Experiment: b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00761 and BACOVA_00762 are separated by 50 nucleotides BACOVA_00762 and BACOVA_00763 overlap by 30 nucleotides BACOVA_00763 and BACOVA_00764 are separated by 13 nucleotides
BACOVA_00761: BACOVA_00761 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 439,819 to 443,805
_00761
BACOVA_00762: BACOVA_00762 - hypothetical protein, at 443,856 to 443,966
_00762
BACOVA_00763: BACOVA_00763 - hypothetical protein, at 443,937 to 444,449
_00763
BACOVA_00764: BACOVA_00764 - TonB-dependent receptor, at 444,463 to 446,295
_00764
Position (kb) 443
444 Strain fitness (log2 ratio) -2
-1
0
1 at 442.887 kb on + strand, within BACOVA_00761 at 442.888 kb on - strand, within BACOVA_00761 at 442.989 kb on - strand, within BACOVA_00761 at 443.040 kb on - strand, within BACOVA_00761 at 443.047 kb on + strand, within BACOVA_00761 at 443.048 kb on - strand, within BACOVA_00761 at 443.048 kb on - strand, within BACOVA_00761 at 443.048 kb on - strand, within BACOVA_00761 at 443.070 kb on + strand, within BACOVA_00761 at 443.071 kb on - strand, within BACOVA_00761 at 443.072 kb on + strand, within BACOVA_00761 at 443.073 kb on - strand, within BACOVA_00761 at 443.073 kb on - strand, within BACOVA_00761 at 443.076 kb on + strand, within BACOVA_00761 at 443.076 kb on + strand, within BACOVA_00761 at 443.082 kb on - strand, within BACOVA_00761 at 443.116 kb on - strand, within BACOVA_00761 at 443.128 kb on + strand, within BACOVA_00761 at 443.340 kb on + strand, within BACOVA_00761 at 443.346 kb on + strand, within BACOVA_00761 at 443.383 kb on + strand, within BACOVA_00761 at 443.383 kb on + strand, within BACOVA_00761 at 443.436 kb on + strand at 443.436 kb on + strand at 443.459 kb on + strand at 443.468 kb on + strand at 443.468 kb on + strand at 443.557 kb on + strand at 443.653 kb on + strand at 443.731 kb on - strand at 443.755 kb on - strand at 443.821 kb on + strand at 443.825 kb on + strand at 443.832 kb on + strand at 443.833 kb on - strand at 443.856 kb on - strand at 443.865 kb on + strand at 443.865 kb on + strand at 443.865 kb on + strand at 443.865 kb on + strand at 443.866 kb on - strand at 443.866 kb on - strand at 443.866 kb on - strand at 443.898 kb on - strand, within BACOVA_00762 at 443.929 kb on + strand, within BACOVA_00762 at 443.953 kb on + strand at 443.965 kb on - strand at 443.968 kb on + strand at 443.969 kb on - strand at 443.980 kb on - strand at 444.043 kb on - strand, within BACOVA_00763 at 444.043 kb on - strand, within BACOVA_00763 at 444.044 kb on + strand, within BACOVA_00763 at 444.046 kb on + strand, within BACOVA_00763 at 444.047 kb on - strand, within BACOVA_00763 at 444.047 kb on - strand, within BACOVA_00763 at 444.047 kb on - strand, within BACOVA_00763 at 444.080 kb on - strand, within BACOVA_00763 at 444.080 kb on - strand, within BACOVA_00763 at 444.083 kb on + strand, within BACOVA_00763 at 444.084 kb on - strand, within BACOVA_00763 at 444.162 kb on + strand, within BACOVA_00763 at 444.171 kb on + strand, within BACOVA_00763 at 444.271 kb on + strand, within BACOVA_00763 at 444.275 kb on + strand, within BACOVA_00763 at 444.275 kb on + strand, within BACOVA_00763 at 444.276 kb on - strand, within BACOVA_00763 at 444.302 kb on - strand, within BACOVA_00763 at 444.305 kb on + strand, within BACOVA_00763 at 444.305 kb on + strand, within BACOVA_00763 at 444.432 kb on + strand at 444.433 kb on - strand at 444.438 kb on - strand at 444.449 kb on + strand at 