at 101.305 kb on - strand, within BACOVA_00843 at 101.309 kb on - strand, within BACOVA_00843 at 101.309 kb on - strand, within BACOVA_00843 at 101.315 kb on + strand, within BACOVA_00843 at 101.316 kb on - strand, within BACOVA_00843 at 101.319 kb on - strand, within BACOVA_00843 at 101.319 kb on - strand, within BACOVA_00843 at 101.319 kb on - strand, within BACOVA_00843 at 101.358 kb on + strand, within BACOVA_00843 at 101.358 kb on + strand, within BACOVA_00843 at 101.362 kb on + strand, within BACOVA_00843 at 101.363 kb on - strand, within BACOVA_00843 at 101.378 kb on + strand, within BACOVA_00843 at 101.378 kb on + strand, within BACOVA_00843 at 101.379 kb on - strand, within BACOVA_00843 at 101.379 kb on - strand, within BACOVA_00843 at 101.383 kb on - strand, within BACOVA_00843 at 101.416 kb on + strand, within BACOVA_00843 at 101.416 kb on + strand, within BACOVA_00843 at 101.417 kb on - strand, within BACOVA_00843 at 101.444 kb on + strand, within BACOVA_00843 at 101.455 kb on + strand, within BACOVA_00843 at 101.456 kb on - strand, within BACOVA_00843 at 101.458 kb on + strand, within BACOVA_00843 at 101.458 kb on + strand, within BACOVA_00843 at 101.459 kb on - strand, within BACOVA_00843 at 101.459 kb on - strand, within BACOVA_00843 at 101.461 kb on - strand, within BACOVA_00843 at 101.461 kb on - strand, within BACOVA_00843 at 101.468 kb on - strand, within BACOVA_00843 at 101.476 kb on - strand, within BACOVA_00843 at 101.516 kb on - strand, within BACOVA_00843 at 101.525 kb on - strand, within BACOVA_00843 at 101.550 kb on - strand, within BACOVA_00843 at 101.563 kb on + strand, within BACOVA_00843 at 101.587 kb on + strand, within BACOVA_00843 at 101.599 kb on - strand, within BACOVA_00843 at 101.613 kb on + strand, within BACOVA_00843 at 101.641 kb on + strand, within BACOVA_00843 at 101.662 kb on + strand, within BACOVA_00843 at 101.662 kb on + strand, within BACOVA_00843 at 101.695 kb on - strand, within BACOVA_00843 at 101.695 kb on - strand, within BACOVA_00843 at 101.699 kb on - strand, within BACOVA_00843 at 101.720 kb on - strand, within BACOVA_00843 at 101.720 kb on - strand, within BACOVA_00843 at 101.771 kb on - strand, within BACOVA_00843 at 101.783 kb on + strand, within BACOVA_00843 at 101.783 kb on + strand, within BACOVA_00843 at 101.783 kb on + strand, within BACOVA_00843 at 101.784 kb on - strand, within BACOVA_00843 at 101.836 kb on + strand, within BACOVA_00843 at 101.837 kb on - strand, within BACOVA_00843 at 101.881 kb on + strand, within BACOVA_00843 at 101.882 kb on - strand, within BACOVA_00843 at 101.882 kb on - strand, within BACOVA_00843 at 101.967 kb on + strand, within BACOVA_00843 at 101.968 kb on - strand, within BACOVA_00843 at 101.970 kb on + strand, within BACOVA_00843 at 101.970 kb on + strand, within BACOVA_00843 at 101.984 kb on - strand at 102.037 kb on + strand at 102.038 kb on - strand at 102.053 kb on - strand at 102.053 