Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00349

Experiment: Xylan from corn core 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from corn core 2.5 mg/mL (C)
28,971	-		BACOVA_00345	0.79	+0.6
28,971	-		BACOVA_00345	0.79	-0.8
28,986	+		BACOVA_00345	0.80	-0.3
29,005	+		BACOVA_00345	0.82	+0.1
29,005	+		BACOVA_00345	0.82	+0.5
29,009	+		BACOVA_00345	0.82	+0.4
29,010	-		BACOVA_00345	0.82	+0.0
29,010	-		BACOVA_00345	0.82	-0.3
29,010	-		BACOVA_00345	0.82	-1.2
29,025	-		BACOVA_00345	0.84	-0.2
29,025	-		BACOVA_00345	0.84	-0.2
29,044	+		BACOVA_00345	0.85	+0.5
29,115	-				+0.4
29,193	+				-1.2
29,193	+				+0.2
29,194	-				-0.4
29,197	-				+0.0
29,216	+				-0.1
29,217	-				-0.5
29,225	-				-1.6
29,302	+				-0.3
29,347	+				-0.4
29,350	+				-0.1
29,351	-				+0.3
29,351	-				-0.0
29,386	-		BACOVA_00346	0.30	+0.1
29,397	+		BACOVA_00346	0.40	-0.8
29,397	+		BACOVA_00346	0.40	+0.2
29,425	-		BACOVA_00346	0.65	+0.2
29,439	+		BACOVA_00346	0.77	+0.4
29,454	+				-0.7
29,454	+				+0.1
29,454	+				+0.2
29,454	+				+0.9
29,461	+				+0.1
29,462	-				-0.6
29,476	+				-0.2
29,476	+				-0.1
29,477	-				+1.0
29,500	+				+0.4
29,500	+				+0.3
29,508	-		BACOVA_00347	0.15	+0.4
29,530	-		BACOVA_00347	0.31	+0.2
29,577	+		BACOVA_00347	0.66	+1.1
29,628	+				+0.3
29,628	+				+2.9
29,628	+				-0.8
29,628	+				-0.2
29,628	+				+0.8
29,629	-				-0.8
29,629	-				+0.5
29,629	-				-0.3
29,660	+				-0.9
29,660	+				+0.2
29,674	+				-0.9
29,704	+				-0.5
29,730	+		BACOVA_00348	0.17	+0.5
29,738	+		BACOVA_00348	0.22	-1.1
29,738	+		BACOVA_00348	0.22	+1.7
29,755	-		BACOVA_00348	0.32	-0.4
29,755	-		BACOVA_00348	0.32	+0.1
29,768	+		BACOVA_00348	0.40	+0.0
29,772	+		BACOVA_00348	0.43	+1.1
29,772	+		BACOVA_00348	0.43	+0.8
29,773	-		BACOVA_00348	0.43	+0.2
29,774	+		BACOVA_00348	0.44	-0.2
29,790	-		BACOVA_00348	0.54	+0.2
29,790	-		BACOVA_00348	0.54	-0.2
29,805	-		BACOVA_00348	0.63	+0.5
29,901	-				-2.4
29,947	+				-0.2
29,947	+				+0.7
29,948	-				-0.4
29,951	+				-0.5
29,951	+				-0.4
29,951	+				+0.2
29,956	+				-0.1
29,959	-				+0.4
30,047	-				-0.3
30,067	-				+0.4
30,103	+				+0.3
30,144	-				+0.2
30,144	-				-0.0
30,144	-				-2.2
30,191	+		BACOVA_00349	0.11	+0.1
30,245	+		BACOVA_00349	0.13	-0.5
30,246	-		BACOVA_00349	0.13	-0.7
30,345	-		BACOVA_00349	0.17	+0.4
30,392	+		BACOVA_00349	0.19	+0.0
30,392	+		BACOVA_00349	0.19	-0.4
30,393	-		BACOVA_00349	0.19	-0.3
30,394	+		BACOVA_00349	0.19	+1.0
30,395	-		BACOVA_00349	0.20	+0.1
30,410	-		BACOVA_00349	0.20	+0.1
30,410	-		BACOVA_00349	0.20	-0.2
30,410	-		BACOVA_00349	0.20	+0.5
30,426	+		BACOVA_00349	0.21	-0.3
30,426	+		BACOVA_00349	0.21	-0.2
30,426	+		BACOVA_00349	0.21	-0.1
30,427	-		BACOVA_00349	0.21	+0.4
30,427	-		BACOVA_00349	0.21	-0.3
