Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00859

Experiment: Pectin from apple; autoclaved 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple; autoclaved 2.5 mg/mL (C)
113,041	+		BACOVA_00858	0.22	-0.2
113,131	+		BACOVA_00858	0.30	-0.2
113,150	-		BACOVA_00858	0.31	-1.5
113,150	-		BACOVA_00858	0.31	-0.6
113,158	+		BACOVA_00858	0.32	-1.9
113,159	-		BACOVA_00858	0.32	-1.0
113,162	+		BACOVA_00858	0.32	+0.3
113,163	-		BACOVA_00858	0.32	+0.5
113,220	-		BACOVA_00858	0.37	+0.8
113,227	+		BACOVA_00858	0.38	+1.2
113,227	+		BACOVA_00858	0.38	-0.4
113,228	-		BACOVA_00858	0.38	-0.1
113,229	+		BACOVA_00858	0.38	+0.9
113,230	-		BACOVA_00858	0.38	-0.7
113,230	-		BACOVA_00858	0.38	+0.5
113,338	+		BACOVA_00858	0.47	-0.3
113,339	-		BACOVA_00858	0.47	-1.2
113,354	+		BACOVA_00858	0.49	+1.3
113,416	+		BACOVA_00858	0.54	+0.5
113,416	+		BACOVA_00858	0.54	+0.0
113,417	-		BACOVA_00858	0.54	+0.2
113,417	-		BACOVA_00858	0.54	+0.2
113,420	-		BACOVA_00858	0.54	+0.8
113,477	-		BACOVA_00858	0.59	+0.5
113,480	+		BACOVA_00858	0.59	-0.0
113,481	-		BACOVA_00858	0.60	+0.1
113,481	-		BACOVA_00858	0.60	+0.2
113,494	+		BACOVA_00858	0.61	+0.5
113,496	+		BACOVA_00858	0.61	-0.1
113,497	-		BACOVA_00858	0.61	+0.2
113,576	-		BACOVA_00858	0.68	-1.0
113,593	+		BACOVA_00858	0.69	-0.5
113,593	+		BACOVA_00858	0.69	-1.1
113,594	-		BACOVA_00858	0.69	-0.0
113,625	-		BACOVA_00858	0.72	-0.2
113,625	-		BACOVA_00858	0.72	-0.7
113,638	+		BACOVA_00858	0.73	+0.0
113,640	+		BACOVA_00858	0.73	+0.2
113,641	-		BACOVA_00858	0.73	-0.8
113,641	-		BACOVA_00858	0.73	-1.1
113,644	+		BACOVA_00858	0.74	-0.4
113,649	-		BACOVA_00858	0.74	+0.1
113,681	-		BACOVA_00858	0.77	+0.4
113,735	-		BACOVA_00858	0.81	+0.2
113,750	+		BACOVA_00858	0.83	-0.6
113,759	+		BACOVA_00858	0.83	-0.7
113,800	+		BACOVA_00858	0.87	-0.8
113,820	-		BACOVA_00858	0.89	+0.3
113,820	-		BACOVA_00858	0.89	-0.4
113,862	-				+0.2
113,862	-				-0.1
113,862	-				-0.1
113,866	+				-0.2
113,887	+				+0.3
113,888	-				+0.1
113,888	-				+1.4
113,891	-				+0.3
113,915	-				+0.8
113,922	+				+0.5
113,945	+				-0.0
113,946	-				-1.5
113,946	-				+0.1
113,949	+				-0.1
113,950	-				-0.3
113,954	-				-0.2
113,954	-				-1.8
113,956	+				+1.2
113,956	+				-0.1
113,957	-				-0.9
113,970	+				-0.4
113,970	+				+0.6
113,980	+				+0.1
113,981	-				-1.1
114,005	-				+0.1
114,015	+				-2.3
114,015	+				+2.4
114,019	-				+0.6
114,019	-				+0.2
114,023	-				-0.2
114,056	+				-0.2
114,056	+				+0.5
114,056	+				+0.3
114,057	-				+0.7
114,057	-				+0.9
114,062	-				-0.1
114,111	+		BACOVA_00859	0.12	+0.1
114,139	-		BACOVA_00859	0.15	-0.8
114,149	-		BACOVA_00859	0.16	+1.5
114,196	+		BACOVA_00859	0.22	-0.6
114,295	+		BACOVA_00859	0.34	+0.4
