Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03750

Experiment: beta-Cyclodextrin 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/mL (C)
79,268	-				+1.4
79,269	+				-1.0
79,270	-				-0.3
79,326	+		BACOVA_03749	0.13	-0.5
79,331	-		BACOVA_03749	0.13	-0.9
79,375	+		BACOVA_03749	0.17	+0.7
79,375	+		BACOVA_03749	0.17	-0.2
79,376	-		BACOVA_03749	0.17	-1.5
79,379	+		BACOVA_03749	0.18	-0.5
79,451	-		BACOVA_03749	0.25	-1.0
79,459	+		BACOVA_03749	0.26	-1.0
79,508	+		BACOVA_03749	0.30	-0.6
79,513	+		BACOVA_03749	0.31	+1.3
79,529	+		BACOVA_03749	0.33	-1.2
79,530	-		BACOVA_03749	0.33	+0.6
79,530	-		BACOVA_03749	0.33	-0.5
79,531	+		BACOVA_03749	0.33	-2.6
79,531	+		BACOVA_03749	0.33	-2.6
79,533	+		BACOVA_03749	0.33	+1.7
79,533	+		BACOVA_03749	0.33	+0.5
79,577	-		BACOVA_03749	0.37	-1.2
79,598	-		BACOVA_03749	0.39	-0.1
79,601	-		BACOVA_03749	0.40	-1.1
79,602	+		BACOVA_03749	0.40	-0.6
79,602	+		BACOVA_03749	0.40	+0.2
79,603	-		BACOVA_03749	0.40	-1.7
79,659	+		BACOVA_03749	0.45	+0.1
79,660	-		BACOVA_03749	0.45	-0.3
79,660	-		BACOVA_03749	0.45	-2.3
79,667	-		BACOVA_03749	0.46	-1.7
79,697	-		BACOVA_03749	0.49	-1.7
79,711	+		BACOVA_03749	0.50	-0.9
79,711	+		BACOVA_03749	0.50	+1.0
79,714	+		BACOVA_03749	0.51	-0.8
79,786	+		BACOVA_03749	0.58	-0.3
79,892	-		BACOVA_03749	0.68	-0.7
79,959	+		BACOVA_03749	0.75	+1.0
79,963	+		BACOVA_03749	0.75	+0.3
80,003	-		BACOVA_03749	0.79	+0.7
80,017	+		BACOVA_03749	0.81	-0.3
80,018	-		BACOVA_03749	0.81	-1.1
80,026	+		BACOVA_03749	0.82	-1.1
80,027	-		BACOVA_03749	0.82	-0.9
80,035	+		BACOVA_03749	0.82	-1.6
80,068	+		BACOVA_03749	0.86	+0.5
80,119	+				-0.1
80,120	-				+0.5
80,120	-				-0.1
80,153	-				-0.6
80,153	-				-1.2
80,207	-				-0.7
80,227	+				-0.6
80,259	+				-2.3
80,260	-				+1.3
80,273	-				+1.3
80,299	+				-0.1
80,308	+				+0.9
80,316	+				+2.4
80,317	-				+0.9
80,355	+				+1.1
80,361	+				+0.6
80,369	+				-0.6
80,370	-				-2.1
80,376	-				-0.7
80,376	-				-0.7
80,409	-		BACOVA_03750	0.12	-2.3
80,453	-		BACOVA_03750	0.15	+0.6
80,454	+		BACOVA_03750	0.15	+1.0
80,455	-		BACOVA_03750	0.16	-0.7
80,456	+		BACOVA_03750	0.16	-1.3
80,457	-		BACOVA_03750	0.16	+0.7
80,457	-		BACOVA_03750	0.16	+0.9
80,485	-		BACOVA_03750	0.18	-0.9
80,488	+		BACOVA_03750	0.18	+1.7
80,489	-		BACOVA_03750	0.18	+0.1
80,489	-		BACOVA_03750	0.18	-0.2
