Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01059

Experiment: T3 MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	T3 MOI10
1,091,277	+		OHPLBJKB_01057	0.74	+0.4
1,091,290	-		OHPLBJKB_01057	0.75	+0.2
1,091,332	-		OHPLBJKB_01057	0.77	-1.0
1,091,478	+		OHPLBJKB_01057	0.83	-1.0
1,091,499	+		OHPLBJKB_01057	0.84	+0.8
1,091,499	+		OHPLBJKB_01057	0.84	+0.8
1,091,499	+		OHPLBJKB_01057	0.84	+1.4
1,091,499	+		OHPLBJKB_01057	0.84	-0.8
1,091,499	+		OHPLBJKB_01057	0.84	-0.0
1,091,499	+		OHPLBJKB_01057	0.84	+0.9
1,091,499	+		OHPLBJKB_01057	0.84	+0.9
1,091,499	+		OHPLBJKB_01057	0.84	-0.6
1,091,500	-		OHPLBJKB_01057	0.84	+0.3
1,091,500	-		OHPLBJKB_01057	0.84	-1.2
1,091,500	-		OHPLBJKB_01057	0.84	-0.8
1,091,500	-		OHPLBJKB_01057	0.84	+0.1
1,091,500	-		OHPLBJKB_01057	0.84	+0.4
1,091,500	-		OHPLBJKB_01057	0.84	+0.3
1,091,500	-		OHPLBJKB_01057	0.84	+0.9
1,091,500	-		OHPLBJKB_01057	0.84	+0.6
1,091,500	-		OHPLBJKB_01057	0.84	-0.4
1,091,501	+		OHPLBJKB_01057	0.84	+1.0
1,091,501	+		OHPLBJKB_01057	0.84	-1.4
1,091,502	-		OHPLBJKB_01057	0.84	+0.8
1,091,502	-		OHPLBJKB_01057	0.84	-0.6
1,091,502	-		OHPLBJKB_01057	0.84	-0.1
1,091,502	-		OHPLBJKB_01057	0.84	-1.0
1,091,577	+		OHPLBJKB_01057	0.88	+2.1
1,091,605	-		OHPLBJKB_01057	0.89	-0.6
1,091,621	+				-0.3
1,091,621	+				-0.7
1,091,622	-				+0.2
1,091,622	-				+1.0
1,091,622	-				+0.8
1,091,622	-				-0.1
1,091,622	-				-0.5
1,091,622	-				-0.7
1,091,624	+				-0.8
1,091,624	+				-1.0
1,091,624	+				-0.1
1,091,625	-				-1.0
1,091,625	-				-0.2
1,091,625	-				-0.3
1,091,625	-				+0.3
1,091,789	+				-0.8
1,091,951	-		OHPLBJKB_01058	0.35	+0.7
1,091,951	-		OHPLBJKB_01058	0.35	+0.6
1,092,033	+		OHPLBJKB_01058	0.55	+0.3
1,092,033	+		OHPLBJKB_01058	0.55	-0.5
1,092,034	-		OHPLBJKB_01058	0.55	-0.5
1,092,094	+		OHPLBJKB_01058	0.70	+0.1
1,092,094	+		OHPLBJKB_01058	0.70	+1.0
1,092,094	+		OHPLBJKB_01058	0.70	+1.4
1,092,094	+		OHPLBJKB_01058	0.70	+0.9
1,092,094	+		OHPLBJKB_01058	0.70	+0.2
1,092,095	-		OHPLBJKB_01058	0.70	+0.5
1,092,095	-		OHPLBJKB_01058	0.70	-1.5
1,092,095	-		OHPLBJKB_01058	0.70	-0.0
1,092,095	-		OHPLBJKB_01058	0.70	-0.5
1,092,095	-		OHPLBJKB_01058	0.70	+0.9
1,092,095	-		OHPLBJKB_01058	0.70	-0.6
1,092,095	-		OHPLBJKB_01058	0.70	-0.4
1,092,095	-		OHPLBJKB_01058	0.70	-0.8
1,092,105	+		OHPLBJKB_01058	0.72	+0.1
1,092,105	+		OHPLBJKB_01058	0.72	-0.0
1,092,156	+		OHPLBJKB_01058	0.85	+0.8
1,092,157	-		OHPLBJKB_01058	0.85	+0.9
1,092,168	-		OHPLBJKB_01058	0.88	-0.2
1,092,202	+				+2.5
1,092,202	+				-0.7
1,092,202	+				-0.4
1,092,202	+				-1.5
1,092,202	+				-0.8
1,092,202	+				+0.3
1,092,203	-				-0.9
1,092,203	-				-0.1
1,092,284	-		OHPLBJKB_01059	0.28	-0.5
1,092,367	+		OHPLBJKB_01059	0.62	-0.2
1,092,368	-		OHPLBJKB_01059	0.62	-0.5
1,092,448	+				-1.6
1,092,448	+				-0.6
1,092,502	-				+0.0
1,092,538	+				-1.1
1,092,538	+				+0.4
1,092,688	+				+0.4
1,092,688	+				+1.5
1,092,689	-				-0.5
1,092,692	+				+1.3
1,092,692	+				-1.0
1,092,696	-				+0.6
1,092,709	+				+0.3
1,092,710	-				-0.7
1,092,710	-				+1.2
1,092,726	+				+0.8
1,092,727	-				-0.4
1,092,746	+		OHPLBJKB_01060	0.12	-0.6
1,092,746	+		OHPLBJKB_01060	0.12	-0.4
1,092,747	-		OHPLBJKB_01060	0.12	+0.1
1,092,747	-		OHPLBJKB_01060	0.12	+0.6
