Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03604

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,032,571	+		MPMX19_03603	0.29	+1.5
1,032,571	+		MPMX19_03603	0.29	-0.8
1,032,571	+		MPMX19_03603	0.29	+0.8
1,032,571	+		MPMX19_03603	0.29	+0.1
1,032,572	-		MPMX19_03603	0.29	+1.1
1,032,657	+		MPMX19_03603	0.38	+0.7
1,032,657	+		MPMX19_03603	0.38	+1.3
1,032,657	+		MPMX19_03603	0.38	-0.6
1,032,657	+		MPMX19_03603	0.38	-0.5
1,032,657	+		MPMX19_03603	0.38	+0.4
1,032,657	+		MPMX19_03603	0.38	+0.1
1,032,658	-		MPMX19_03603	0.38	-2.3
1,032,658	-		MPMX19_03603	0.38	+0.5
1,032,658	-		MPMX19_03603	0.38	-0.5
1,032,658	-		MPMX19_03603	0.38	-0.6
1,032,658	-		MPMX19_03603	0.38	+1.3
1,032,658	-		MPMX19_03603	0.38	+0.5
1,032,658	-		MPMX19_03603	0.38	+1.3
1,032,658	-		MPMX19_03603	0.38	-1.6
1,032,658	-		MPMX19_03603	0.38	-1.5
1,032,886	-		MPMX19_03603	0.62	-0.9
1,032,886	-		MPMX19_03603	0.62	+1.5
1,032,937	-		MPMX19_03603	0.67	-2.3
1,032,954	+		MPMX19_03603	0.69	-0.8
1,032,954	+		MPMX19_03603	0.69	-1.6
1,032,955	-		MPMX19_03603	0.69	-1.5
1,032,955	-		MPMX19_03603	0.69	-0.0
1,032,993	+		MPMX19_03603	0.73	-1.4
1,032,993	+		MPMX19_03603	0.73	+0.6
1,032,993	+		MPMX19_03603	0.73	-1.6
1,032,993	+		MPMX19_03603	0.73	-0.1
1,032,993	+		MPMX19_03603	0.73	-0.7
1,032,993	+		MPMX19_03603	0.73	-2.9
1,032,994	-		MPMX19_03603	0.73	-1.7
1,032,994	-		MPMX19_03603	0.73	+0.4
1,033,018	-		MPMX19_03603	0.76	-0.6
1,033,035	+		MPMX19_03603	0.77	+0.1
1,033,036	-		MPMX19_03603	0.78	+0.1
1,033,036	-		MPMX19_03603	0.78	-0.4
1,033,122	+		MPMX19_03603	0.87	-0.5
1,033,122	+		MPMX19_03603	0.87	-0.7
1,033,123	-		MPMX19_03603	0.87	+0.3
1,033,123	-		MPMX19_03603	0.87	-1.4
1,033,123	-		MPMX19_03603	0.87	-0.7
1,033,308	+				+0.6
1,033,364	+				-0.3
1,033,448	+				+0.2
1,033,448	+				-1.1
1,033,448	+				-0.3
1,033,448	+				-0.0
1,033,448	+				+0.3
1,033,448	+				+0.5
1,033,448	+				-0.1
1,033,449	-				+0.3
1,033,449	-				+0.7
1,033,449	-				-0.6
1,033,449	-				+0.0
1,033,449	-				-1.1
1,033,449	-				-1.4
1,033,449	-				+0.4
1,033,449	-				-1.3
1,033,652	+		MPMX19_03604	0.18	-0.5
1,033,653	-		MPMX19_03604	0.18	+0.8
1,033,653	-		MPMX19_03604	0.18	-0.8
1,033,653	-		MPMX19_03604	0.18	-0.1
1,033,653	-		MPMX19_03604	0.18	+0.0
1,033,653	-		MPMX19_03604	0.18	-0.2
1,033,673	+		MPMX19_03604	0.20	+0.4
1,033,673	+		MPMX19_03604	0.20	+0.7
1,033,674	-		MPMX19_03604	0.20	-0.1
