Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02700

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,826,062	+		MPMX19_02699	0.26	+2.1
2,826,063	-		MPMX19_02699	0.27	-0.6
2,826,063	-		MPMX19_02699	0.27	-0.3
2,826,215	+		MPMX19_02699	0.38	-1.1
2,826,215	+		MPMX19_02699	0.38	-1.9
2,826,215	+		MPMX19_02699	0.38	-0.9
2,826,216	-		MPMX19_02699	0.38	-1.0
2,826,216	-		MPMX19_02699	0.38	-1.3
2,826,229	+		MPMX19_02699	0.39	-0.7
2,826,229	+		MPMX19_02699	0.39	+0.7
2,826,229	+		MPMX19_02699	0.39	+0.9
2,826,229	+		MPMX19_02699	0.39	-0.7
2,826,579	+		MPMX19_02699	0.64	-1.0
2,826,579	+		MPMX19_02699	0.64	+0.1
2,826,579	+		MPMX19_02699	0.64	+0.3
2,826,579	+		MPMX19_02699	0.64	+0.0
2,826,580	-		MPMX19_02699	0.64	-0.7
2,826,580	-		MPMX19_02699	0.64	-2.3
2,826,580	-		MPMX19_02699	0.64	-0.9
2,826,580	-		MPMX19_02699	0.64	-0.3
2,826,587	+		MPMX19_02699	0.65	-0.6
2,826,587	+		MPMX19_02699	0.65	-0.9
2,826,587	+		MPMX19_02699	0.65	+0.1
2,826,588	-		MPMX19_02699	0.65	-0.5
2,826,848	+		MPMX19_02699	0.84	-0.6
2,826,848	+		MPMX19_02699	0.84	+0.2
2,826,848	+		MPMX19_02699	0.84	-1.3
2,826,848	+		MPMX19_02699	0.84	-0.1
2,826,848	+		MPMX19_02699	0.84	-1.6
2,826,848	+		MPMX19_02699	0.84	-1.7
2,826,848	+		MPMX19_02699	0.84	-0.3
2,826,848	+		MPMX19_02699	0.84	-0.5
2,826,848	+		MPMX19_02699	0.84	+0.1
2,826,848	+		MPMX19_02699	0.84	-0.3
2,826,848	+		MPMX19_02699	0.84	-1.6
2,826,848	+		MPMX19_02699	0.84	+0.1
2,826,849	-		MPMX19_02699	0.84	+0.7
2,826,849	-		MPMX19_02699	0.84	-0.5
2,826,849	-		MPMX19_02699	0.84	-1.0
2,826,849	-		MPMX19_02699	0.84	+0.1
2,826,849	-		MPMX19_02699	0.84	-0.0
2,826,849	-		MPMX19_02699	0.84	-1.7
2,826,849	-		MPMX19_02699	0.84	-0.4
2,826,849	-		MPMX19_02699	0.84	-0.1
2,826,849	-		MPMX19_02699	0.84	-0.0
2,826,849	-		MPMX19_02699	0.84	-0.0
2,826,849	-		MPMX19_02699	0.84	+0.5
2,826,849	-		MPMX19_02699	0.84	-0.6
2,826,849	-		MPMX19_02699	0.84	+0.7
2,826,849	-		MPMX19_02699	0.84	+0.9
2,826,849	-		MPMX19_02699	0.84	-1.1
2,826,849	-		MPMX19_02699	0.84	-0.5
2,826,849	-		MPMX19_02699	0.84	-0.4
2,826,849	-		MPMX19_02699	0.84	-0.9
2,826,849	-		MPMX19_02699	0.84	+0.5
2,826,849	-		MPMX19_02699	0.84	-0.5
2,827,194	+		MPMX19_02700	0.64	-0.9
2,827,194	+		MPMX19_02700	0.64	-1.3
2,827,194	+		MPMX19_02700	0.64	-0.7
2,827,194	+		MPMX19_02700	0.64	-0.3
2,827,194	+		MPMX19_02700	0.64	-0.3
2,827,194	+		MPMX19_02700	0.64	+0.1
2,827,194	+		MPMX19_02700	0.64	-0.6
