Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04437

Experiment: Pectic galactan from potato 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04436 and BACOVA_04437 are separated by 433 nucleotidesBACOVA_04437 and BACOVA_04438 are separated by 80 nucleotides BACOVA_04436: BACOVA_04436 - fructose-1,6-bisphosphate aldolase, class II, at 352,468 to 353,472 _04436 BACOVA_04437: BACOVA_04437 - ribosomal protein L31, at 353,906 to 354,160 _04437 BACOVA_04438: BACOVA_04438 - hypothetical protein, at 354,241 to 355,455 _04438 Position (kb) 353 354 355Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 353.509 kb on - strandat 353.509 kb on - strandat 353.519 kb on - strandat 353.519 kb on - strandat 353.617 kb on + strandat 353.618 kb on - strandat 353.653 kb on - strandat 353.688 kb on - strandat 353.690 kb on - strandat 353.690 kb on - strandat 353.701 kb on + strandat 353.702 kb on - strandat 353.702 kb on - strandat 353.703 kb on + strandat 353.708 kb on + strandat 353.709 kb on - strandat 353.712 kb on + strandat 353.712 kb on + strandat 353.752 kb on + strandat 353.854 kb on + strandat 354.158 kb on + strandat 354.227 kb on + strandat 354.228 kb on - strandat 354.228 kb on - strandat 354.325 kb on + strandat 354.325 kb on + strandat 354.325 kb on + strandat 354.325 kb on + strandat 354.329 kb on + strandat 354.329 kb on + strandat 354.330 kb on - strandat 354.330 kb on - strandat 354.330 kb on - strandat 354.404 kb on + strand, within BACOVA_04438at 354.404 kb on + strand, within BACOVA_04438at 354.405 kb on - strand, within BACOVA_04438at 354.409 kb on + strand, within BACOVA_04438at 354.419 kb on + strand, within BACOVA_04438at 354.479 kb on - strand, within BACOVA_04438at 354.482 kb on + strand, within BACOVA_04438at 354.483 kb on - strand, within BACOVA_04438at 354.483 kb on - strand, within BACOVA_04438at 354.491 kb on + strand, within BACOVA_04438at 354.534 kb on + strand, within BACOVA_04438at 354.637 kb on - strand, within BACOVA_04438at 354.638 kb on + strand, within BACOVA_04438at 354.651 kb on + strand, within BACOVA_04438at 354.663 kb on + strand, within BACOVA_04438at 354.664 kb on - strand, within BACOVA_04438at 354.689 kb on + strand, within BACOVA_04438at 354.690 kb on - strand, within BACOVA_04438at 354.693 kb on + strand, within BACOVA_04438at 354.694 kb on - strand, within BACOVA_04438at 354.694 kb on - strand, within BACOVA_04438at 354.695 kb on + strand, within BACOVA_04438at 354.696 kb on - strand, within BACOVA_04438at 354.696 kb on - strand, within BACOVA_04438at 354.696 kb on - strand, within BACOVA_04438at 354.696 kb on - strand, within BACOVA_04438at 354.709 kb on - strand, within BACOVA_04438at 354.738 kb on - strand, within BACOVA_04438at 354.738 kb on - strand, within BACOVA_04438at 354.765 kb on + strand, within BACOVA_04438at 354.772 kb on + strand, within BACOVA_04438at 354.773 kb on - strand, within BACOVA_04438at 354.773 kb on - strand, within BACOVA_04438at 354.774 kb on + strand, within BACOVA_04438at 354.775 kb on - strand, within BACOVA_04438at 354.866 kb on + strand, within BACOVA_04438at 354.867 kb on - strand, within BACOVA_04438at 354.885 kb on + strand, within BACOVA_04438at 354.886 kb on - strand, within BACOVA_04438at 354.887 kb on + strand, within BACOVA_04438at 354.915 kb on + strand, within BACOVA_04438at 354.915 kb on + strand, within BACOVA_04438at 354.916 kb on - strand, within BACOVA_04438at 354.919 kb on + strand, within BACOVA_04438at 354.919 kb on + strand, within BACOVA_04438at 354.919 kb on + strand, within BACOVA_04438at 354.947 kb on + strand, within BACOVA_04438at 354.947 kb on + strand, within BACOVA_04438at 355.014 kb on - strand, within BACOVA_04438at 355.014 kb on - strand, within BACOVA_04438at 355.053 kb on - strand, within BACOVA_04438at 355.092 kb on + strand, within BACOVA_04438at 355.115 kb on + strand, within BACOVA_04438at 355.115 kb on + strand, within BACOVA_04438at 355.116 kb on - strand, within BACOVA_04438at 355.120 kb on - strand, within BACOVA_04438

