Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01759

Experiment: Polygalacturonic 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01757 and BACOVA_01758 overlap by 7 nucleotidesBACOVA_01758 and BACOVA_01759 are separated by 21 nucleotidesBACOVA_01759 and BACOVA_01760 are separated by 3 nucleotidesBACOVA_01760 and BACOVA_01761 are separated by 32 nucleotidesBACOVA_01761 and BACOVA_01762 are separated by 200 nucleotides BACOVA_01757: BACOVA_01757 - putative toxin-antitoxin system, toxin component, at 182,298 to 182,615 _01757 BACOVA_01758: BACOVA_01758 - putative toxin-antitoxin system, antitoxin component, at 182,609 to 183,007 _01758 BACOVA_01759: BACOVA_01759 - hypothetical protein, at 183,029 to 183,286 _01759 BACOVA_01760: BACOVA_01760 - hypothetical protein, at 183,290 to 183,652 _01760 BACOVA_01761: BACOVA_01761 - hypothetical protein, at 183,685 to 183,894 _01761 BACOVA_01762: BACOVA_01762 - hypothetical protein, at 184,095 to 184,865 _01762 Position (kb) 183 184Strain fitness (log2 ratio) -2 -1 0 1 2at 182.036 kb on - strandat 182.040 kb on - strandat 182.048 kb on - strandat 182.075 kb on + strandat 182.107 kb on - strandat 182.107 kb on - strandat 182.108 kb on + strandat 182.109 kb on - strandat 182.130 kb on - strandat 182.146 kb on + strandat 182.147 kb on - strandat 182.150 kb on + strandat 182.150 kb on + strandat 182.151 kb on - strandat 182.151 kb on - strandat 182.187 kb on + strandat 182.212 kb on - strandat 182.243 kb on - strandat 182.278 kb on + strandat 182.281 kb on + strandat 182.285 kb on + strandat 182.339 kb on - strand, within BACOVA_01757at 182.508 kb on - strand, within BACOVA_01757at 182.538 kb on - strand, within BACOVA_01757at 182.578 kb on - strand, within BACOVA_01757at 182.609 kb on - strandat 182.614 kb on - strandat 182.614 kb on - strandat 182.614 kb on - strandat 182.646 kb on - strandat 182.646 kb on - strandat 182.715 kb on + strand, within BACOVA_01758at 182.715 kb on + strand, within BACOVA_01758at 182.725 kb on + strand, within BACOVA_01758at 182.733 kb on - strand, within BACOVA_01758at 182.735 kb on + strand, within BACOVA_01758at 182.735 kb on + strand, within BACOVA_01758at 182.735 kb on + strand, within BACOVA_01758at 182.750 kb on - strand, within BACOVA_01758at 182.773 kb on + strand, within BACOVA_01758at 182.781 kb on + strand, within BACOVA_01758at 182.806 kb on + strand, within BACOVA_01758at 182.806 kb on + strand, within BACOVA_01758at 182.807 kb on - strand, within BACOVA_01758at 182.906 kb on + strand, within BACOVA_01758at 182.906 kb on + strand, within BACOVA_01758at 182.907 kb on - strand, within BACOVA_01758at 182.907 kb on - strand, within BACOVA_01758at 182.907 kb on - strand, within BACOVA_01758at 182.914 kb on + strand, within BACOVA_01758at 182.914 kb on + strand, within BACOVA_01758at 182.914 kb on + strand, within BACOVA_01758at 182.918 kb on + strand, within BACOVA_01758at 182.918 kb on + strand, within BACOVA_01758at 182.918 kb on + strand, within BACOVA_01758at 182.950 kb on + strand, within BACOVA_01758at 183.001 kb on + strandat 183.006 kb on - strandat 183.026 kb on - strandat 183.099 kb on - strand, within BACOVA_01759at 183.185 kb on - strand, within BACOVA_01759at 183.185 kb on - strand, within BACOVA_01759at 183.221 kb on + strand, within BACOVA_01759at 183.222 kb on - strand, within BACOVA_01759at 183.255 kb on - strand, within BACOVA_01759at 183.255 kb on - strand, within BACOVA_01759at 183.404 kb on + strand, within BACOVA_01760at 183.404 kb on + strand, within BACOVA_01760at 183.404 kb on + strand, within BACOVA_01760at 183.449 kb on + strand, within BACOVA_01760at 183.450 kb on - strand, within BACOVA_01760at 183.450 kb on - strand, within BACOVA_01760at 183.454 kb on - strand, within BACOVA_01760at 183.454 kb on - strand, within BACOVA_01760at 183.474 kb on + strand, within BACOVA_01760at 183.502 kb on + strand, within BACOVA_01760at 183.506 kb on + strand, within BACOVA_01760at 183.509 kb on + strand, within BACOVA_01760at 183.509 kb on + strand, within BACOVA_01760at 183.509 kb on + strand, within BACOVA_01760at 183.509 kb on + strand, within BACOVA_01760at 183.510 kb on - strand, within BACOVA_01760at 183.518 kb on - strand, within BACOVA_01760at 183.521 kb on + strand, within BACOVA_01760at 183.542 kb on + strand, within BACOVA_01760at 183.543 kb on - strand, within BACOVA_01760at 183.569 kb on - strand, within BACOVA_01760at 183.592 kb on - strand, within BACOVA_01760at 183.631 kb on + strandat 183.632 kb on - strandat 183.687 kb on - strandat 183.827 kb on - strand, within BACOVA_01761at 183.831 kb on + strand, within BACOVA_01761at 183.832 kb on - strand, within BACOVA_01761at 183.875 kb on - strandat 183.894 kb on + strandat 183.899 kb on + strandat 183.900 kb on - strandat 183.900 kb on - strandat 183.922 kb on + strandat 183.922 kb on + strandat 183.932 kb on - strandat 183.987 kb on - strandat 184.012 kb on + strandat 184.013 kb on - strandat 184.023 kb on - strandat 184.060 kb on + strandat 184.060 kb on + strandat 184.061 kb on - strandat 184.093 kb on + strandat 184.115 kb on + strandat 184.116 kb on - strandat 184.260 kb on + strand, within BACOVA_01762at 184.262 kb on + strand, within BACOVA_01762at 184.262 kb on + strand, within BACOVA_01762at 184.263 kb on - strand, within BACOVA_01762

