Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02606

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,722,941	+				-1.2
2,723,324	+		MPMX19_02604	0.77	-1.9
2,723,325	-		MPMX19_02604	0.77	+1.5
2,723,325	-		MPMX19_02604	0.77	+0.1
2,723,326	+		MPMX19_02604	0.77	-1.7
2,723,326	+		MPMX19_02604	0.77	+1.0
2,723,326	+		MPMX19_02604	0.77	-0.0
2,723,326	+		MPMX19_02604	0.77	-1.0
2,723,326	+		MPMX19_02604	0.77	+0.7
2,723,326	+		MPMX19_02604	0.77	-1.1
2,723,326	+		MPMX19_02604	0.77	-0.0
2,723,326	+		MPMX19_02604	0.77	+1.0
2,723,326	+		MPMX19_02604	0.77	+1.0
2,723,326	+		MPMX19_02604	0.77	+0.6
2,723,327	-		MPMX19_02604	0.77	-0.6
2,723,327	-		MPMX19_02604	0.77	+1.0
2,723,327	-		MPMX19_02604	0.77	-0.1
2,723,327	-		MPMX19_02604	0.77	+1.0
2,723,327	-		MPMX19_02604	0.77	-0.1
2,723,369	-		MPMX19_02604	0.86	+1.1
2,723,369	-		MPMX19_02604	0.86	+0.8
2,723,371	+		MPMX19_02604	0.87	-1.6
2,723,371	+		MPMX19_02604	0.87	-0.5
2,723,371	+		MPMX19_02604	0.87	-0.3
2,723,371	+		MPMX19_02604	0.87	+0.4
2,723,372	-		MPMX19_02604	0.87	+0.2
2,723,372	-		MPMX19_02604	0.87	-0.6
2,723,372	-		MPMX19_02604	0.87	-1.3
2,723,431	+				-1.1
2,723,432	-				-0.1
2,723,432	-				+0.4
2,723,432	-				-0.9
2,723,744	+				+1.3
2,723,744	+				-1.1
2,723,744	+				-0.6
2,723,744	+				-1.4
2,723,744	+				-0.1
2,723,744	+				+0.1
2,723,744	+				-1.0
2,723,744	+				-0.1
2,723,744	+				-1.5
2,723,744	+				-0.3
2,723,745	-				-0.2
2,723,745	-				-0.0
2,723,745	-				-0.7
2,723,745	-				-0.6
2,723,746	+				-0.3
2,723,746	+				-0.2
2,723,746	+				-1.3
2,723,747	-				-0.3
2,723,747	-				-0.5
2,723,747	-				-0.3
2,723,747	-				-0.1
2,723,757	-				-2.9
2,723,757	-				+1.1
2,723,778	+				-1.9
2,723,778	+				-0.9
2,723,778	+				-1.6
2,723,778	+				-0.2
2,723,778	+				-0.6
2,723,778	+				-0.3
2,723,778	+				+0.2
2,723,778	+				-0.1
2,723,778	+				-1.4
2,723,778	+				+0.6
2,723,779	-				-0.3
2,723,779	-				-1.1
2,723,779	-				-0.7
2,723,779	-				-0.5
2,723,779	-				+0.4
2,723,779	-				+0.1
2,723,779	-				+0.6
2,723,779	-				-0.6
2,723,779	-				-0.7
2,723,779	-				-1.6
2,723,779	-				-0.4
2,723,779	-				-0.2
2,723,779	-				-0.9
2,723,855	+		MPMX19_02606	0.18	-0.9
2,723,855	+		MPMX19_02606	0.18	-1.3
2,723,855	+		MPMX19_02606	0.18	-1.1
2,723,855	+		MPMX19_02606	0.18	-2.4
2,723,856	-		MPMX19_02606	0.18	-0.6
2,723,856	-		MPMX19_02606	0.18	+0.1
2,723,856	-		MPMX19_02606	0.18	-0.8
2,723,856	-		MPMX19_02606	0.18	-1.5
2,723,856	-		MPMX19_02606	0.18	-0.4
2,723,856	-		MPMX19_02606	0.18	-0.2
2,723,856	-		MPMX19_02606	0.18	-1.0
2,723,856	-		MPMX19_02606	0.18	-1.3
2,723,898	+		MPMX19_02606	0.28	-0.4
2,723,898	+		MPMX19_02606	0.28	-0.6
2,723,898	+		MPMX19_02606	0.28	-0.4
2,723,898	+		MPMX19_02606	0.28	-0.1
2,723,898	+		MPMX19_02606	0.28	-1.7
2,723,898	+		MPMX19_02606	0.28	+1.1
2,723,898	+		MPMX19_02606	0.28	+0.6
2,723,898	+		MPMX19_02606	0.28	-0.5
2,723,898	+		MPMX19_02606	0.28	-2.0