114,296	-		BACOVA_00859	0.34	-0.4
114,297	+		BACOVA_00859	0.34	-1.1
114,297	+		BACOVA_00859	0.34	+0.7
114,297	+		BACOVA_00859	0.34	+0.4
114,298	-		BACOVA_00859	0.35	-1.5
114,298	-		BACOVA_00859	0.35	-0.2
114,301	+		BACOVA_00859	0.35	-0.9
114,316	+		BACOVA_00859	0.37	-1.4
114,316	+		BACOVA_00859	0.37	+0.7
114,342	-		BACOVA_00859	0.40	+1.2
114,386	+		BACOVA_00859	0.45	-0.0
114,428	+		BACOVA_00859	0.51	-0.4
114,437	-		BACOVA_00859	0.52	+1.2
114,444	-		BACOVA_00859	0.53	-0.8
114,444	-		BACOVA_00859	0.53	-1.3
114,448	+		BACOVA_00859	0.53	+0.9
114,524	-		BACOVA_00859	0.62	+1.5
114,541	+		BACOVA_00859	0.64	-0.2
114,564	-		BACOVA_00859	0.67	+0.1
114,572	-		BACOVA_00859	0.68	+0.6
114,580	-		BACOVA_00859	0.69	-0.1
114,622	+		BACOVA_00859	0.74	-0.7
114,622	+		BACOVA_00859	0.74	-0.3
114,639	+		BACOVA_00859	0.77	-0.7
114,675	-		BACOVA_00859	0.81	+1.2
114,680	+		BACOVA_00859	0.82	-1.5
114,757	+				+0.4
114,758	-				-0.1
114,764	-				+0.5
114,790	+				-0.1
114,797	+				-1.0
114,818	+				+0.5
114,846	+				-0.1
114,852	+				-0.5
114,852	+				-0.0
114,874	-				+0.1
114,904	+				-0.4
114,967	+		BACOVA_00860	0.11	+1.4
115,040	-		BACOVA_00860	0.18	-0.4
115,101	+		BACOVA_00860	0.23	+0.1
115,136	-		BACOVA_00860	0.27	-0.7
115,148	+		BACOVA_00860	0.28	-1.5
115,148	+		BACOVA_00860	0.28	+0.2
115,148	+		BACOVA_00860	0.28	-0.1
115,193	-		BACOVA_00860	0.32	+0.1
115,195	-		BACOVA_00860	0.32	+0.9
115,297	+		BACOVA_00860	0.42	-0.1
115,337	+		BACOVA_00860	0.45	-0.0
115,338	-		BACOVA_00860	0.45	-0.3
115,399	-		BACOVA_00860	0.51	-0.9
115,416	+		BACOVA_00860	0.53	+0.1
115,455	+		BACOVA_00860	0.56	-0.2
115,456	-		BACOVA_00860	0.56	+0.6
115,456	-		BACOVA_00860	0.56	-0.9
115,456	-		BACOVA_00860	0.56	-0.7
115,461	+		BACOVA_00860	0.57	+0.0
115,462	-		BACOVA_00860	0.57	-2.0
115,462	-		BACOVA_00860	0.57	+0.5
115,462	-		BACOVA_00860	0.57	+0.1
115,462	-		BACOVA_00860	0.57	+0.2
115,466	+		BACOVA_00860	0.57	-0.4
115,467	-		BACOVA_00860	0.57	-1.1
115,467	-		BACOVA_00860	0.57	-0.1
115,532	+		BACOVA_00860	0.63	+1.3
115,570	+		BACOVA_00860	0.67	+1.8
115,591	+		BACOVA_00860	0.69	+1.2
115,591	+		BACOVA_00860	0.69	-0.4
115,592	-		BACOVA_00860	0.69	+0.3
115,594	-		BACOVA_00860	0.69	+0.4
115,594	-		BACOVA_00860	0.69	-0.5
115,659	-		BACOVA_00860	0.75	+0.4
115,659	-		BACOVA_00860	0.75	+0.1
115,659	-		BACOVA_00860	0.75	-0.1
115,661	-		BACOVA_00860	0.75	+0.5
115,684	-		BACOVA_00860	0.78	-0.3
115,708	+		BACOVA_00860	0.80	-0.4
115,725	+		BACOVA_00860	0.81	+0.0
115,726	-		BACOVA_00860	0.81	+0.9
115,726	-		BACOVA_00860	0.81	-1.4
115,778	+		BACOVA_00860	0.86	-0.5
115,778	+		BACOVA_00860	0.86	-0.7
115,778	+		BACOVA_00860	0.86	-1.0
115,779	-		BACOVA_00860	0.86	-0.9
115,779	-		BACOVA_00860	0.86	+0.1
115,823	+				-0.1