Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01432

Experiment: Polygalacturonic 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01431 and BACOVA_01432 are separated by 14 nucleotidesBACOVA_01432 and BACOVA_01433 are separated by 75 nucleotidesBACOVA_01433 and BACOVA_01434 overlap by 4 nucleotides BACOVA_01431: BACOVA_01431 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase, at 89,986 to 91,155 _01431 BACOVA_01432: BACOVA_01432 - peptidase, M23 family, at 91,170 to 92,030 _01432 BACOVA_01433: BACOVA_01433 - 16S rRNA processing protein RimM, at 92,106 to 92,648 _01433 BACOVA_01434: BACOVA_01434 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 92,645 to 93,949 _01434 Position (kb) 91 92 93Strain fitness (log2 ratio) -1 0 1at 91.359 kb on - strand, within BACOVA_01432at 91.397 kb on - strand, within BACOVA_01432at 91.397 kb on - strand, within BACOVA_01432at 91.397 kb on - strand, within BACOVA_01432at 91.509 kb on - strand, within BACOVA_01432at 91.509 kb on - strand, within BACOVA_01432at 91.977 kb on - strandat 92.065 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Polygalacturonic 2.5 mg/mL (C)
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91,359 - BACOVA_01432 0.22 -1.2
91,397 - BACOVA_01432 0.26 +0.5
91,397 - BACOVA_01432 0.26 -0.4
91,397 - BACOVA_01432 0.26 -1.7
91,509 - BACOVA_01432 0.39 -1.4
91,509 - BACOVA_01432 0.39 +0.1
91,977 - -0.2
92,065 - -0.2

Or see this region's nucleotide sequence