Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00382

Experiment: beta-Cyclodextrin 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/mL (C)
5,473	+		BACOVA_00379	0.82	+0.3
5,474	-		BACOVA_00379	0.82	+1.1
5,474	-		BACOVA_00379	0.82	+0.6
5,474	-		BACOVA_00379	0.82	+0.3
5,474	-		BACOVA_00379	0.82	+0.8
5,572	-				+0.9
5,580	+				-2.8
5,597	+				+0.3
5,649	-				-0.1
5,655	-				+0.6
5,655	-				-0.6
5,693	+				+0.0
5,786	-		BACOVA_00380	0.20	-0.7
5,811	+		BACOVA_00380	0.26	-0.3
5,812	-		BACOVA_00380	0.26	+0.2
5,812	-		BACOVA_00380	0.26	+1.5
5,855	+		BACOVA_00380	0.35	-1.2
5,877	-		BACOVA_00380	0.40	-0.4
5,901	+		BACOVA_00380	0.45	-0.2
5,942	-		BACOVA_00380	0.54	+0.5
5,942	-		BACOVA_00380	0.54	-0.7
5,961	+		BACOVA_00380	0.58	+0.8
5,961	+		BACOVA_00380	0.58	-0.2
5,961	+		BACOVA_00380	0.58	+1.6
5,962	-		BACOVA_00380	0.58	+0.8
5,964	+		BACOVA_00380	0.58	+1.0
5,972	+		BACOVA_00380	0.60	+0.6
5,973	-		BACOVA_00380	0.60	-1.2
6,022	-		BACOVA_00380	0.71	+1.3
6,022	-		BACOVA_00380	0.71	-1.0
6,078	+		BACOVA_00380	0.83	+0.9
6,088	-		BACOVA_00380	0.85	+0.1
6,104	+		BACOVA_00380	0.89	-0.8
6,107	-		BACOVA_00380	0.89	-0.0
6,107	-		BACOVA_00380	0.89	+0.8
6,133	+				+0.8
6,143	-				-0.4
6,145	+				+0.4
6,168	-				+0.8
6,179	+				-1.2
6,180	-				-2.7
6,181	+				+0.4
6,182	-				+0.8
6,182	-				+0.7
6,195	-				+0.0
6,265	-		BACOVA_00381	0.30	+1.2
6,267	-		BACOVA_00381	0.31	-0.6
6,285	+		BACOVA_00381	0.37	-0.6
6,297	-		BACOVA_00381	0.41	-0.0
6,297	-		BACOVA_00381	0.41	-1.7
6,328	-		BACOVA_00381	0.51	-0.1
6,367	-		BACOVA_00381	0.64	+0.4
6,430	-		BACOVA_00381	0.85	-0.9
6,451	-				-0.7
6,454	-				-0.3
6,530	+		BACOVA_00382	0.67	-1.6
6,538	+		BACOVA_00382	0.74	-0.3
6,540	+		BACOVA_00382	0.75	-1.6
6,574	-				-0.5
6,574	-				-0.2
6,574	-				+0.9
6,582	+				+0.7
6,582	+				+0.5
6,582	+				-0.3
6,626	+				+0.5
6,824	+		BACOVA_00383	0.16	+0.1
6,886	-		BACOVA_00383	0.22	-0.7
6,896	-		BACOVA_00383	0.23	+0.8
6,910	-		BACOVA_00383	0.24	+2.5
6,924	+		BACOVA_00383	0.25	+2.1
6,924	+		BACOVA_00383	0.25	-0.1
6,924	+		BACOVA_00383	0.25	-1.4
6,925	-		BACOVA_00383	0.25	-0.8
6,925	-		BACOVA_00383	0.25	+1.5
6,925	-		BACOVA_00383	0.25	+0.1
6,925	-		BACOVA_00383	0.25	+2.0
6,928	-		BACOVA_00383	0.25	+0.1
6,929	+		BACOVA_00383	0.25	-0.1
6,932	-		BACOVA_00383	0.26	-0.3
6,978	+		BACOVA_00383	0.30	-0.9
6,999	-		BACOVA_00383	0.32	+0.8
7,003	-		BACOVA_00383	0.32	+0.3
7,003	-		BACOVA_00383	0.32	-0.3
7,051	-		BACOVA_00383	0.36	-0.6
7,051	-		BACOVA_00383	0.36	+0.5
7,061	-		BACOVA_00383	0.37	+0.1
7,190	+		BACOVA_00383	0.49	+0.6
7,190	+		BACOVA_00383	0.49	+0.5
7,191	-		BACOVA_00383	0.49	-0.2
7,191	-		BACOVA_00383	0.49	+2.5
7,263	+		BACOVA_00383	0.55	+0.7
7,264	-		BACOVA_00383	0.55	+0.2
7,264	-		BACOVA_00383	0.55	+0.9
7,275	+		BACOVA_00383	0.56	+1.1
7,275	+		BACOVA_00383	0.56	-1.7
7,275	+		BACOVA_00383	0.56	-0.3
7,276	-		BACOVA_00383	0.56	-0.9
7,276	-		BACOVA_00383	0.56	-1.2
7,277	+		BACOVA_00383	0.56	-1.0
7,277	+		BACOVA_00383	0.56	-0.7
7,277	+		BACOVA_00383	0.56	-1.1
7,278	-		BACOVA_00383	0.56	+0.1
7,278	-		BACOVA_00383	0.56	+0.1
7,342	+		BACOVA_00383	0.62	-0.4
7,343	-		BACOVA_00383	0.62	-0.4
7,414	+		BACOVA_00383	0.68	+0.6
7,451	+		BACOVA_00383	0.72	+0.4
7,520	-		BACOVA_00383	0.78	+1.1
7,535	+		BACOVA_00383	0.79	-0.3
7,535	+		BACOVA_00383	0.79	-0.5
7,536	-		BACOVA_00383	0.79	+1.2