Experiment: Pullulan 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00239 and BACOVA_00240 are separated by 83 nucleotides BACOVA_00240 and BACOVA_00241 are separated by 230 nucleotides BACOVA_00241 and BACOVA_00242 are separated by 8 nucleotides
BACOVA_00239: BACOVA_00239 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 11,464 to 15,468
_00239
BACOVA_00240: BACOVA_00240 - hypothetical protein, at 15,552 to 15,662
_00240
BACOVA_00241: BACOVA_00241 - hypothetical protein, at 15,893 to 16,042
_00241
BACOVA_00242: BACOVA_00242 - TonB-linked outer membrane protein, SusC/RagA family, at 16,051 to 19,170
_00242
Position (kb)
15
16 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 14.631 kb on + strand, within BACOVA_00239 at 14.635 kb on - strand, within BACOVA_00239 at 14.673 kb on + strand, within BACOVA_00239 at 14.692 kb on - strand, within BACOVA_00239 at 14.700 kb on + strand, within BACOVA_00239 at 14.704 kb on - strand, within BACOVA_00239 at 14.755 kb on - strand, within BACOVA_00239 at 14.756 kb on + strand, within BACOVA_00239 at 14.757 kb on - strand, within BACOVA_00239 at 14.832 kb on - strand, within BACOVA_00239 at 14.832 kb on - strand, within BACOVA_00239 at 14.832 kb on - strand, within BACOVA_00239 at 14.832 kb on - strand, within BACOVA_00239 at 14.855 kb on + strand, within BACOVA_00239 at 14.866 kb on - strand, within BACOVA_00239 at 14.866 kb on - strand, within BACOVA_00239 at 14.875 kb on - strand, within BACOVA_00239 at 14.881 kb on - strand, within BACOVA_00239 at 14.885 kb on + strand, within BACOVA_00239 at 14.940 kb on + strand, within BACOVA_00239 at 14.940 kb on + strand, within BACOVA_00239 at 14.940 kb on + strand, within BACOVA_00239 at 14.941 kb on - strand, within BACOVA_00239 at 14.941 kb on - strand, within BACOVA_00239 at 14.946 kb on + strand, within BACOVA_00239 at 14.953 kb on - strand, within BACOVA_00239 at 14.953 kb on - strand, within BACOVA_00239 at 14.958 kb on + strand, within BACOVA_00239 at 15.018 kb on + strand, within BACOVA_00239 at 15.048 kb on - strand, within BACOVA_00239 at 15.083 kb on - strand at 15.106 kb on + strand at 15.114 kb on + strand at 15.115 kb on - strand at 15.155 kb on + strand at 15.172 kb on - strand at 15.172 kb on - strand at 15.196 kb on - strand at 15.204 kb on + strand at 15.208 kb on - strand at 15.208 kb on - strand at 15.240 kb on + strand at 15.240 kb on + strand at 15.247 kb on - strand at 15.303 kb on - strand at 15.303 kb on - strand at 15.323 kb on + strand at 15.338 kb on - strand at 15.338 kb on - strand at 15.339 kb on + strand at 15.340 kb on - strand at 15.414 kb on + strand at 15.425 kb on - strand at 15.450 kb on - strand at 15.456 kb on + strand at 15.459 kb on - strand at 15.510 kb on + strand at 15.549 kb on - strand at 15.549 