2,827,195	-		MPMX19_02700	0.65	-0.0
2,827,195	-		MPMX19_02700	0.65	+0.3
2,827,195	-		MPMX19_02700	0.65	-0.7
2,827,195	-		MPMX19_02700	0.65	+1.7
2,827,195	-		MPMX19_02700	0.65	-0.4
2,827,195	-		MPMX19_02700	0.65	-1.1
2,827,195	-		MPMX19_02700	0.65	-1.4
2,827,256	-				-2.1
2,827,353	-				-0.9
2,827,353	-				-0.2
2,827,371	+				-1.1
2,827,371	+				+1.3
2,827,371	+				-0.4
2,827,371	+				-0.6
2,827,371	+				-0.1
2,827,371	+				+0.9
2,827,371	+				-3.2
2,827,371	+				-1.3
2,827,371	+				-0.1
2,827,371	+				-2.3
2,827,371	+				+0.7
2,827,371	+				-1.9
2,827,371	+				-0.7
2,827,371	+				-2.5
2,827,371	+				-0.0
2,827,371	+				-0.7
2,827,372	-				+0.4
2,827,372	-				+0.1
2,827,372	-				-0.9
2,827,372	-				-0.0
2,827,372	-				-0.6
2,827,372	-				+0.4
2,827,372	-				+0.3
2,827,372	-				-0.1
2,827,372	-				-1.4
2,827,379	+				-0.6
2,827,380	-				-0.8
2,827,380	-				+0.5
2,827,380	-				-0.1
2,827,380	-				-0.9
2,827,380	-				+0.3
2,827,384	+				-1.0
2,827,384	+				-0.2
2,827,385	-				-0.9
2,827,393	-				+0.1
2,827,393	-				+0.0
2,827,467	+				+2.0
2,827,468	-				+0.5
2,827,468	-				+0.2
2,827,468	-				-0.8
2,827,468	-				-0.4
2,827,548	-				+0.3
2,827,572	+				-1.1
2,827,572	+				-1.2
2,827,572	+				+1.6
2,827,573	-				-0.6
2,827,573	-				+0.1
2,827,573	-				-0.4
2,827,573	-				-0.6
2,827,613	+				-1.4
2,827,614	-				-0.7
2,827,614	-				+1.5
2,827,614	-				-1.3
2,827,614	-				-0.9
2,827,614	-				+1.7
2,827,657	+				-0.5
2,827,657	+				-0.9
2,827,666	+				-1.1
2,827,682	+				+0.5
2,827,682	+				+1.4
2,827,683	-				+1.7
2,827,683	-				-1.6
2,827,724	+				+0.5
2,827,724	+				-0.0
2,827,724	+				+0.7
2,827,724	+				-0.3
2,827,724	+				-0.8
2,827,725	-				+0.7
2,827,725	-				-0.4
2,827,725	-				-2.4
2,827,725	-				-1.3
2,827,750	+				+0.1
2,827,750	+				+1.7
2,827,751	-				+0.7
2,827,751	-				+1.0
2,827,761	+				+1.6
2,827,761	+				-0.3
2,827,774	+				+0.2
2,827,774	+				+1.3
2,827,775	-				-1.3
2,827,775	-				+1.7
2,827,775	-				-0.9
2,827,775	-				+0.4
2,827,834	+		MPMX19_02701	0.12	-0.7
2,827,834	+		MPMX19_02701	0.12	-0.4
2,827,834	+		MPMX19_02701	0.12	+0.1
2,827,834	+		MPMX19_02701	0.12	+0.4
2,827,834	+		MPMX19_02701	0.12	-0.4
2,827,834	+		MPMX19_02701	0.12	-1.0
2,827,834	+		MPMX19_02701	0.12	-1.4
2,827,834	+		MPMX19_02701	0.12	+0.4
2,827,834	+		MPMX19_02701	0.12	+1.1
2,827,834	+		MPMX19_02701	0.12	+0.0
