Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04018

Experiment: lim MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	lim MOI1
4,215,579	+		OHPLBJKB_04017	0.53	-1.0
4,215,579	+		OHPLBJKB_04017	0.53	+0.1
4,215,579	+		OHPLBJKB_04017	0.53	-0.0
4,215,579	+		OHPLBJKB_04017	0.53	+1.2
4,215,579	+		OHPLBJKB_04017	0.53	+0.3
4,215,580	-		OHPLBJKB_04017	0.53	-0.5
4,215,580	-		OHPLBJKB_04017	0.53	-0.5
4,215,580	-		OHPLBJKB_04017	0.53	-0.8
4,215,580	-		OHPLBJKB_04017	0.53	-1.1
4,215,580	-		OHPLBJKB_04017	0.53	+1.1
4,215,580	-		OHPLBJKB_04017	0.53	-0.8
4,215,630	+		OHPLBJKB_04017	0.55	+1.2
4,215,630	+		OHPLBJKB_04017	0.55	+0.3
4,215,645	-		OHPLBJKB_04017	0.56	-0.3
4,215,700	-		OHPLBJKB_04017	0.59	+0.6
4,215,723	+		OHPLBJKB_04017	0.60	+0.1
4,215,723	+		OHPLBJKB_04017	0.60	-0.4
4,215,723	+		OHPLBJKB_04017	0.60	+0.2
4,215,723	+		OHPLBJKB_04017	0.60	+1.6
4,215,724	-		OHPLBJKB_04017	0.60	+0.8
4,215,792	+		OHPLBJKB_04017	0.63	-0.6
4,215,792	+		OHPLBJKB_04017	0.63	-1.0
4,215,792	+		OHPLBJKB_04017	0.63	+0.4
4,215,793	-		OHPLBJKB_04017	0.63	-0.6
4,215,793	-		OHPLBJKB_04017	0.63	+0.0
4,215,796	+		OHPLBJKB_04017	0.63	+0.4
4,215,796	+		OHPLBJKB_04017	0.63	+0.4
4,215,796	+		OHPLBJKB_04017	0.63	-0.4
4,215,796	+		OHPLBJKB_04017	0.63	-0.3
4,215,797	-		OHPLBJKB_04017	0.63	-1.6
4,215,850	+		OHPLBJKB_04017	0.66	-0.8
4,215,851	-		OHPLBJKB_04017	0.66	-0.5
4,215,889	-		OHPLBJKB_04017	0.68	-0.2
4,215,889	-		OHPLBJKB_04017	0.68	-0.5
4,215,893	-		OHPLBJKB_04017	0.68	-0.3
4,215,904	-		OHPLBJKB_04017	0.68	-0.8
4,215,904	-		OHPLBJKB_04017	0.68	-0.1
4,216,014	+		OHPLBJKB_04017	0.74	+0.3
4,216,014	+		OHPLBJKB_04017	0.74	-0.9
4,216,014	+		OHPLBJKB_04017	0.74	-0.7
4,216,014	+		OHPLBJKB_04017	0.74	-0.0
4,216,015	-		OHPLBJKB_04017	0.74	-1.2
4,216,015	-		OHPLBJKB_04017	0.74	-0.8
4,216,035	+		OHPLBJKB_04017	0.75	-0.1
4,216,035	+		OHPLBJKB_04017	0.75	+1.1
4,216,035	+		OHPLBJKB_04017	0.75	-0.5
4,216,035	+		OHPLBJKB_04017	0.75	+0.0
4,216,036	-		OHPLBJKB_04017	0.75	+0.0
4,216,036	-		OHPLBJKB_04017	0.75	+1.0
4,216,111	+		OHPLBJKB_04017	0.78	-0.9
4,216,149	+		OHPLBJKB_04017	0.80	+1.7
4,216,150	-		OHPLBJKB_04017	0.80	-0.4
4,216,216	-		OHPLBJKB_04017	0.83	+0.2
4,216,255	+		OHPLBJKB_04017	0.85	+0.9
4,216,255	+		OHPLBJKB_04017	0.85	-1.4
4,216,261	+		OHPLBJKB_04017	0.85	-0.4
4,216,262	-		OHPLBJKB_04017	0.85	+1.0
4,216,263	+		OHPLBJKB_04017	0.85	+0.4
4,216,263	+		OHPLBJKB_04017	0.85	+0.3
4,216,263	+		OHPLBJKB_04017	0.85	+0.9
4,216,264	-		OHPLBJKB_04017	0.86	-0.0
4,216,264	-		OHPLBJKB_04017	0.86	-1.0
4,216,323	+		OHPLBJKB_04017	0.88	-0.1
4,216,324	-		OHPLBJKB_04017	0.88	+0.1
4,216,371	+				-0.4
4,216,380	+				-0.2
4,216,429	+				-0.8
4,216,448	+				-0.2
4,216,449	-				+0.4
4,216,449	-				-0.5
4,216,457	+				-0.9
4,216,458	-				-0.3
4,216,500	+				-0.3
4,216,526	-				+0.0
4,216,542	-				+1.4
4,216,542	-				+0.6
4,216,546	+				-0.1
4,216,547	-				-0.3
4,216,658	+		OHPLBJKB_04018	0.12	-1.5
4,216,658	+		OHPLBJKB_04018	0.12	-1.5
4,216,658	+		OHPLBJKB_04018	0.12	-0.2
4,216,659	-		OHPLBJKB_04018	0.12	+0.8
4,216,659	-		OHPLBJKB_04018	0.12	+0.3
