Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05612

Experiment: beta-Cyclodextrin 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/mL (C)
1,130,190	-		BACOVA_05611	0.49	+0.2
1,130,190	-		BACOVA_05611	0.49	+0.7
1,130,196	-		BACOVA_05611	0.50	-0.7
1,130,197	+		BACOVA_05611	0.50	-1.8
1,130,197	+		BACOVA_05611	0.50	+1.1
1,130,198	-		BACOVA_05611	0.50	-0.7
1,130,213	+		BACOVA_05611	0.51	-0.1
1,130,213	+		BACOVA_05611	0.51	+0.4
1,130,218	+		BACOVA_05611	0.51	+0.8
1,130,274	-		BACOVA_05611	0.55	+0.5
1,130,293	+		BACOVA_05611	0.57	-1.9
1,130,294	-		BACOVA_05611	0.57	-0.1
1,130,323	+		BACOVA_05611	0.59	-1.6
1,130,357	+		BACOVA_05611	0.61	-0.3
1,130,358	-		BACOVA_05611	0.61	-0.5
1,130,368	-		BACOVA_05611	0.62	-1.0
1,130,385	+		BACOVA_05611	0.63	+0.9
1,130,508	-		BACOVA_05611	0.72	-0.5
1,130,508	-		BACOVA_05611	0.72	+0.4
1,130,509	+		BACOVA_05611	0.72	+0.4
1,130,528	+		BACOVA_05611	0.73	+0.6
1,130,602	+		BACOVA_05611	0.79	+0.3
1,130,666	+		BACOVA_05611	0.83	+2.4
1,130,667	-		BACOVA_05611	0.83	-1.0
1,130,667	-		BACOVA_05611	0.83	+0.5
1,130,667	-		BACOVA_05611	0.83	-0.0
1,130,689	-		BACOVA_05611	0.85	-0.1
1,130,807	+				+0.2
1,130,838	-				-0.7
1,130,853	-				+0.1
1,130,854	+				+2.6
1,130,877	+				-1.1
1,130,906	+				-1.5
1,130,914	+				-1.3
1,130,945	+				-0.6
1,130,971	-				-0.4
1,130,988	-				+0.3
1,130,999	-				-2.4
1,131,004	-				-2.5
1,131,031	-				+1.8
1,131,043	+				+1.1
1,131,043	+				-0.2
1,131,067	-				-0.1
1,131,087	+				+1.0
1,131,088	-				+2.1
1,131,099	-				-0.3
1,131,102	+				+0.4
1,131,103	-				-0.5
1,131,120	+				-0.3
1,131,150	-				-0.2
1,131,152	+				-0.6
1,131,153	-				-0.0
1,131,158	-				+0.3
1,131,158	-				+0.0
1,131,165	-				-1.1
1,131,167	+				-1.3
1,131,168	-				-2.0
1,131,168	-				+0.4
1,131,201	-				+0.5
1,131,270	-		BACOVA_05612	0.49	-1.0
1,131,270	-		BACOVA_05612	0.49	-1.6
1,131,302	+		BACOVA_05612	0.68	+0.9
1,131,305	+		BACOVA_05612	0.70	-0.6
1,131,306	-		BACOVA_05612	0.71	+1.3
1,131,313	-		BACOVA_05612	0.75	+1.1
1,131,333	+		BACOVA_05612	0.87	-0.4
1,131,386	-				+0.9
1,131,429	-				-0.6
1,131,434	+				+0.8
1,131,435	-				+0.4
1,131,453	+				-0.7
1,131,454	-				-0.7
1,131,454	-				-0.5
1,131,485	+				-0.4
1,131,486	-				-1.4
1,131,510	+				-0.6
1,131,514	-				+1.1
1,131,611	+		BACOVA_05613	0.14	+1.7
1,131,612	-		BACOVA_05613	0.14	+0.8
1,131,646	+		BACOVA_05613	0.15	-0.1
1,131,646	+		BACOVA_05613	0.15	-1.3
1,131,647	-		BACOVA_05613	0.15	-0.4
1,131,714	-		BACOVA_05613	0.19	+0.4
1,131,721	-		BACOVA_05613	0.19	+0.3
1,131,724	-		BACOVA_05613	0.19	-0.1
1,131,726	-		BACOVA_05613	0.20	-0.5
1,131,737	+		BACOVA_05613	0.20	-0.5
1,131,738	-		BACOVA_05613	0.20	+2.7
1,131,758	-		BACOVA_05613	0.21	-0.0
1,131,781	+		BACOVA_05613	0.22	-0.5
1,131,870	+		BACOVA_05613	0.27	+1.1
1,131,900	+		BACOVA_05613	0.29	-2.9
1,131,936	-		BACOVA_05613	0.31	+0.1
1,131,942	+		BACOVA_05613	0.31	+0.1
1,132,047	+		BACOVA_05613	0.36	-1.0
1,132,047	+		BACOVA_05613	0.36	-0.3
1,132,048	-		BACOVA_05613	0.36	-0.9
1,132,048	-		BACOVA_05613	0.36	-0.5
1,132,048	-		BACOVA_05613	0.36	-0.3
1,132,069	+		BACOVA_05613	0.38	-2.2
1,132,070	-		BACOVA_05613	0.38	+0.4
1,132,100	-		BACOVA_05613	0.39	-0.9
1,132,100	-		BACOVA_05613	0.39	+0.5
1,132,167	+		BACOVA_05613	0.43	+0.0
1,132,170	-		BACOVA_05613	0.43	-1.4
1,132,203	+		BACOVA_05613	0.45	+0.0
1,132,203	+		BACOVA_05613	0.45	+0.2
1,132,210	-		BACOVA_05613	0.45	+0.5
1,132,230	+		BACOVA_05613	0.46	-0.5
1,132,231	-		BACOVA_05613	0.46	-0.7
1,132,233	-		BACOVA_05613	0.46	-0.5
1,132,236	+		BACOVA_05613	0.46	+0.1
1,132,236	+		BACOVA_05613	0.46	+0.4
1,132,283	-		BACOVA_05613	0.49	-0.1
1,132,302	+		BACOVA_05613	0.50	-0.1
1,132,306	+		BACOVA_05613	0.50	-0.5
1,132,349	+		BACOVA_05613	0.52	-1.2