2,827,834	+		MPMX19_02701	0.12	-1.2
2,827,835	-		MPMX19_02701	0.12	-0.5
2,827,835	-		MPMX19_02701	0.12	-1.6
2,827,835	-		MPMX19_02701	0.12	-1.7
2,827,835	-		MPMX19_02701	0.12	-0.3
2,827,835	-		MPMX19_02701	0.12	-0.4
2,827,835	-		MPMX19_02701	0.12	+0.0
2,827,835	-		MPMX19_02701	0.12	-0.9
2,827,835	-		MPMX19_02701	0.12	+0.9
2,827,835	-		MPMX19_02701	0.12	+1.0
2,827,835	-		MPMX19_02701	0.12	-2.4
2,827,941	+		MPMX19_02701	0.24	+0.9
2,827,942	-		MPMX19_02701	0.24	-2.0
2,827,942	-		MPMX19_02701	0.24	+0.7
2,827,952	-		MPMX19_02701	0.25	+0.6
2,827,990	+		MPMX19_02701	0.29	-0.8
2,827,990	+		MPMX19_02701	0.29	+1.0
2,827,990	+		MPMX19_02701	0.29	+0.7
2,827,991	-		MPMX19_02701	0.29	-0.5
2,828,079	+		MPMX19_02701	0.39	+1.5
2,828,079	+		MPMX19_02701	0.39	-0.3
2,828,079	+		MPMX19_02701	0.39	-0.3
2,828,079	+		MPMX19_02701	0.39	+0.5
2,828,079	+		MPMX19_02701	0.39	-1.6
2,828,080	-		MPMX19_02701	0.39	+0.1
2,828,085	+		MPMX19_02701	0.39	-1.3
2,828,085	+		MPMX19_02701	0.39	+0.0
2,828,085	+		MPMX19_02701	0.39	-0.9
2,828,086	-		MPMX19_02701	0.39	-0.3
2,828,086	-		MPMX19_02701	0.39	+0.6
2,828,086	-		MPMX19_02701	0.39	-2.6
2,828,104	+		MPMX19_02701	0.41	-0.0
2,828,104	+		MPMX19_02701	0.41	+1.0
2,828,104	+		MPMX19_02701	0.41	-0.4
2,828,104	+		MPMX19_02701	0.41	+1.1
2,828,104	+		MPMX19_02701	0.41	-1.4
2,828,104	+		MPMX19_02701	0.41	-1.1
2,828,105	-		MPMX19_02701	0.41	-1.2
2,828,105	-		MPMX19_02701	0.41	-1.1
2,828,105	-		MPMX19_02701	0.41	-2.4
2,828,105	-		MPMX19_02701	0.41	-0.4
2,828,105	-		MPMX19_02701	0.41	+0.1
2,828,105	-		MPMX19_02701	0.41	-0.3
2,828,105	-		MPMX19_02701	0.41	-2.4
2,828,125	+		MPMX19_02701	0.44	-1.4
2,828,125	+		MPMX19_02701	0.44	-1.1
2,828,125	+		MPMX19_02701	0.44	+0.7
2,828,125	+		MPMX19_02701	0.44	+0.1
2,828,125	+		MPMX19_02701	0.44	+1.0
2,828,128	+		MPMX19_02701	0.44	-0.3
2,828,128	+		MPMX19_02701	0.44	-0.0
2,828,129	-		MPMX19_02701	0.44	+0.7
2,828,129	-		MPMX19_02701	0.44	-0.6
2,828,129	-		MPMX19_02701	0.44	-2.6
2,828,129	-		MPMX19_02701	0.44	-0.2
2,828,129	-		MPMX19_02701	0.44	+1.3
2,828,170	+		MPMX19_02701	0.48	-0.6
2,828,192	+		MPMX19_02701	0.51	+0.3
2,828,195	+		MPMX19_02701	0.51	-0.1
2,828,195	+		MPMX19_02701	0.51	-0.6
2,828,195	+		MPMX19_02701	0.51	+1.0
2,828,195	+		MPMX19_02701	0.51	-1.1
2,828,196	-		MPMX19_02701	0.51	-1.4
2,828,196	-		MPMX19_02701	0.51	+0.1
2,828,196	-		MPMX19_02701	0.51	-1.0
2,828,250	+		MPMX19_02701	0.57	+1.0