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Per-strain Table

Position Strand Gene LocusTag Fraction Pectic galactan from potato 2.5 mg/mL (C)
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353,509 - -2.9
353,509 - -0.8
353,519 - -0.9
353,519 - -0.1
353,617 + +0.7
353,618 - -1.4
353,653 - -0.5
353,688 - -0.9
353,690 - -2.1
353,690 - +0.9
353,701 + -0.0
353,702 - -0.2
353,702 - +0.0
353,703 + -0.9
353,708 + -0.4
353,709 - -0.2
353,712 + +0.7
353,712 + +0.4
353,752 + -0.1
353,854 + -0.1
354,158 + +0.5
354,227 + -1.5
354,228 - +0.1
354,228 - +1.7
354,325 + -0.3
354,325 + -2.2
354,325 + -0.1
354,325 + +0.4
354,329 + -0.1
354,329 + +0.3
354,330 - -0.3
354,330 - +0.8
354,330 - +0.3
354,404 + BACOVA_04438 0.13 -0.3
354,404 + BACOVA_04438 0.13 -1.7
354,405 - BACOVA_04438 0.13 +2.0
354,409 + BACOVA_04438 0.14 -1.3
354,419 + BACOVA_04438 0.15 +0.3
354,479 - BACOVA_04438 0.20 +0.1
354,482 + BACOVA_04438 0.20 -0.6
354,483 - BACOVA_04438 0.20 -1.3
354,483 - BACOVA_04438 0.20 +0.3
354,491 + BACOVA_04438 0.21 -0.0
354,534 + BACOVA_04438 0.24 -0.9
354,637 - BACOVA_04438 0.33 +0.0
354,638 + BACOVA_04438 0.33 -0.8
354,651 + BACOVA_04438 0.34 -0.5
354,663 + BACOVA_04438 0.35 +0.3
354,664 - BACOVA_04438 0.35 +0.1
354,689 + BACOVA_04438 0.37 -0.1
354,690 - BACOVA_04438 0.37 +0.6
354,693 + BACOVA_04438 0.37 -0.4
354,694 - BACOVA_04438 0.37 -1.5
354,694 - BACOVA_04438 0.37 -0.9
354,695 + BACOVA_04438 0.37 -0.6
354,696 - BACOVA_04438 0.37 +0.5
354,696 - BACOVA_04438 0.37 +0.1
354,696 - BACOVA_04438 0.37 -0.3
354,696 - BACOVA_04438 0.37 -1.8
354,709 - BACOVA_04438 0.39 -0.1
354,738 - BACOVA_04438 0.41 +0.6
354,738 - BACOVA_04438 0.41 -0.5
354,765 + BACOVA_04438 0.43 -0.1
354,772 + BACOVA_04438 0.44 -1.2
354,773 - BACOVA_04438 0.44 -0.6
354,773 - BACOVA_04438 0.44 -0.8
354,774 + BACOVA_04438 0.44 -2.2
354,775 - BACOVA_04438 0.44 -0.7
354,866 + BACOVA_04438 0.51 +0.8
354,867 - BACOVA_04438 0.52 +0.9
354,885 + BACOVA_04438 0.53 -1.2
354,886 - BACOVA_04438 0.53 -0.1
354,887 + BACOVA_04438 0.53 +0.8
354,915 + BACOVA_04438 0.55 -1.4
354,915 + BACOVA_04438 0.55 -1.8
354,916 - BACOVA_04438 0.56 -0.2
354,919 + BACOVA_04438 0.56 +0.1
354,919 + BACOVA_04438 0.56 +0.9
354,919 + BACOVA_04438 0.56 +0.5
354,947 + BACOVA_04438 0.58 -1.4
354,947 + BACOVA_04438 0.58 +0.5
355,014 - BACOVA_04438 0.64 -0.2
355,014 - BACOVA_04438 0.64 -0.4
355,053 - BACOVA_04438 0.67 -0.4
355,092 + BACOVA_04438 0.70 -0.4
355,115 + BACOVA_04438 0.72 -2.0
355,115 + BACOVA_04438 0.72 +1.2
355,116 - BACOVA_04438 0.72 -0.7
355,120 - BACOVA_04438 0.72 +0.1

Or see this region's nucleotide sequence