Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00848

Experiment: beta-Cyclodextrin 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/mL (C)
106,201	+		BACOVA_00847	0.28	-0.3
106,249	-		BACOVA_00847	0.33	-0.7
106,249	-		BACOVA_00847	0.33	+1.1
106,277	-		BACOVA_00847	0.35	+2.4
106,277	-		BACOVA_00847	0.35	-0.5
106,277	-		BACOVA_00847	0.35	+2.1
106,277	-		BACOVA_00847	0.35	-0.2
106,298	+		BACOVA_00847	0.37	-0.3
106,319	-		BACOVA_00847	0.39	+0.7
106,452	+		BACOVA_00847	0.51	+0.1
106,452	+		BACOVA_00847	0.51	-2.2
106,459	+		BACOVA_00847	0.52	-0.5
106,459	+		BACOVA_00847	0.52	-1.2
106,460	-		BACOVA_00847	0.52	+1.1
106,503	+		BACOVA_00847	0.56	+1.3
106,504	-		BACOVA_00847	0.56	-1.8
106,506	+		BACOVA_00847	0.56	+0.9
106,507	-		BACOVA_00847	0.56	+0.7
106,511	-		BACOVA_00847	0.57	+1.1
106,538	-		BACOVA_00847	0.59	+1.0
106,552	-		BACOVA_00847	0.61	+0.2
106,620	-		BACOVA_00847	0.67	+0.3
106,668	-		BACOVA_00847	0.71	-3.2
106,688	-		BACOVA_00847	0.73	-0.7
106,692	+		BACOVA_00847	0.73	-0.3
106,693	-		BACOVA_00847	0.74	-0.2
106,693	-		BACOVA_00847	0.74	-0.3
106,693	-		BACOVA_00847	0.74	-0.9
106,693	-		BACOVA_00847	0.74	-0.6
106,695	-		BACOVA_00847	0.74	-0.3
106,697	-		BACOVA_00847	0.74	+0.4
106,701	+		BACOVA_00847	0.74	+0.3
106,702	-		BACOVA_00847	0.74	-0.7
106,702	-		BACOVA_00847	0.74	-1.5
106,711	-		BACOVA_00847	0.75	+0.2
106,749	+		BACOVA_00847	0.79	+0.2
106,778	+		BACOVA_00847	0.81	+0.6
106,779	-		BACOVA_00847	0.81	-0.3
106,779	-		BACOVA_00847	0.81	+0.7
106,835	+		BACOVA_00847	0.87	+2.1
106,843	-		BACOVA_00847	0.87	+2.1
106,843	-		BACOVA_00847	0.87	-1.1
106,849	+		BACOVA_00847	0.88	+1.4
106,850	-		BACOVA_00847	0.88	-0.3
106,853	-		BACOVA_00847	0.88	-0.2
106,859	-		BACOVA_00847	0.89	-0.4
106,861	-		BACOVA_00847	0.89	-1.2
106,861	-		BACOVA_00847	0.89	-1.0
106,861	-		BACOVA_00847	0.89	-0.5
106,883	+				+0.0
106,884	-				+2.0
106,900	+				+0.6
106,910	-				-0.5
106,929	-				-0.6
106,929	-				-0.0
106,986	+				+0.8
106,991	+				-0.8
106,993	+				+0.8
107,001	-				-0.3
107,008	-				+1.1
107,008	-				-1.7
107,028	+				-0.5
107,039	+				-1.1
107,039	+				-0.6
107,048	+				+1.4
107,071	+				-0.2
107,124	-				+0.1
107,166	-				+0.2
107,188	+				+0.7
107,193	+				-0.9
107,194	-				-0.1
107,194	-				-1.1
107,203	+				+1.5
107,234	+				-0.4
107,235	-				-0.5
107,235	-				-0.2
107,279	+		BACOVA_00848	0.11	+1.1
107,279	+		BACOVA_00848	0.11	+1.0
107,279	+		BACOVA_00848	0.11	-0.2
107,279	+		BACOVA_00848	0.11	+0.0