30,438	-		BACOVA_00349	0.21	-1.0
30,469	+		BACOVA_00349	0.23	-0.1
30,529	-		BACOVA_00349	0.25	-0.0
30,533	+		BACOVA_00349	0.25	-0.9
30,533	+		BACOVA_00349	0.25	-0.6
30,534	-		BACOVA_00349	0.25	-0.0
30,540	-		BACOVA_00349	0.26	-1.3
30,540	-		BACOVA_00349	0.26	+0.3
30,548	-		BACOVA_00349	0.26	-0.8
30,577	-		BACOVA_00349	0.27	+0.2
30,606	+		BACOVA_00349	0.29	-0.7
30,611	+		BACOVA_00349	0.29	+0.2
30,611	+		BACOVA_00349	0.29	-0.2
30,611	+		BACOVA_00349	0.29	-0.0
30,626	+		BACOVA_00349	0.29	+0.6
30,627	-		BACOVA_00349	0.29	+1.7
30,627	-		BACOVA_00349	0.29	-1.2
30,627	-		BACOVA_00349	0.29	-0.8
30,647	-		BACOVA_00349	0.30	-0.3
30,659	-		BACOVA_00349	0.31	-0.3
30,662	+		BACOVA_00349	0.31	+0.7
30,662	+		BACOVA_00349	0.31	-0.0
30,662	+		BACOVA_00349	0.31	-0.8
30,663	-		BACOVA_00349	0.31	-0.1
30,663	-		BACOVA_00349	0.31	-0.4
30,663	-		BACOVA_00349	0.31	-0.2
30,745	+		BACOVA_00349	0.34	-0.2
30,766	-		BACOVA_00349	0.35	-1.0
30,783	+		BACOVA_00349	0.36	-1.2
30,787	+		BACOVA_00349	0.36	-2.1
30,787	+		BACOVA_00349	0.36	+0.7
30,787	+		BACOVA_00349	0.36	-0.6
30,787	+		BACOVA_00349	0.36	+0.3
30,787	+		BACOVA_00349	0.36	+0.2
30,787	+		BACOVA_00349	0.36	+0.4
30,787	+		BACOVA_00349	0.36	+0.5
30,787	+		BACOVA_00349	0.36	-0.5
30,788	-		BACOVA_00349	0.36	+1.6
30,788	-		BACOVA_00349	0.36	-0.1
30,788	-		BACOVA_00349	0.36	-0.5
30,788	-		BACOVA_00349	0.36	-0.6
30,788	-		BACOVA_00349	0.36	+0.3
30,806	+		BACOVA_00349	0.37	-0.2
30,878	-		BACOVA_00349	0.40	-0.0
30,904	-		BACOVA_00349	0.41	-0.9
30,947	+		BACOVA_00349	0.43	+0.4
30,965	+		BACOVA_00349	0.44	-0.0
31,045	+		BACOVA_00349	0.47	-0.1
31,052	+		BACOVA_00349	0.48	-0.2
31,053	-		BACOVA_00349	0.48	+0.1
31,058	+		BACOVA_00349	0.48	-0.9
31,059	-		BACOVA_00349	0.48	+0.1
31,059	-		BACOVA_00349	0.48	-1.1
31,059	-		BACOVA_00349	0.48	-0.7
31,153	+		BACOVA_00349	0.52	-0.9
31,194	-		BACOVA_00349	0.54	+0.3
31,206	+		BACOVA_00349	0.54	-0.3
31,206	+		BACOVA_00349	0.54	+0.9
31,207	-		BACOVA_00349	0.54	+0.0
31,209	-		BACOVA_00349	0.54	-1.4
31,242	-		BACOVA_00349	0.56	-1.2
31,272	+		BACOVA_00349	0.57	+1.0
31,273	-		BACOVA_00349	0.57	+0.2
31,274	+		BACOVA_00349	0.57	-1.3
31,274	+		BACOVA_00349	0.57	+1.4
31,276	+		BACOVA_00349	0.57	-0.3
31,277	-		BACOVA_00349	0.57	-0.4
31,307	-		BACOVA_00349	0.58	+1.1
31,309	+		BACOVA_00349	0.58	-0.3
31,310	-		BACOVA_00349	0.59	+1.0
31,320	+		BACOVA_00349	0.59	-0.9
31,320	+		BACOVA_00349	0.59	+0.3
31,321	-		BACOVA_00349	0.59	+0.2
31,342	+		BACOVA_00349	0.60	-0.7
31,344	+		BACOVA_00349	0.60	-0.8
31,344	+		BACOVA_00349	0.60	+0.2
31,344	+		BACOVA_00349	0.60	-0.2
31,345	-		BACOVA_00349	0.60	-1.3
31,350	+		BACOVA_00349	0.60	-0.4
31,351	-		BACOVA_00349	0.60	-0.3
31,351	-		BACOVA_00349	0.60	+0.6
31,400	+		BACOVA_00349	0.62	+0.7