1,033,674	-		MPMX19_03604	0.20	+0.1
1,033,697	+		MPMX19_03604	0.22	-0.3
1,033,697	+		MPMX19_03604	0.22	-0.4
1,033,697	+		MPMX19_03604	0.22	-0.3
1,033,697	+		MPMX19_03604	0.22	+1.3
1,033,698	-		MPMX19_03604	0.22	-1.2
1,033,698	-		MPMX19_03604	0.22	+0.1
1,033,698	-		MPMX19_03604	0.22	+1.2
1,033,709	+		MPMX19_03604	0.23	+0.6
1,033,709	+		MPMX19_03604	0.23	+1.3
1,033,709	+		MPMX19_03604	0.23	-0.5
1,033,709	+		MPMX19_03604	0.23	-0.3
1,033,709	+		MPMX19_03604	0.23	+0.5
1,033,709	+		MPMX19_03604	0.23	-0.3
1,033,709	+		MPMX19_03604	0.23	+1.0
1,033,709	+		MPMX19_03604	0.23	-0.3
1,033,709	+		MPMX19_03604	0.23	+0.7
1,033,709	+		MPMX19_03604	0.23	-0.1
1,033,709	+		MPMX19_03604	0.23	-0.6
1,033,709	+		MPMX19_03604	0.23	+0.5
1,033,709	+		MPMX19_03604	0.23	+0.6
1,033,709	+		MPMX19_03604	0.23	-0.3
1,033,709	+		MPMX19_03604	0.23	-0.2
1,033,709	+		MPMX19_03604	0.23	-0.4
1,033,709	+		MPMX19_03604	0.23	+0.9
1,033,709	+		MPMX19_03604	0.23	+0.0
1,033,710	-		MPMX19_03604	0.23	-0.6
1,033,710	-		MPMX19_03604	0.23	+0.2
1,033,710	-		MPMX19_03604	0.23	+1.2
1,033,710	-		MPMX19_03604	0.23	-0.5
1,033,710	-		MPMX19_03604	0.23	-1.3
1,033,710	-		MPMX19_03604	0.23	-0.5
1,033,710	-		MPMX19_03604	0.23	-0.5
1,033,710	-		MPMX19_03604	0.23	+0.8
1,033,710	-		MPMX19_03604	0.23	+0.7
1,033,710	-		MPMX19_03604	0.23	-0.4
1,033,710	-		MPMX19_03604	0.23	-0.4
1,033,710	-		MPMX19_03604	0.23	-1.0
1,033,710	-		MPMX19_03604	0.23	-0.8
1,033,710	-		MPMX19_03604	0.23	-0.2
1,033,710	-		MPMX19_03604	0.23	-0.1
1,033,710	-		MPMX19_03604	0.23	-0.8
1,033,710	-		MPMX19_03604	0.23	-0.5
1,033,710	-		MPMX19_03604	0.23	-0.1
1,033,710	-		MPMX19_03604	0.23	-1.1
1,033,710	-		MPMX19_03604	0.23	-0.1
1,033,710	-		MPMX19_03604	0.23	+0.4
1,033,715	+		MPMX19_03604	0.23	-0.3
1,033,715	+		MPMX19_03604	0.23	+0.1
1,033,716	-		MPMX19_03604	0.23	-0.1
1,033,716	-		MPMX19_03604	0.23	-0.9
1,033,782	-		MPMX19_03604	0.28	+0.3
1,033,802	+		MPMX19_03604	0.30	-2.6
1,033,802	+		MPMX19_03604	0.30	+0.5
1,033,803	-		MPMX19_03604	0.30	-1.6
1,033,803	-		MPMX19_03604	0.30	-0.5
1,033,803	-		MPMX19_03604	0.30	-0.3
1,034,006	+		MPMX19_03604	0.45	+1.0
1,034,006	+		MPMX19_03604	0.45	+0.5
1,034,007	-		MPMX19_03604	0.45	-0.8
1,034,007	-		MPMX19_03604	0.45	-1.9
1,034,174	+		MPMX19_03604	0.58	-0.6
1,034,174	+		MPMX19_03604	0.58	+0.3
1,034,174	+		MPMX19_03604	0.58	-0.1
1,034,174	+		MPMX19_03604	0.58	+0.4
1,034,174	+		MPMX19_03604	0.58	-0.1
