Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04213

Experiment: Xylan from Beechwood 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from Beechwood 2.5 mg/mL (C)
90,376	-				+0.3
90,376	-				+0.2
90,403	+				+2.0
90,487	+				-0.9
90,487	+				+0.2
90,488	-				-1.5
90,497	+				+0.0
90,497	+				+1.0
90,529	+				+2.4
90,529	+				-1.0
90,540	-				+1.6
90,610	+		BACOVA_04212	0.12	+0.3
90,611	-		BACOVA_04212	0.12	-0.0
90,611	-		BACOVA_04212	0.12	-0.1
90,613	-		BACOVA_04212	0.13	-1.8
90,613	-		BACOVA_04212	0.13	+0.2
90,788	+		BACOVA_04212	0.34	+0.3
90,826	+		BACOVA_04212	0.39	+0.9
90,831	-		BACOVA_04212	0.40	-0.3
90,831	-		BACOVA_04212	0.40	-1.0
90,853	+		BACOVA_04212	0.43	-1.6
90,853	+		BACOVA_04212	0.43	-0.0
90,900	+		BACOVA_04212	0.48	-1.5
90,900	+		BACOVA_04212	0.48	-0.2
90,901	-		BACOVA_04212	0.49	+0.3
90,916	+		BACOVA_04212	0.50	+0.5
90,916	+		BACOVA_04212	0.50	-0.7
91,000	+		BACOVA_04212	0.61	-0.3
91,033	+		BACOVA_04212	0.65	-0.6
91,039	-		BACOVA_04212	0.66	+0.3
91,071	+		BACOVA_04212	0.70	-1.4
91,072	-		BACOVA_04212	0.70	-0.9
91,168	+		BACOVA_04212	0.82	+0.4
91,200	-		BACOVA_04212	0.86	+0.6
91,263	+				+0.8
91,263	+				+0.4
91,264	-				+0.0
91,264	-				+0.2
91,294	+				+0.2
91,294	+				+0.6
91,295	-				-1.4
91,295	-				-1.0
91,352	+				-0.4
91,356	+				-0.7
91,363	+				+1.1
91,390	+				-0.5
91,411	-				-2.6
91,428	+				-0.1
91,431	-				-1.0
91,452	+				-1.4
91,470	+				-2.4
91,473	-				-1.0
91,473	-				-0.8
91,473	-				+0.1
91,479	+				+1.5
91,480	-				-0.5
91,483	-				-1.4
91,540	+		BACOVA_04213	0.14	-0.6
91,540	+		BACOVA_04213	0.14	+1.6
91,629	+		BACOVA_04213	0.22	+0.5
91,646	+		BACOVA_04213	0.23	-0.9
91,647	-		BACOVA_04213	0.23	+0.0
91,647	-		BACOVA_04213	0.23	-1.4
91,649	+		BACOVA_04213	0.23	-1.1
91,686	+		BACOVA_04213	0.26	-0.4
91,696	-		BACOVA_04213	0.27	-0.1
91,696	-		BACOVA_04213	0.27	+1.2
91,699	+		BACOVA_04213	0.27	-1.1
91,699	+		BACOVA_04213	0.27	-1.2
91,746	+		BACOVA_04213	0.31	-1.3
91,779	+		BACOVA_04213	0.34	-1.8
91,839	-		BACOVA_04213	0.39	-0.5
91,877	+		BACOVA_04213	0.42	+1.5
91,877	+		BACOVA_04213	0.42	+0.6
91,877	+		BACOVA_04213	0.42	+1.3
91,878	-		BACOVA_04213	0.42	-0.7
91,878	-		BACOVA_04213	0.42	-2.3
91,878	-		BACOVA_04213	0.42	-0.8
91,922	-		BACOVA_04213	0.46	-0.1
91,922	-		BACOVA_04213	0.46	+0.5
91,939	-		BACOVA_04213	0.47	-0.6
91,997	+		BACOVA_04213	0.52	+0.1
92,013	+		BACOVA_04213	0.54	+0.9
92,013	+		BACOVA_04213	0.54	-0.0
92,045	-		BACOVA_04213	0.56	+1.3
92,048	+		BACOVA_04213	0.57	-0.4
92,070	+		BACOVA_04213	0.58	-1.7
92,071	-		BACOVA_04213	0.59	-0.4
92,088	+		BACOVA_04213	0.60	-1.4
92,089	-		BACOVA_04213	0.60	-0.0
92,130	+		BACOVA_04213	0.63	+1.4
92,131	-		BACOVA_04213	0.64	-0.8
92,143	+		BACOVA_04213	0.65	-0.2
92,181	-		BACOVA_04213	0.68	-0.6
92,231	-		BACOVA_04213	0.72	-0.4
92,297	+		BACOVA_04213	0.77	+0.0
92,328	+		BACOVA_04213	0.80	+0.5
92,329	-		BACOVA_04213	0.80	-0.7
92,351	+		BACOVA_04213	0.82	-0.9
92,472	-				+0.4
92,487	+				-1.0
92,488	-				+0.2
92,525	-				-1.7
92,525	-				-0.6
92,566	+				-2.2
92,579	+				-0.4
92,580	-				-0.3
92,601	-				-0.8
92,624	+				-0.2
92,625	-				-1.6
92,645	-				+0.3
92,667	+				-0.3
92,667	+				+0.8
92,667	+				-1.2
92,668	-				+0.3
92,709	+		BACOVA_04214	0.32	+1.3
92,709	+		BACOVA_04214	0.32	+1.6
92,766	-		BACOVA_04214	0.83	+0.6
92,774	-				+0.4
92,774	-				-1.9
92,785	-				+1.1
92,792	+				-0.4
92,795	+				+0.3
92,795	+				+0.2
92,796	-				-0.7
92,799	+				-0.4
92,799	+				+0.4
92,807	-				-1.5
92,807	-				+1.1
92,821	+				+0.1
92,899	+		BACOVA_04215	0.13	+0.4
92,945	+		BACOVA_04215	0.20	+0.5
93,031	+		BACOVA_04215	0.32	+1.3
93,043	+		BACOVA_04215	0.34	+1.0
93,043	+		BACOVA_04215	0.34	-0.4
93,044	-		BACOVA_04215	0.34	-0.2
93,044	-		BACOVA_04215	0.34	-1.1
93,112	+		BACOVA_04215	0.44	-0.7
93,165	+		BACOVA_04215	0.52	+0.2
93,166	-		BACOVA_04215	0.52	-1.2
93,166	-		BACOVA_04215	0.52	+1.4
93,211	+		BACOVA_04215	0.59	+0.3
93,216	-		BACOVA_04215	0.59	-0.5
93,256	+		BACOVA_04215	0.65	+0.5
93,394	+		BACOVA_04215	0.85	-0.3
93,395	-		BACOVA_04215	0.85	-1.0
93,398	-		BACOVA_04215	0.86	-0.5
93,406	-		BACOVA_04215	0.87	+0.9
93,406	-		BACOVA_04215	0.87	-0.3
93,406	-		BACOVA_04215	0.87	-2.0
93,438	+				+0.4
93,441	-				-1.3
93,502	+				-0.1
93,516	+				+1.2
93,520	+				+0.0
93,538	-				+0.2
93,563	-				-0.6