2,723,898	+		MPMX19_02606	0.28	+0.7
2,723,898	+		MPMX19_02606	0.28	-1.2
2,723,898	+		MPMX19_02606	0.28	-0.0
2,723,899	-		MPMX19_02606	0.29	-1.0
2,723,899	-		MPMX19_02606	0.29	+0.4
2,723,899	-		MPMX19_02606	0.29	-0.6
2,723,899	-		MPMX19_02606	0.29	+0.3
2,723,899	-		MPMX19_02606	0.29	-2.2
2,723,899	-		MPMX19_02606	0.29	+1.0
2,723,899	-		MPMX19_02606	0.29	+0.5
2,723,899	-		MPMX19_02606	0.29	-1.1
2,723,899	-		MPMX19_02606	0.29	-1.1
2,723,899	-		MPMX19_02606	0.29	+0.3
2,723,899	-		MPMX19_02606	0.29	-1.1
2,723,991	+		MPMX19_02606	0.51	-0.0
2,723,991	+		MPMX19_02606	0.51	-0.8
2,723,991	+		MPMX19_02606	0.51	+0.1
2,723,991	+		MPMX19_02606	0.51	-2.0
2,723,992	-		MPMX19_02606	0.51	+0.3
2,723,992	-		MPMX19_02606	0.51	-0.6
2,723,992	-		MPMX19_02606	0.51	-1.4
2,723,993	+		MPMX19_02606	0.51	-0.2
2,723,993	+		MPMX19_02606	0.51	+0.9
2,723,993	+		MPMX19_02606	0.51	+0.1
2,723,993	+		MPMX19_02606	0.51	+0.1
2,723,993	+		MPMX19_02606	0.51	+0.9
2,723,993	+		MPMX19_02606	0.51	+1.1
2,723,993	+		MPMX19_02606	0.51	+0.6
2,723,993	+		MPMX19_02606	0.51	-1.1
2,723,993	+		MPMX19_02606	0.51	+0.6
2,723,993	+		MPMX19_02606	0.51	-0.0
2,723,993	+		MPMX19_02606	0.51	+0.3
2,723,993	+		MPMX19_02606	0.51	-2.3
2,723,993	+		MPMX19_02606	0.51	-1.9
2,723,993	+		MPMX19_02606	0.51	+2.1
2,723,993	+		MPMX19_02606	0.51	-0.8
2,723,993	+		MPMX19_02606	0.51	-1.6
2,723,994	-		MPMX19_02606	0.51	+1.3
2,723,994	-		MPMX19_02606	0.51	-0.1
2,723,994	-		MPMX19_02606	0.51	+0.6
2,723,994	-		MPMX19_02606	0.51	-0.9
2,723,994	-		MPMX19_02606	0.51	-0.5
2,724,054	+		MPMX19_02606	0.66	-2.1
2,724,054	+		MPMX19_02606	0.66	-1.1
2,724,054	+		MPMX19_02606	0.66	+0.7
2,724,055	-		MPMX19_02606	0.66	-2.1
2,724,055	-		MPMX19_02606	0.66	-1.0
2,724,055	-		MPMX19_02606	0.66	+1.1
2,724,055	-		MPMX19_02606	0.66	+1.1
2,724,055	-		MPMX19_02606	0.66	-0.0
2,724,059	+		MPMX19_02606	0.67	+0.1
2,724,059	+		MPMX19_02606	0.67	+0.2
2,724,059	+		MPMX19_02606	0.67	-0.6
2,724,059	+		MPMX19_02606	0.67	-0.7
2,724,060	-		MPMX19_02606	0.67	-1.9
2,724,060	-		MPMX19_02606	0.67	+0.0
2,724,060	-		MPMX19_02606	0.67	-1.3
2,724,060	-		MPMX19_02606	0.67	-0.1
2,724,060	-		MPMX19_02606	0.67	-1.6
2,724,060	-		MPMX19_02606	0.67	+0.4
2,724,060	-		MPMX19_02606	0.67	-1.6
2,724,060	-		MPMX19_02606	0.67	-2.0
2,724,060	-		MPMX19_02606	0.67	-1.0
2,724,075	+		MPMX19_02606	0.71	-0.9
2,724,126	+		MPMX19_02606	0.83	-1.1
2,724,126	+		MPMX19_02606	0.83	-1.0
2,724,126	+		MPMX19_02606	0.83	-0.6
2,724,126	+		MPMX19_02606	0.83	-0.7
2,724,126	+		MPMX19_02606	0.83	+0.7
2,724,126	+		MPMX19_02606	0.83	+0.7
2,724,126	+		MPMX19_02606	0.83	-0.9
2,724,126	+		MPMX19_02606	0.83	+0.4
2,724,127	-		MPMX19_02606	0.84	-1.4
2,724,127	-		MPMX19_02606	0.84	+1.0
2,724,127	-		MPMX19_02606	0.84	+0.6
2,724,127	-		MPMX19_02606	0.84	+0.1
2,724,127	-		MPMX19_02606	0.84	+2.3
2,724,127	-		MPMX19_02606	0.84	-1.2
2,724,266	+				+1.0
2,724,266	+				+0.5
2,724,319	+				-0.3
2,724,319	+				+1.0