kb on - strand at 15.552 kb on - strand at 15.566 kb on + strand, within BACOVA_00240 at 15.575 kb on - strand, within BACOVA_00240 at 15.579 kb on - strand, within BACOVA_00240 at 15.581 kb on - strand, within BACOVA_00240 at 15.590 kb on + strand, within BACOVA_00240 at 15.617 kb on - strand, within BACOVA_00240 at 15.635 kb on - strand, within BACOVA_00240 at 15.659 kb on - strand at 15.661 kb on - strand at 15.684 kb on + strand at 15.684 kb on + strand at 15.684 kb on + strand at 15.685 kb on - strand at 15.685 kb on - strand at 15.710 kb on + strand at 15.716 kb on + strand at 15.717 kb on - strand at 15.736 kb on + strand at 15.736 kb on + strand at 15.744 kb on + strand at 15.744 kb on + strand at 15.745 kb on - strand at 15.748 kb on - strand at 15.750 kb on - strand at 15.772 kb on + strand at 15.806 kb on + strand at 15.806 kb on + strand at 15.806 kb on + strand at 15.806 kb on + strand at 15.807 kb on - strand at 15.807 kb on - strand at 15.807 kb on - strand at 15.822 kb on + strand at 15.833 kb on + strand at 15.865 kb on - strand at 15.889 kb on - strand at 15.920 kb on - strand, within BACOVA_00241 at 15.933 kb on - strand, within BACOVA_00241 at 15.933 kb on - strand, within BACOVA_00241 at 15.955 kb on - strand, within BACOVA_00241 at 15.970 kb on - strand, within BACOVA_00241 at 15.991 kb on + strand, within BACOVA_00241 at 15.992 kb on - strand, within BACOVA_00241 at 16.009 kb on - strand, within BACOVA_00241 at 16.030 kb on - strand at 16.036 kb on - strand at 16.057 kb on + strand at 16.058 kb on - strand at 16.068 kb on + strand at 16.104 kb on + strand at 16.109 kb on + strand at 16.109 kb on + strand at 16.110 kb on - strand at 16.119 kb on - strand at 16.119 kb on - strand at 16.130 kb on + strand at 16.130 kb on + strand at 16.130 kb on + strand at 16.131 kb on - strand at 16.131 kb on - strand at 16.131 kb on - strand at 16.135 kb on - strand at 16.243 kb on - strand at 16.258 kb on - strand at 16.308 kb on + strand at 16.329 kb on - strand at 16.338 kb on - strand at 16.349 kb on + strand at 16.350 kb on - strand at 16.353 kb on + strand at 16.359 kb on + strand at 16.359 kb on + strand at 16.409 kb on + strand, within BACOVA_00242 at 16.450 kb on - strand, within BACOVA_00242 at 16.544 kb on - strand, within BACOVA_00242 at 16.545 kb on + strand, within BACOVA_00242 at 16.546 kb on - strand, within BACOVA_00242 at 16.614 kb on + strand, within BACOVA_00242 at 16.615 kb on - strand, within BACOVA_00242 at 16.635 kb on - strand, within BACOVA_00242
Per-strain Table