107,279	+		BACOVA_00848	0.11	+0.3
107,280	-		BACOVA_00848	0.12	-0.7
107,280	-		BACOVA_00848	0.12	-0.1
107,307	+		BACOVA_00848	0.15	-0.9
107,316	-		BACOVA_00848	0.17	-0.0
107,320	+		BACOVA_00848	0.17	+0.2
107,386	-		BACOVA_00848	0.26	-1.8
107,425	+		BACOVA_00848	0.32	-0.4
107,440	-		BACOVA_00848	0.34	+0.7
107,497	+		BACOVA_00848	0.42	+0.4
107,498	-		BACOVA_00848	0.42	+0.3
107,515	+		BACOVA_00848	0.45	-1.2
107,516	-		BACOVA_00848	0.45	+1.3
107,521	+		BACOVA_00848	0.45	+0.7
107,521	+		BACOVA_00848	0.45	+0.8
107,522	-		BACOVA_00848	0.46	+0.7
107,561	-		BACOVA_00848	0.51	-0.2
107,564	+		BACOVA_00848	0.51	-0.2
107,565	-		BACOVA_00848	0.52	+1.1
107,639	+		BACOVA_00848	0.62	+0.7
107,672	+		BACOVA_00848	0.67	+1.9
107,722	+		BACOVA_00848	0.74	-1.3
107,731	-		BACOVA_00848	0.75	+1.4
107,731	-		BACOVA_00848	0.75	+1.2
107,745	+		BACOVA_00848	0.77	+0.4
107,792	+		BACOVA_00848	0.84	+0.1
107,793	-		BACOVA_00848	0.84	-0.2
107,820	+		BACOVA_00848	0.87	-1.0
107,879	+				+0.3
107,879	+				+0.9
107,880	-				-1.1
107,917	+				-0.4
107,918	-				+0.3
107,974	+				-0.8
108,026	+				+2.4
108,026	+				-0.8
108,083	+		BACOVA_00849	0.20	+1.1
108,141	+		BACOVA_00849	0.32	+0.5
108,192	-		BACOVA_00849	0.42	-0.3
108,195	+		BACOVA_00849	0.42	+1.1
108,207	-		BACOVA_00849	0.45	+1.2
108,213	-		BACOVA_00849	0.46	-1.1
108,253	+		BACOVA_00849	0.54	-0.2
108,274	-		BACOVA_00849	0.58	-0.1
108,345	-		BACOVA_00849	0.73	+0.6
108,368	+		BACOVA_00849	0.77	+0.3
108,387	-		BACOVA_00849	0.81	+0.3
108,407	+		BACOVA_00849	0.85	-1.2
108,407	+		BACOVA_00849	0.85	-0.7
108,408	-		BACOVA_00849	0.85	+0.9
108,410	+		BACOVA_00849	0.86	+2.4
108,411	-		BACOVA_00849	0.86	-0.1
108,438	-				-0.3
108,438	-				-0.3
108,439	+				-0.5
108,534	-				-1.3
108,538	-				+0.2
108,562	-				+0.0
108,572	+				-0.8
108,573	-				-0.6
108,588	-				-0.2
108,591	+				-0.1
108,592	-				+0.4
108,594	-				-0.2
108,594	-				+1.0
108,628	+				+0.1
108,652	-				+1.8
108,661	+				+1.7
108,724	-				-0.8
108,724	-				-0.1
108,725	+				-0.6
108,726	+				-0.7
108,726	-				-1.1
108,794	+		BACOVA_00850	0.12	+0.6
108,811	-		BACOVA_00850	0.14	+0.5
108,821	+		BACOVA_00850	0.15	+0.7
108,822	-		BACOVA_00850	0.15	-0.1
108,872	+		BACOVA_00850	0.21	-1.7
108,873	-		BACOVA_00850	0.21	+0.7
108,875	+		BACOVA_00850	0.21	-0.4
108,892	+		BACOVA_00850	0.23	-0.7
108,892	+		BACOVA_00850	0.23	+0.8
108,905	+		BACOVA_00850	0.25	-0.7
108,905	+		BACOVA_00850	0.25	+2.1
108,906	-		BACOVA_00850	0.25	-0.3