kb on - strand at 102.057 kb on - strand at 102.058 kb on + strand at 102.058 kb on + strand at 102.058 kb on + strand at 102.058 kb on + strand at 102.060 kb on + strand at 102.060 kb on + strand at 102.061 kb on - strand at 102.061 kb on - strand at 102.070 kb on + strand at 102.070 kb on + strand at 102.071 kb on - strand at 102.075 kb on - strand at 102.134 kb on + strand at 102.136 kb on + strand at 102.136 kb on + strand at 102.136 kb on + strand at 102.136 kb on + strand at 102.137 kb on - strand at 102.137 kb on - strand at 102.137 kb on - strand at 102.151 kb on + strand, within BACOVA_00844 at 102.152 kb on - strand, within BACOVA_00844 at 102.163 kb on + strand, within BACOVA_00844 at 102.225 kb on + strand, within BACOVA_00844 at 102.225 kb on + strand, within BACOVA_00844 at 102.226 kb on - strand, within BACOVA_00844 at 102.228 kb on + strand at 102.228 kb on + strand at 102.228 kb on + strand at 102.229 kb on - strand at 102.229 kb on - strand at 102.229 kb on - strand at 102.247 kb on - strand at 102.302 kb on - strand, within BACOVA_00845 at 102.346 kb on + strand, within BACOVA_00845 at 102.347 kb on - strand, within BACOVA_00845 at 102.349 kb on + strand, within BACOVA_00845 at 102.352 kb on - strand, within BACOVA_00845 at 102.352 kb on - strand, within BACOVA_00845 at 102.352 kb on - strand, within BACOVA_00845 at 102.368 kb on - strand, within BACOVA_00845 at 102.395 kb on + strand, within BACOVA_00845 at 102.473 kb on + strand, within BACOVA_00845 at 102.474 kb on - strand, within BACOVA_00845 at 102.570 kb on - strand, within BACOVA_00845 at 102.581 kb on - strand, within BACOVA_00845 at 102.598 kb on + strand, within BACOVA_00845 at 102.629 kb on - strand, within BACOVA_00845 at 102.665 kb on + strand, within BACOVA_00845 at 102.666 kb on - strand, within BACOVA_00845 at 102.696 kb on + strand, within BACOVA_00845 at 102.823 kb on - strand at 102.823 kb on - strand at 102.844 kb on + strand at 102.845 kb on - strand at 102.845 kb on - strand at 102.849 kb on - strand at 102.850 kb on + strand at 102.851 kb on - strand at 102.861 kb on + strand at 102.861 kb on + strand at 102.862 kb on - strand at 102.874 kb on + strand at 102.875 kb on - strand at 102.875 kb on - strand at 102.887 kb on - strand at 102.893 kb on - strand at 102.896 kb on + strand at 103.033 kb on - strand at 103.033 kb on - strand at 103.045 kb on - strand at 103.054 kb on + strand at 103.060 kb on + strand at 103.130 kb on - strand at 103.134 kb on + strand at 103.135 kb on - strand at 103.170 kb on + strand at 103.171 kb on - strand at 103.171 kb on - strand at 103.172 kb on + strand at 103.172 kb on + strand at 103.172 kb on + strand at 103.172 kb on + strand at 103.173 kb on - strand at 103.174 kb on + strand at 103.174 kb on + strand at 103.175 kb on - strand at 103.175 kb on - strand at 103.194 kb on + strand at 103.235 kb on - strand at 103.278 kb on - strand at 103.297 kb on - strand at 103.407 kb on + strand, within BACOVA_00846 at 103.408 kb on - strand, within BACOVA_00846 at 103.411 kb on + strand, within BACOVA_00846 at 103.412 kb on - strand, within BACOVA_00846 at 103.440 kb on - strand, within BACOVA_00846 at 103.444 kb on + strand, within BACOVA_00846 at 103.444 kb on + strand, within BACOVA_00846 at 103.445 kb on - strand, within BACOVA_00846 at 103.475 kb on + strand, within BACOVA_00846 at 103.506 kb on + strand, within BACOVA_00846 at 103.516 kb on - strand, within BACOVA_00846 at 103.527 kb on + strand, within BACOVA_00846 at 103.530 kb on - strand, within BACOVA_00846 at 103.553 kb on + strand, within BACOVA_00846 at 103.554 kb on - strand, within BACOVA_00846 at 103.596 kb on + strand, within BACOVA_00846 at 103.609 kb on - strand, within BACOVA_00846 at 103.659 kb on - strand, within BACOVA_00846 at 103.767 kb on + strand, within BACOVA_00846 at 103.767 kb on + strand, within BACOVA_00846 at 103.767 kb on + strand, within BACOVA_00846
Per-strain Table
Position Strand Gene LocusTag Fraction Pullulan 2.5 mg/mL (C) remove 101,244 + BACOVA_00843 0.47 +1.6 101,248 + BACOVA_00843 0.48 +0.4 101,248 + BACOVA_00843 0.48 -0.8 101,248 + BACOVA_00843 0.48 -1.1 101,305 - BACOVA_00843 0.51 +1.4 101,305 - BACOVA_00843 0.51 +1.2 101,309 - BACOVA_00843 0.51 +1.7 101,309 - BACOVA_00843 0.51 -0.5 101,315 + BACOVA_00843 0.51 -2.0 101,316 - BACOVA_00843 0.52 -1.7 101,319 - BACOVA_00843 0.52 +1.1 101,319 - BACOVA_00843 0.52 +0.9 101,319 - BACOVA_00843 0.52 +0.5 101,358 + BACOVA_00843 0.54 -2.3 101,358 + BACOVA_00843 0.54 -0.9 101,362 + BACOVA_00843 0.54 -1.6 101,363 - BACOVA_00843 0.54 -0.8 101,378 + BACOVA_00843 0.55 +4.2 101,378 + BACOVA_00843 0.55 +0.2 101,379 - BACOVA_00843 0.55 +0.4 101,379 - BACOVA_00843 0.55 +1.0 101,383 - BACOVA_00843 0.55 +2.6 101,416 + BACOVA_00843 0.57 +0.1 101,416 + BACOVA_00843 0.57 -0.7 101,417 - BACOVA_00843 0.57 +0.5 101,444 + BACOVA_00843 0.59 -1.5 101,455 + BACOVA_00843 0.60 +2.7 101,456 - BACOVA_00843 0.60 -1.0 101,458 + BACOVA_00843 0.60 +0.1 101,458 + BACOVA_00843 0.60 -0.9 101,459 - BACOVA_00843 0.60 +3.3 101,459 - BACOVA_00843 0.60 +0.1 101,461 - BACOVA_00843 0.60 -2.5 101,461 - BACOVA_00843 0.60 +0.2 101,468 - BACOVA_00843 0.60 +1.6 101,476 - BACOVA_00843 0.61 -0.5 101,516 - BACOVA_00843 0.63 -1.5 101,525 - BACOVA_00843 0.64 +4.1 101,550 - BACOVA_00843 0.65 +0.0 101,563 + BACOVA_00843 0.66 -0.0 101,587 + BACOVA_00843 0.67 -2.3 101,599 - BACOVA_00843 0.68 +0.4 101,613 + BACOVA_00843 0.69 +0.7 101,641 + BACOVA_00843 0.71 -1.4 101,662 + BACOVA_00843 0.72 -2.5 101,662 + BACOVA_00843 0.72 -1.3 101,695 - BACOVA_00843 0.74 +1.2 101,695 - BACOVA_00843 0.74 -2.9 101,699 - BACOVA_00843 0.74 -0.9 101,720 - BACOVA_00843 0.75 +2.5 101,720 - BACOVA_00843 0.75 -1.9 101,771 - BACOVA_00843 0.78 -0.0 101,783 + BACOVA_00843 0.79 +0.7 101,783 + BACOVA_00843 0.79 -1.5 101,783 + BACOVA_00843 0.79 -1.5 101,784 - BACOVA_00843 0.79 +0.8 