Position Strand Gene LocusTag Fraction Pullulan 2.5 mg/mL (C) remove 14,631 + BACOVA_00239 0.79 -0.1 14,635 - BACOVA_00239 0.79 -0.0 14,673 + BACOVA_00239 0.80 -1.5 14,692 - BACOVA_00239 0.81 -1.2 14,700 + BACOVA_00239 0.81 -0.2 14,704 - BACOVA_00239 0.81 -0.0 14,755 - BACOVA_00239 0.82 -0.6 14,756 + BACOVA_00239 0.82 -3.3 14,757 - BACOVA_00239 0.82 +0.7 14,832 - BACOVA_00239 0.84 -0.3 14,832 - BACOVA_00239 0.84 -0.5 14,832 - BACOVA_00239 0.84 +0.1 14,832 - BACOVA_00239 0.84 +1.0 14,855 + BACOVA_00239 0.85 -1.0 14,866 - BACOVA_00239 0.85 -1.0 14,866 - BACOVA_00239 0.85 -1.4 14,875 - BACOVA_00239 0.85 -2.5 14,881 - BACOVA_00239 0.85 +1.0 14,885 + BACOVA_00239 0.85 +2.4 14,940 + BACOVA_00239 0.87 +1.9 14,940 + BACOVA_00239 0.87 +2.7 14,940 + BACOVA_00239 0.87 +0.9 14,941 - BACOVA_00239 0.87 -0.9 14,941 - BACOVA_00239 0.87 +1.1 14,946 + BACOVA_00239 0.87 -1.4 14,953 - BACOVA_00239 0.87 -1.9 14,953 - BACOVA_00239 0.87 -0.3 14,958 + BACOVA_00239 0.87 +1.5 15,018 + BACOVA_00239 0.89 +1.6 15,048 - BACOVA_00239 0.89 -2.0 15,083 - -2.5 15,106 + -1.0 15,114 + +1.7 15,115 - -1.3 15,155 + +3.2 15,172 - -2.8 15,172 - +0.3 15,196 - -1.3 15,204 + -2.6 15,208 - -0.3 15,208 - -1.1 15,240 + +1.3 15,240 + +1.1 15,247 - -0.6 15,303 - -0.3 15,303 - -1.8 15,323 + -1.3 15,338 - -1.4 15,338 - -0.9 15,339 + -1.3 15,340 - -0.3 15,414 + -0.5 15,425 - +0.0 15,450 - -0.6 15,456 + +1.6 15,459 - +0.9 15,510 + +0.5 15,549 - -1.7 15,549 - -1.5 15,552 - +1.2 15,566 + BACOVA_00240 0.13 -1.2 15,575 - BACOVA_00240 0.21 -1.3 15,579 - BACOVA_00240 0.24 -0.8 15,581 - BACOVA_00240 0.26 -0.7 15,590 + BACOVA_00240 0.34 +0.5 15,617 - BACOVA_00240 0.59 +0.8 15,635 - BACOVA_00240 0.75 +0.3 15,659 - -0.1 15,661 - +1.2 15,684 + +2.3 15,684 + +1.8 15,684 + -0.3 15,685 - -0.9 15,685 - +0.3 15,710 + -1.2 15,716 + -0.5 15,717 - -1.4 15,736 + +0.9 15,736 + -0.3 15,744 + -0.4 15,744 + +0.7 15,745 - -1.1 15,748 - -2.5 15,750 - +3.4 15,772 + -0.5 15,806 + +2.1 15,806 + +0.7 15,806 + -0.6 15,806 + +1.6 15,807 - -0.3 15,807 - -1.2 15,807 - -1.7 15,822 + -0.5 15,833 + -0.1 15,865 - +0.4 15,889 - +2.3 15,920 - BACOVA_00241 0.18 +0.4 15,933 - BACOVA_00241 0.27 +3.4 15,933 - BACOVA_00241 0.27 +0.6 15,955 - BACOVA_00241 0.41 -2.1 15,970 - BACOVA_00241 0.51 +0.5 15,991 + BACOVA_00241 0.65 -2.0 15,992 - BACOVA_00241 0.66 +0.7 16,009 - BACOVA_00241 0.77 -0.3 16,030 - -2.1 16,036 - -0.3 16,057 + +0.5 16,058 - +0.1 16,068 + -0.6 16,104 + +1.2 16,109 + +0.1 16,109 + -0.8 16,110 - +0.2 16,119 - -0.5 16,119 - +0.5 16,130 + +0.6 16,130 + -2.0 16,130 + +1.3 16,131 - +0.5 16,131 - +2.0 16,131 - -3.2 16,135 - +2.0 16,243 - +0.5 16,258 - -0.6 16,308 + -1.3 16,329 - +0.4 16,338 - +0.6 16,349 + +1.5 16,350 - -0.3 16,353 + +0.9 16,359 + -0.7 16,359 + -1.9 16,409 + BACOVA_00242 0.11 -1.5 16,450 - BACOVA_00242 0.13 -0.8 16,544 - BACOVA_00242 0.16 -0.7 16,545 + BACOVA_00242 0.16 -1.0 16,546 - BACOVA_00242 0.16 -1.1 16,614 + BACOVA_00242 0.18 -0.8 16,615 - BACOVA_00242 0.18 -1.0 16,635 - BACOVA_00242 0.19 -0.5
Or see this region's nucleotide sequence