80,493	+		BACOVA_03750	0.18	+0.5
80,529	+		BACOVA_03750	0.21	-1.6
80,573	+		BACOVA_03750	0.24	+1.1
80,573	+		BACOVA_03750	0.24	-0.9
80,611	-		BACOVA_03750	0.27	+1.1
80,615	+		BACOVA_03750	0.27	+0.3
80,626	-		BACOVA_03750	0.28	+0.4
80,629	+		BACOVA_03750	0.28	-0.4
80,661	+		BACOVA_03750	0.31	-0.6
80,662	-		BACOVA_03750	0.31	-0.2
80,669	+		BACOVA_03750	0.31	-0.0
80,670	-		BACOVA_03750	0.31	+0.7
80,670	-		BACOVA_03750	0.31	+0.2
80,674	-		BACOVA_03750	0.32	-1.2
80,691	+		BACOVA_03750	0.33	+1.3
80,691	+		BACOVA_03750	0.33	+0.6
80,698	-		BACOVA_03750	0.33	+0.7
80,699	+		BACOVA_03750	0.33	+0.3
80,709	-		BACOVA_03750	0.34	-0.5
80,751	+		BACOVA_03750	0.37	-0.4
80,751	+		BACOVA_03750	0.37	-0.5
80,754	+		BACOVA_03750	0.37	+1.8
80,756	+		BACOVA_03750	0.37	+1.5
80,880	+		BACOVA_03750	0.47	+0.4
80,881	-		BACOVA_03750	0.47	-2.0
80,885	+		BACOVA_03750	0.47	+1.4
80,918	+		BACOVA_03750	0.49	+2.2
80,923	-		BACOVA_03750	0.50	+0.5
80,935	+		BACOVA_03750	0.51	-0.7
80,989	-		BACOVA_03750	0.54	-0.0
81,200	+		BACOVA_03750	0.70	-0.8
81,209	+		BACOVA_03750	0.71	-1.1
81,209	+		BACOVA_03750	0.71	-0.5
81,213	+		BACOVA_03750	0.71	+1.0
81,214	-		BACOVA_03750	0.71	+0.3
81,220	+		BACOVA_03750	0.71	-1.5
81,313	-		BACOVA_03750	0.78	+0.1
81,425	+		BACOVA_03750	0.86	+0.3
81,446	-		BACOVA_03750	0.88	-2.1
81,516	+				+0.7
81,516	+				+0.1
81,517	-				-0.5
81,559	+				+1.0
81,559	+				+1.5
81,660	-				-0.4
81,678	+				-0.4
81,682	-		BACOVA_03751	0.13	-0.7
81,689	+		BACOVA_03751	0.19	-1.0
81,729	+		BACOVA_03751	0.56	-0.7
81,785	+				-0.1
81,792	-				-1.1
81,811	-				-1.4
81,814	+				-1.9
81,814	+				-1.1
81,814	+				-1.1
81,814	+				-0.2
81,815	-				-0.7
81,815	-				-0.3
81,815	-				-1.3
81,816	+				-2.3
81,816	+				-0.2
81,817	-				-0.6
81,835	-				-0.3
81,876	+				-0.8
81,888	+				-1.2
81,888	+				-0.9
81,888	+				-0.1
81,927	+				-1.4
81,928	-				-0.9
81,931	+				-0.8
81,932	-				-1.5
81,968	-				-1.3
82,035	-				-1.2
82,080	+				+0.4
82,179	+		BACOVA_03752	0.12	-2.0
82,194	+		BACOVA_03752	0.13	-0.7
82,239	+		BACOVA_03752	0.14	-1.2
82,279	-		BACOVA_03752	0.15	-0.3
82,349	+		BACOVA_03752	0.18	-1.5
82,480	-		BACOVA_03752	0.22	-1.1
82,498	-		BACOVA_03752	0.22	+0.4
82,554	+		BACOVA_03752	0.24	-0.2
82,572	+		BACOVA_03752	0.24	-1.2
82,597	+		BACOVA_03752	0.25	+0.2