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Per-strain Table

Position Strand Gene LocusTag Fraction Polygalacturonic 2.5 mg/mL (C)
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182,036 - +2.6
182,040 - -0.9
182,048 - +0.1
182,075 + +0.3
182,107 - -0.6
182,107 - +1.2
182,108 + -0.2
182,109 - -0.2
182,130 - +0.1
182,146 + +0.7
182,147 - -1.1
182,150 + +0.2
182,150 + -0.2
182,151 - -2.6
182,151 - -0.4
182,187 + -0.0
182,212 - -1.3
182,243 - -1.0
182,278 + +0.4
182,281 + -0.8
182,285 + -1.2
182,339 - BACOVA_01757 0.13 -0.3
182,508 - BACOVA_01757 0.66 +0.0
182,538 - BACOVA_01757 0.75 -1.0
182,578 - BACOVA_01757 0.88 -0.8
182,609 - -0.9
182,614 - +0.6
182,614 - +0.5
182,614 - +0.0
182,646 - +1.7
182,646 - -0.9
182,715 + BACOVA_01758 0.27 +0.7
182,715 + BACOVA_01758 0.27 +0.9
182,725 + BACOVA_01758 0.29 +0.0
182,733 - BACOVA_01758 0.31 -1.0
182,735 + BACOVA_01758 0.32 +0.4
182,735 + BACOVA_01758 0.32 -0.1
182,735 + BACOVA_01758 0.32 -0.4
182,750 - BACOVA_01758 0.35 -2.1
182,773 + BACOVA_01758 0.41 -0.1
182,781 + BACOVA_01758 0.43 -1.2
182,806 + BACOVA_01758 0.49 +0.2
182,806 + BACOVA_01758 0.49 -0.6
182,807 - BACOVA_01758 0.50 -0.3
182,906 + BACOVA_01758 0.74 -0.6
182,906 + BACOVA_01758 0.74 -1.1
182,907 - BACOVA_01758 0.75 -0.0
182,907 - BACOVA_01758 0.75 -0.2
182,907 - BACOVA_01758 0.75 -0.0
182,914 + BACOVA_01758 0.76 -0.3
182,914 + BACOVA_01758 0.76 +0.1
182,914 + BACOVA_01758 0.76 +0.5
182,918 + BACOVA_01758 0.77 +1.3
182,918 + BACOVA_01758 0.77 +0.2
182,918 + BACOVA_01758 0.77 +0.5
182,950 + BACOVA_01758 0.85 +0.2
183,001 + +0.0
183,006 - +0.0
183,026 - +0.4
183,099 - BACOVA_01759 0.27 -0.3
183,185 - BACOVA_01759 0.60 +0.1
183,185 - BACOVA_01759 0.60 -0.4
183,221 + BACOVA_01759 0.74 -1.5
183,222 - BACOVA_01759 0.75 -1.6
183,255 - BACOVA_01759 0.88 -0.3
183,255 - BACOVA_01759 0.88 -1.3
183,404 + BACOVA_01760 0.31 +1.7
183,404 + BACOVA_01760 0.31 -0.2
183,404 + BACOVA_01760 0.31 +0.6
183,449 + BACOVA_01760 0.44 +0.7
183,450 - BACOVA_01760 0.44 +0.6
183,450 - BACOVA_01760 0.44 -1.3
183,454 - BACOVA_01760 0.45 -0.8
183,454 - BACOVA_01760 0.45 -1.3
183,474 + BACOVA_01760 0.51 +0.0
183,502 + BACOVA_01760 0.58 -0.4
183,506 + BACOVA_01760 0.60 -0.8
183,509 + BACOVA_01760 0.60 -0.7
183,509 + BACOVA_01760 0.60 +0.5
183,509 + BACOVA_01760 0.60 -0.0
183,509 + BACOVA_01760 0.60 +0.5
183,510 - BACOVA_01760 0.61 +0.0
183,518 - BACOVA_01760 0.63 -0.1
183,521 + BACOVA_01760 0.64 +0.6
183,542 + BACOVA_01760 0.69 +0.4
183,543 - BACOVA_01760 0.70 -0.9
183,569 - BACOVA_01760 0.77 +0.7
183,592 - BACOVA_01760 0.83 +0.9
183,631 + -0.5
183,632 - +1.4
183,687 - -1.3
183,827 - BACOVA_01761 0.68 +0.7
183,831 + BACOVA_01761 0.70 +0.8
183,832 - BACOVA_01761 0.70 -0.1
183,875 - -0.4
183,894 + -0.1
183,899 + +1.5
183,900 - -0.8
183,900 - -0.7
183,922 + +0.3
183,922 + +1.0
183,932 - -1.6
183,987 - -1.7
184,012 + +1.2
184,013 - +0.7
184,023 - +1.0
184,060 + +0.6
184,060 + -0.5
184,061 - -0.3
184,093 + -0.3
184,115 + +0.7
184,116 - -0.9
184,260 + BACOVA_01762 0.21 -1.1
184,262 + BACOVA_01762 0.22 +0.9
184,262 + BACOVA_01762 0.22 -0.1
184,263 - BACOVA_01762 0.22 -0.8

Or see this region's nucleotide sequence