1,034,174	+		MPMX19_03604	0.58	+1.5
1,034,174	+		MPMX19_03604	0.58	-0.1
1,034,174	+		MPMX19_03604	0.58	-0.1
1,034,174	+		MPMX19_03604	0.58	+0.5
1,034,175	-		MPMX19_03604	0.58	-0.1
1,034,175	-		MPMX19_03604	0.58	+0.2
1,034,175	-		MPMX19_03604	0.58	+0.9
1,034,175	-		MPMX19_03604	0.58	+1.0
1,034,175	-		MPMX19_03604	0.58	-0.1
1,034,175	-		MPMX19_03604	0.58	+1.2
1,034,175	-		MPMX19_03604	0.58	-0.1
1,034,402	+		MPMX19_03604	0.75	-2.0
1,034,402	+		MPMX19_03604	0.75	-1.0
1,034,403	-		MPMX19_03604	0.75	+1.5
1,034,403	-		MPMX19_03604	0.75	+0.2
1,034,423	+		MPMX19_03604	0.77	-1.3
1,034,423	+		MPMX19_03604	0.77	+0.2
1,034,423	+		MPMX19_03604	0.77	+0.8
1,034,423	+		MPMX19_03604	0.77	+0.2
1,034,424	-		MPMX19_03604	0.77	-0.2
1,034,424	-		MPMX19_03604	0.77	-1.5
1,034,424	-		MPMX19_03604	0.77	-0.3
1,034,709	+				-0.3
1,034,709	+				+0.1
1,034,709	+				+0.7
1,034,710	-				-1.5
1,034,862	+				+0.0
1,034,940	+		MPMX19_03605	0.16	-0.0
1,034,940	+		MPMX19_03605	0.16	+0.3
1,034,940	+		MPMX19_03605	0.16	-0.2
1,034,941	-		MPMX19_03605	0.16	+0.1
1,034,941	-		MPMX19_03605	0.16	-2.3
1,034,941	-		MPMX19_03605	0.16	-0.2
1,035,402	+		MPMX19_03605	0.62	-0.1
1,035,402	+		MPMX19_03605	0.62	-1.4
1,035,402	+		MPMX19_03605	0.62	-2.9
1,035,402	+		MPMX19_03605	0.62	+0.3
1,035,402	+		MPMX19_03605	0.62	-0.5
1,035,402	+		MPMX19_03605	0.62	-0.3
1,035,402	+		MPMX19_03605	0.62	-0.4
1,035,403	-		MPMX19_03605	0.62	-1.1
1,035,403	-		MPMX19_03605	0.62	-1.3
1,035,528	+		MPMX19_03605	0.74	+0.7
1,035,528	+		MPMX19_03605	0.74	-0.5
1,035,529	-		MPMX19_03605	0.74	-0.3
1,035,529	-		MPMX19_03605	0.74	+0.3
1,035,529	-		MPMX19_03605	0.74	-0.5
1,035,529	-		MPMX19_03605	0.74	-0.9
1,035,529	-		MPMX19_03605	0.74	-1.3
1,035,529	-		MPMX19_03605	0.74	-0.4
1,035,529	-		MPMX19_03605	0.74	-0.4
1,035,529	-		MPMX19_03605	0.74	-2.7
1,035,687	+				-0.6
1,035,687	+				-1.3
1,035,687	+				-1.0
1,035,687	+				-1.9
1,035,687	+				-0.6
1,035,687	+				+0.5
1,035,687	+				+0.0
1,035,687	+				+0.2
1,035,688	-				+0.8
1,035,688	-				+1.2
1,035,688	-				+1.2
1,035,688	-				-0.1
1,035,688	-				+0.4
1,035,688	-				+0.7
1,035,688	-				-0.5
1,035,688	-				-1.6
1,035,688	-				-0.4
1,035,713	+				+0.5
1,035,713	+				-0.6
1,035,713	+				+2.9
1,035,713	+				+1.0
1,035,713	+				-0.8
1,035,714	-				-0.8
1,035,714	-				-0.8
1,035,714	-				+0.6
1,035,714	-				+1.1
1,035,714	-				-0.5
1,035,714	-				-0.4