101,836 + BACOVA_00843 0.82 +0.2 101,837 - BACOVA_00843 0.82 +0.3 101,881 + BACOVA_00843 0.85 +0.7 101,882 - BACOVA_00843 0.85 +0.6 101,882 - BACOVA_00843 0.85 -1.1 101,967 + BACOVA_00843 0.90 -1.0 101,968 - BACOVA_00843 0.90 -2.3 101,970 + BACOVA_00843 0.90 -2.3 101,970 + BACOVA_00843 0.90 -0.1 101,984 - -1.6 102,037 + -1.0 102,038 - -0.6 102,053 - +1.6 102,053 - -2.5 102,057 - -1.6 102,058 + +1.0 102,058 + -1.3 102,058 + +1.2 102,058 + +0.6 102,060 + -0.8 102,060 + +0.0 102,061 - -1.0 102,061 - -1.0 102,070 + -1.3 102,070 + -0.5 102,071 - +3.3 102,075 - -1.0 102,134 + -0.5 102,136 + -1.8 102,136 + -2.5 102,136 + -0.4 102,136 + -0.1 102,137 - -0.1 102,137 - -0.5 102,137 - -1.2 102,151 + BACOVA_00844 0.16 -0.9 102,152 - BACOVA_00844 0.17 +3.6 102,163 + BACOVA_00844 0.26 -1.0 102,225 + BACOVA_00844 0.81 +0.4 102,225 + BACOVA_00844 0.81 -0.1 102,226 - BACOVA_00844 0.82 -1.0 102,228 + -3.2 102,228 + +0.9 102,228 + +4.1 102,229 - -1.2 102,229 - -2.1 102,229 - -1.8 102,247 - -0.2 102,302 - BACOVA_00845 0.12 -1.3 102,346 + BACOVA_00845 0.19 -1.1 102,347 - BACOVA_00845 0.19 -1.8 102,349 + BACOVA_00845 0.20 +0.1 102,352 - BACOVA_00845 0.20 -2.2 102,352 - BACOVA_00845 0.20 +1.6 102,352 - BACOVA_00845 0.20 -0.3 102,368 - BACOVA_00845 0.23 -0.3 102,395 + BACOVA_00845 0.27 -1.9 102,473 + BACOVA_00845 0.40 -0.1 102,474 - BACOVA_00845 0.40 +1.7 102,570 - BACOVA_00845 0.56 -0.8 102,581 - BACOVA_00845 0.57 -1.8 102,598 + BACOVA_00845 0.60 +0.1 102,629 - BACOVA_00845 0.65 +2.3 102,665 + BACOVA_00845 0.71 +0.7 102,666 - BACOVA_00845 0.71 -0.5 102,696 + BACOVA_00845 0.76 -4.6 102,823 - -2.2 102,823 - -0.2 102,844 + -0.8 102,845 - +0.2 102,845 - -0.5 102,849 - +0.5 102,850 + +0.1 102,851 - -0.0 102,861 + -0.1 102,861 + +1.5 102,862 - -1.0 102,874 + +0.0 102,875 - +0.5 102,875 - +1.1 102,887 - -1.3 102,893 - +0.7 102,896 + -0.3 103,033 - +1.1 103,033 - +0.9 103,045 - +1.7 103,054 + -0.8 103,060 + -0.6 103,130 - -0.1 103,134 + -0.9 103,135 - +3.8 103,170 + +0.5 103,171 - -0.5 103,171 - -1.9 103,172 + -1.1 103,172 + +0.7 103,172 + -1.7 103,172 + -0.9 103,173 - -1.3 103,174 + +1.2 103,174 + -1.0 103,175 - -0.1 103,175 - +0.1 103,194 + +0.8 103,235 - +0.9 103,278 - +0.5 103,297 - +2.0 103,407 + BACOVA_00846 0.13 -0.9 103,408 - BACOVA_00846 0.13 -1.2 103,411 + BACOVA_00846 0.13 +0.5 103,412 - BACOVA_00846 0.13 +0.8 103,440 - BACOVA_00846 0.15 +0.9 103,444 + BACOVA_00846 0.15 +0.9 103,444 + BACOVA_00846 0.15 +1.0 103,445 - BACOVA_00846 0.15 -0.9 103,475 + BACOVA_00846 0.16 -1.9 103,506 + BACOVA_00846 0.17 -0.7 103,516 - BACOVA_00846 0.18 +1.0 103,527 + BACOVA_00846 0.18 +3.8 103,530 - BACOVA_00846 0.19 -0.8 103,553 + BACOVA_00846 0.20 +1.0 103,554 - BACOVA_00846 0.20 +0.4 103,596 + BACOVA_00846 0.21 +2.2 103,609 - BACOVA_00846 0.22 -0.5 103,659 - BACOVA_00846 0.24 +0.1 103,767 + BACOVA_00846 0.29 -0.8 103,767 + BACOVA_00846 0.29 -0.2 103,767 + BACOVA_00846 0.29 +0.7
Or see this region's nucleotide sequence