2,724,319	+				-0.1
2,724,319	+				-1.3
2,724,319	+				+0.5
2,724,319	+				-0.8
2,724,319	+				-0.1
2,724,319	+				+0.9
2,724,319	+				+0.5
2,724,319	+				-2.1
2,724,320	-				-0.5
2,724,320	-				-0.9
2,724,320	-				+1.2
2,724,320	-				+0.7
2,724,320	-				-1.6
2,724,320	-				-1.2
2,724,320	-				-0.0
2,724,320	-				-0.6
2,724,320	-				+0.8
2,724,354	+				-0.9
2,724,354	+				+0.2
2,724,355	-				-0.8
2,724,355	-				+0.1
2,724,355	-				-1.5
2,724,355	-				-0.9
2,724,355	-				-0.1
2,724,355	-				+1.0
2,724,355	-				-0.9
2,724,355	-				-0.6
2,724,355	-				-0.4
2,724,355	-				+0.1
2,724,355	-				+0.1
2,724,355	-				-0.7
2,724,392	+				+1.9
2,724,392	+				-1.3
2,724,392	+				+0.0
2,724,392	+				-0.2
2,724,392	+				+0.4
2,724,392	+				-2.4
2,724,392	+				-0.4
2,724,392	+				-0.6
2,724,392	+				-0.2
2,724,392	+				+1.0
2,724,392	+				-0.1
2,724,393	-				+0.1
2,724,393	-				+0.7
2,724,393	-				+0.3
2,724,393	-				-0.1
2,724,393	-				-0.3
2,724,393	-				-0.0
2,724,393	-				+0.1
2,724,393	-				-2.1
2,724,393	-				+0.4
2,724,393	-				+0.8
2,724,393	-				-1.6
2,724,393	-				+0.3
2,724,393	-				-2.3
2,724,501	+				+1.2
2,724,501	+				-0.3
2,724,501	+				+0.7
2,724,501	+				+0.7
2,724,501	+				+1.4
2,724,502	-				-0.3
2,724,502	-				+1.7
2,724,596	+				+0.7
2,724,596	+				+1.0
2,724,596	+				+0.1
2,724,596	+				+1.5
2,724,596	+				+0.7
2,724,596	+				-0.3
2,724,596	+				+1.7
2,724,596	+				-0.7
2,724,597	-				+1.3
2,724,597	-				-0.3
2,724,672	-				+3.3
2,724,822	+		MPMX19_02607	0.22	+0.1
2,724,822	+		MPMX19_02607	0.22	+0.7
2,724,822	+		MPMX19_02607	0.22	-0.6
2,724,822	+		MPMX19_02607	0.22	+0.7
2,724,822	+		MPMX19_02607	0.22	-0.6
2,724,822	+		MPMX19_02607	0.22	+0.7
2,724,823	-		MPMX19_02607	0.22	-0.9
2,724,823	-		MPMX19_02607	0.22	+2.0
2,724,823	-		MPMX19_02607	0.22	+0.1
2,724,823	-		MPMX19_02607	0.22	+0.7
2,724,823	-		MPMX19_02607	0.22	+0.1
2,724,885	+		MPMX19_02607	0.29	+1.7
2,724,885	+		MPMX19_02607	0.29	+2.9
2,724,960	+		MPMX19_02607	0.37	+1.7
2,725,005	+		MPMX19_02607	0.42	+0.1
2,725,005	+		MPMX19_02607	0.42	+1.1
2,725,006	-		MPMX19_02607	0.42	+0.1
2,725,006	-		MPMX19_02607	0.42	-1.3
2,725,006	-		MPMX19_02607	0.42	+1.7
2,725,020	+		MPMX19_02607	0.44	+1.7
2,725,020	+		MPMX19_02607	0.44	+0.7
2,725,020	+		MPMX19_02607	0.44	+0.7
2,725,021	-		MPMX19_02607	0.44	+0.1
2,725,045	-		MPMX19_02607	0.47	+1.7
2,725,140	+		MPMX19_02607	0.57	+0.1
2,725,140	+		MPMX19_02607	0.57	+3.3
2,725,140	+		MPMX19_02607	0.57	-2.0
2,725,140	+		MPMX19_02607	0.57	-0.4
2,725,140	+		MPMX19_02607	0.57	-0.6
2,725,140	+		MPMX19_02607	0.57	-0.3
2,725,140	+		MPMX19_02607	0.57	+1.1
2,725,140	+		MPMX19_02607	0.57	+1.0
2,725,140	+		MPMX19_02607	0.57	-1.1
2,725,140	+		MPMX19_02607	0.57	+0.1
2,725,141	-		MPMX19_02607	0.57	+1.7
2,725,141	-		MPMX19_02607	0.57	+2.3
2,725,141	-		MPMX19_02607	0.57	+0.7
2,725,141	-		MPMX19_02607	0.57	-0.3
2,725,141	-		MPMX19_02607	0.57	-0.3