1,092,747	-		OHPLBJKB_01060	0.12	+0.3
1,092,773	+		OHPLBJKB_01060	0.20	+1.1
1,092,845	+		OHPLBJKB_01060	0.42	+0.1
1,092,845	+		OHPLBJKB_01060	0.42	+1.5
1,092,893	+		OHPLBJKB_01060	0.56	+1.0
1,092,894	-		OHPLBJKB_01060	0.56	+0.5
1,092,966	+		OHPLBJKB_01060	0.78	+0.2
1,092,966	+		OHPLBJKB_01060	0.78	-0.7
1,092,966	+		OHPLBJKB_01060	0.78	-0.7
1,092,967	-		OHPLBJKB_01060	0.78	-0.2
1,093,037	+				-0.1
1,093,037	+				-0.3
1,093,037	+				+0.3
1,093,037	+				+0.1
1,093,037	+				+0.5
1,093,037	+				-0.4
1,093,037	+				-0.4
1,093,038	-				-0.7
1,093,038	-				-1.7
1,093,038	-				-0.1
1,093,038	-				-0.3
1,093,038	-				-0.7
1,093,038	-				+0.6
1,093,038	-				+0.5
1,093,038	-				+0.3
1,093,038	-				+0.2
1,093,074	+				+0.9
1,093,074	+				-0.5
1,093,075	-				-0.4
1,093,151	+				+0.2
1,093,151	+				+1.0
1,093,151	+				+1.2
1,093,152	-				+1.5
1,093,152	-				-0.3
1,093,152	-				-1.2
1,093,156	+				-0.0
1,093,157	-				-0.1
1,093,157	-				-0.4
1,093,171	+				+0.3
1,093,171	+				-0.2
1,093,172	-				-0.0
1,093,174	+				-0.2
1,093,175	-				-1.0
1,093,188	+				+0.1
1,093,188	+				+0.4
1,093,188	+				+0.4
1,093,188	+				-0.6
1,093,189	-				-1.1
1,093,189	-				+0.9
1,093,189	-				-1.0
1,093,192	+				+0.2
1,093,192	+				-0.0
1,093,192	+				-0.8
1,093,192	+				-0.2
1,093,192	+				-0.2
1,093,192	+				-2.3
1,093,193	-				+0.3
1,093,193	-				+0.3
1,093,193	-				+1.4
1,093,193	-				-0.8
1,093,193	-				+0.8
1,093,193	-				+1.2
1,093,193	-				+1.5
1,093,193	-				-1.0
1,093,193	-				-0.9
1,093,197	-				-0.9
1,093,197	-				-0.3
1,093,197	-				-0.3
1,093,239	+		OHPLBJKB_01061	0.14	-0.4
1,093,240	-		OHPLBJKB_01061	0.15	+0.3
1,093,240	-		OHPLBJKB_01061	0.15	-0.2
1,093,267	+		OHPLBJKB_01061	0.23	+0.2
1,093,268	-		OHPLBJKB_01061	0.23	-0.0
1,093,268	-		OHPLBJKB_01061	0.23	+1.6
1,093,291	+		OHPLBJKB_01061	0.30	-0.5
1,093,291	+		OHPLBJKB_01061	0.30	-0.4
1,093,291	+		OHPLBJKB_01061	0.30	-0.6
1,093,291	+		OHPLBJKB_01061	0.30	-0.0
1,093,292	-		OHPLBJKB_01061	0.30	-0.2
1,093,292	-		OHPLBJKB_01061	0.30	+0.0
1,093,292	-		OHPLBJKB_01061	0.30	+0.8
1,093,297	+		OHPLBJKB_01061	0.31	-0.4
1,093,297	+		OHPLBJKB_01061	0.31	-0.8
1,093,297	+		OHPLBJKB_01061	0.31	-0.2
1,093,297	+		OHPLBJKB_01061	0.31	-0.6
1,093,297	+		OHPLBJKB_01061	0.31	-0.3
1,093,297	+		OHPLBJKB_01061	0.31	-0.1
1,093,297	+		OHPLBJKB_01061	0.31	-0.2
1,093,298	-		OHPLBJKB_01061	0.32	-0.7
1,093,298	-		OHPLBJKB_01061	0.32	+0.9
1,093,298	-		OHPLBJKB_01061	0.32	-0.7
1,093,298	-		OHPLBJKB_01061	0.32	-0.9
1,093,298	-		OHPLBJKB_01061	0.32	-0.3
1,093,298	-		OHPLBJKB_01061	0.32	+1.2
1,093,298	-		OHPLBJKB_01061	0.32	+0.9
1,093,303	-		OHPLBJKB_01061	0.33	+0.9
1,093,327	-		OHPLBJKB_01061	0.40	+0.3
1,093,338	-		OHPLBJKB_01061	0.43	-0.2
1,093,338	-		OHPLBJKB_01061	0.43	+1.3
1,093,338	-		OHPLBJKB_01061	0.43	+0.3
1,093,353	-		OHPLBJKB_01061	0.48	+0.8
1,093,353	-		OHPLBJKB_01061	0.48	-1.0
1,093,353	-		OHPLBJKB_01061	0.48	-0.2
1,093,353	-		OHPLBJKB_01061	0.48	-1.4
1,093,395	+		OHPLBJKB_01061	0.60	+1.0
1,093,396	-		OHPLBJKB_01061	0.60	-0.2
1,093,411	+		OHPLBJKB_01061	0.64	-0.2
1,093,412	-		OHPLBJKB_01061	0.65	-0.6
1,093,429	+		OHPLBJKB_01061	0.70	-0.1
1,093,433	+		OHPLBJKB_01061	0.71	-0.3
1,093,433	+		OHPLBJKB_01061	0.71	-1.1
1,093,433	+		OHPLBJKB_01061	0.71	-0.4