444.458 kb on - strand at 444.460 kb on + strand at 444.490 kb on - strand at 444.560 kb on - strand at 444.672 kb on - strand, within BACOVA_00764 at 444.676 kb on + strand, within BACOVA_00764 at 444.677 kb on - strand, within BACOVA_00764 at 444.689 kb on - strand, within BACOVA_00764 at 444.691 kb on - strand, within BACOVA_00764 at 444.779 kb on + strand, within BACOVA_00764 at 444.780 kb on - strand, within BACOVA_00764 at 444.815 kb on + strand, within BACOVA_00764 at 444.821 kb on - strand, within BACOVA_00764 at 444.822 kb on + strand, within BACOVA_00764 at 444.848 kb on - strand, within BACOVA_00764 at 444.864 kb on + strand, within BACOVA_00764 at 444.916 kb on - strand, within BACOVA_00764 at 444.917 kb on + strand, within BACOVA_00764 at 444.918 kb on - strand, within BACOVA_00764 at 444.920 kb on + strand, within BACOVA_00764
Per-strain Table
Position Strand Gene LocusTag Fraction b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C) remove 442,887 + BACOVA_00761 0.77 -0.5 442,888 - BACOVA_00761 0.77 +0.1 442,989 - BACOVA_00761 0.80 +0.7 443,040 - BACOVA_00761 0.81 +0.6 443,047 + BACOVA_00761 0.81 +1.1 443,048 - BACOVA_00761 0.81 -1.0 443,048 - BACOVA_00761 0.81 +0.3 443,048 - BACOVA_00761 0.81 +0.1 443,070 + BACOVA_00761 0.82 +1.4 443,071 - BACOVA_00761 0.82 -0.9 443,072 + BACOVA_00761 0.82 -0.0 443,073 - BACOVA_00761 0.82 -2.2 443,073 - BACOVA_00761 0.82 -0.8 443,076 + BACOVA_00761 0.82 +0.5 443,076 + BACOVA_00761 0.82 +0.4 443,082 - BACOVA_00761 0.82 -1.6 443,116 - BACOVA_00761 0.83 -1.4 443,128 + BACOVA_00761 0.83 +0.7 443,340 + BACOVA_00761 0.88 +0.1 443,346 + BACOVA_00761 0.88 +1.3 443,383 + BACOVA_00761 0.89 -1.2 443,383 + BACOVA_00761 0.89 +0.1 443,436 + -1.4 443,436 + -0.7 443,459 + -0.6 443,468 + +0.1 443,468 + -0.7 443,557 + -0.8 443,653 + -0.8 443,731 - +1.5 443,755 - +0.4 443,821 + +0.7 443,825 + +0.5 443,832 + +0.1 443,833 - +1.3 443,856 - -1.1 443,865 + -0.5 443,865 + +0.4 443,865 + -1.1 443,865 + -0.2 443,866 - -1.2 443,866 - +1.1 443,866 - -0.9 443,898 - BACOVA_00762 0.38 -0.7 443,929 + BACOVA_00762 0.66 -0.5 443,953 + +0.6 443,965 - -0.5 443,968 + +0.5 443,969 - -0.3 443,980 - -0.0 444,043 - BACOVA_00763 0.21 -1.0 444,043 - BACOVA_00763 0.21 +0.7 444,044 + BACOVA_00763 0.21 -0.5 444,046 + BACOVA_00763 0.21 +0.8 444,047 - BACOVA_00763 0.21 +0.4 444,047 - BACOVA_00763 0.21 -0.5 444,047 - BACOVA_00763 0.21 -0.7 444,080 - BACOVA_00763 0.28 -1.1 444,080 - BACOVA_00763 0.28 -0.3 444,083 + BACOVA_00763 0.28 +0.4 444,084 - BACOVA_00763 0.29 -0.7 444,162 + BACOVA_00763 0.44 -0.3 444,171 + BACOVA_00763 0.46 +0.1 444,271 + BACOVA_00763 0.65 +0.1 444,275 + BACOVA_00763 0.66 +0.7 444,275 + BACOVA_00763 0.66 -0.0 444,276 - BACOVA_00763 0.66 +0.7 444,302 - BACOVA_00763 0.71 +0.6 444,305 + BACOVA_00763 0.72 +1.1 444,305 + BACOVA_00763 0.72 +0.9 444,432 + +0.3 444,433 - +0.2 444,438 - -0.5 444,449 + +0.7 444,458 - -1.0 444,460 + +0.2 444,490 - -0.3 444,560 - -0.0 444,672 - BACOVA_00764 0.11 -0.2 444,676 + BACOVA_00764 0.12 +0.0 444,677 - BACOVA_00764 0.12 +1.7 444,689 - BACOVA_00764 0.12 -0.9 444,691 - BACOVA_00764 0.12 -0.9 444,779 + BACOVA_00764 0.17 -0.2 444,780 - BACOVA_00764 0.17 -2.2 444,815 + BACOVA_00764 0.19 +0.5 444,821 - BACOVA_00764 0.20 +0.3 444,822 + BACOVA_00764 0.20 -0.6 444,848 - BACOVA_00764 0.21 +0.2 444,864 + BACOVA_00764 0.22 -0.5 444,916 - BACOVA_00764 0.25 -0.5 444,917 + BACOVA_00764 0.25 +1.5 444,918 - BACOVA_00764 0.25 -0.5 444,920 + BACOVA_00764 0.25 +1.1
Or see this region's nucleotide sequence