31,401	-		BACOVA_00349	0.62	+0.3
31,401	-		BACOVA_00349	0.62	-0.5
31,402	+		BACOVA_00349	0.62	-0.5
31,404	+		BACOVA_00349	0.63	-0.2
31,404	+		BACOVA_00349	0.63	-0.2
31,404	+		BACOVA_00349	0.63	-0.4
31,404	+		BACOVA_00349	0.63	+0.4
31,404	+		BACOVA_00349	0.63	-0.7
31,405	-		BACOVA_00349	0.63	-0.2
31,405	-		BACOVA_00349	0.63	+0.6
31,406	+		BACOVA_00349	0.63	-0.0
31,407	-		BACOVA_00349	0.63	-0.6
31,407	-		BACOVA_00349	0.63	-0.9
31,415	-		BACOVA_00349	0.63	-0.1
31,522	-		BACOVA_00349	0.68	-0.3
31,524	-		BACOVA_00349	0.68	-0.3
31,524	-		BACOVA_00349	0.68	+1.1
31,539	-		BACOVA_00349	0.68	+0.3
31,594	+		BACOVA_00349	0.71	-0.0
31,605	+		BACOVA_00349	0.71	+1.0
31,606	-		BACOVA_00349	0.71	-0.3
31,606	-		BACOVA_00349	0.71	+0.1
31,606	-		BACOVA_00349	0.71	-0.9
31,609	-		BACOVA_00349	0.71	-0.4
31,617	-		BACOVA_00349	0.72	+0.8
31,649	+		BACOVA_00349	0.73	-0.1
31,749	+		BACOVA_00349	0.77	+0.2
31,752	-		BACOVA_00349	0.77	-0.3
31,752	-		BACOVA_00349	0.77	+0.5
31,756	+		BACOVA_00349	0.78	-0.2
31,756	+		BACOVA_00349	0.78	-0.5
31,756	+		BACOVA_00349	0.78	-0.6
31,757	-		BACOVA_00349	0.78	+0.0
31,773	-		BACOVA_00349	0.78	+0.3
31,780	+		BACOVA_00349	0.79	-2.0
31,781	-		BACOVA_00349	0.79	+0.3
31,782	+		BACOVA_00349	0.79	+0.3
31,782	+		BACOVA_00349	0.79	-0.2
31,783	-		BACOVA_00349	0.79	-0.2
31,783	-		BACOVA_00349	0.79	-0.1
31,790	-		BACOVA_00349	0.79	-0.3
31,790	-		BACOVA_00349	0.79	+0.3
31,793	+		BACOVA_00349	0.79	+0.3
31,794	-		BACOVA_00349	0.79	+0.3
31,794	-		BACOVA_00349	0.79	-0.8
31,794	-		BACOVA_00349	0.79	-0.4
31,795	+		BACOVA_00349	0.79	+0.3
31,796	-		BACOVA_00349	0.79	-0.3
31,867	+		BACOVA_00349	0.82	-1.0
31,867	+		BACOVA_00349	0.82	-0.0
31,874	+		BACOVA_00349	0.83	+0.3
31,874	+		BACOVA_00349	0.83	-0.2
31,876	+		BACOVA_00349	0.83	+0.9
31,877	-		BACOVA_00349	0.83	+0.0
31,881	+		BACOVA_00349	0.83	-0.1
31,882	-		BACOVA_00349	0.83	-0.7
31,882	-		BACOVA_00349	0.83	-0.1
31,897	-		BACOVA_00349	0.84	+0.3
31,899	+		BACOVA_00349	0.84	+1.1
31,900	-		BACOVA_00349	0.84	-0.8
31,904	-		BACOVA_00349	0.84	+0.4
31,906	-		BACOVA_00349	0.84	+0.1
31,931	+		BACOVA_00349	0.85	-0.9
31,936	-		BACOVA_00349	0.85	-0.8
31,943	+		BACOVA_00349	0.86	+1.2
31,975	+		BACOVA_00349	0.87	+0.4
31,976	-		BACOVA_00349	0.87	+0.3
31,976	-		BACOVA_00349	0.87	+0.6
32,040	-		BACOVA_00349	0.90	+0.7
32,141	-				-0.2
32,165	+				+0.1
32,185	+				-0.0
32,185	+				+0.0
32,210	-				+0.2
32,210	-				-0.2
32,216	-				+0.6
32,216	-				-0.6
32,248	+				-0.8
32,249	-				-1.0
32,281	-				+0.1
32,293	-				-0.3
32,296	+				-0.5
32,300	-				-0.0
32,302	-				+0.2
32,324	+				-0.3
32,341	-				+0.4
32,341	-				+0.5
32,341	-				-0.0
32,347	+				+0.3
32,347	+				+0.5
32,348	-				+0.7
32,374	+				-1.0
32,410	-				-0.0