4,216,659	-		OHPLBJKB_04018	0.12	-1.0
4,216,659	-		OHPLBJKB_04018	0.12	-0.3
4,216,662	+		OHPLBJKB_04018	0.13	+0.5
4,216,663	-		OHPLBJKB_04018	0.13	-1.0
4,216,663	-		OHPLBJKB_04018	0.13	-0.2
4,216,663	-		OHPLBJKB_04018	0.13	-1.5
4,216,663	-		OHPLBJKB_04018	0.13	-0.3
4,216,684	+		OHPLBJKB_04018	0.16	-0.1
4,216,685	-		OHPLBJKB_04018	0.16	+0.4
4,216,755	-		OHPLBJKB_04018	0.25	-0.8
4,216,796	+		OHPLBJKB_04018	0.31	+0.1
4,216,796	+		OHPLBJKB_04018	0.31	-0.4
4,216,797	-		OHPLBJKB_04018	0.31	-0.0
4,216,797	-		OHPLBJKB_04018	0.31	+0.7
4,216,797	-		OHPLBJKB_04018	0.31	+0.5
4,216,848	+		OHPLBJKB_04018	0.38	+1.4
4,216,972	-		OHPLBJKB_04018	0.55	+0.3
4,217,005	+		OHPLBJKB_04018	0.59	-1.0
4,217,176	+		OHPLBJKB_04018	0.83	-0.0
4,217,176	+		OHPLBJKB_04018	0.83	-0.4
4,217,176	+		OHPLBJKB_04018	0.83	+0.4
4,217,177	-		OHPLBJKB_04018	0.83	+0.5
4,217,298	+				-0.3
4,217,299	-				+1.0
4,217,527	+		OHPLBJKB_04019	0.35	+0.1
4,217,532	+		OHPLBJKB_04019	0.36	-0.3
4,217,532	+		OHPLBJKB_04019	0.36	-0.0
4,217,533	-		OHPLBJKB_04019	0.36	-1.0
4,217,601	-		OHPLBJKB_04019	0.47	+0.1
4,217,624	+		OHPLBJKB_04019	0.51	+0.2
4,217,624	+		OHPLBJKB_04019	0.51	-0.5
4,217,749	-		OHPLBJKB_04019	0.70	-0.2
4,217,771	+		OHPLBJKB_04019	0.74	-0.3
4,217,780	+		OHPLBJKB_04019	0.75	+0.1
4,217,780	+		OHPLBJKB_04019	0.75	+0.1
4,217,780	+		OHPLBJKB_04019	0.75	+0.1
4,217,780	+		OHPLBJKB_04019	0.75	-0.2
4,217,781	-		OHPLBJKB_04019	0.75	-0.4
4,217,781	-		OHPLBJKB_04019	0.75	+0.8
4,217,781	-		OHPLBJKB_04019	0.75	-2.3
4,217,781	-		OHPLBJKB_04019	0.75	+0.0
4,217,782	+		OHPLBJKB_04019	0.75	+1.0
4,217,782	+		OHPLBJKB_04019	0.75	+0.1
4,217,782	+		OHPLBJKB_04019	0.75	-0.3
4,217,782	+		OHPLBJKB_04019	0.75	+1.7
4,217,782	+		OHPLBJKB_04019	0.75	-0.2
4,217,782	+		OHPLBJKB_04019	0.75	+0.5
4,217,783	-		OHPLBJKB_04019	0.75	-0.2
4,217,783	-		OHPLBJKB_04019	0.75	+0.4
4,217,783	-		OHPLBJKB_04019	0.75	+0.1
4,217,783	-		OHPLBJKB_04019	0.75	+0.1
4,217,783	-		OHPLBJKB_04019	0.75	-1.0
4,217,783	-		OHPLBJKB_04019	0.75	-0.6
4,217,783	-		OHPLBJKB_04019	0.75	+0.4
4,217,801	+		OHPLBJKB_04019	0.78	-0.1
4,217,801	+		OHPLBJKB_04019	0.78	-0.2
4,217,802	-		OHPLBJKB_04019	0.78	-0.8
4,217,902	-				+0.7
4,217,902	-				-0.5
4,217,904	+				-0.0
4,217,905	-				-2.1
4,217,905	-				-1.5
4,217,963	+				+0.2
4,217,988	+				-1.6
4,217,988	+				+0.8
4,218,000	+				-0.7
4,218,001	-				-1.3
4,218,042	+				+0.0
4,218,042	+				-1.0
4,218,043	-				-1.6
4,218,046	+				-0.5
4,218,046	+				+0.1
4,218,046	+				-0.6
4,218,046	+				-0.4
4,218,046	+				-1.1
4,218,046	+				-0.7
4,218,046	+				+0.7
4,218,046	+				+0.9
4,218,046	+				+0.3
4,218,046	+				-1.0
4,218,046	+				-0.4
4,218,047	-				-0.4
4,218,047	-				-0.0
4,218,047	-				-0.2
4,218,047	-				-0.1
4,218,047	-				-0.2
4,218,047	-				+0.6
4,218,047	-				-0.3
4,218,047	-				+0.1
4,218,047	-				-0.9
4,218,051	+				+0.0
4,218,051	+				+0.1
4,218,052	-				+0.1
4,218,052	-				+1.0
4,218,052	-				+0.3
4,218,052	-				-0.7
4,218,054	+				+0.8
4,218,095	-		OHPLBJKB_04020	0.17	+0.3
4,218,175	+		OHPLBJKB_04020	0.50	+0.3
4,218,263	+		OHPLBJKB_04020	0.86	+1.3