Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02797

Experiment: Xylan from Beechwood 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02796 and BACOVA_02797 overlap by 4 nucleotidesBACOVA_02797 and BACOVA_02798 are separated by 47 nucleotides BACOVA_02796: BACOVA_02796 - arylsulfatase, at 250,803 to 252,470 _02796 BACOVA_02797: BACOVA_02797 - glycosyl hydrolase, family 43, at 252,467 to 253,654 _02797 BACOVA_02798: BACOVA_02798 - arylsulfatase, at 253,702 to 255,255 _02798 Position (kb) 252 253 254Strain fitness (log2 ratio) -2 -1 0 1at 251.490 kb on - strand, within BACOVA_02796at 251.499 kb on - strand, within BACOVA_02796at 251.571 kb on + strand, within BACOVA_02796at 251.571 kb on + strand, within BACOVA_02796at 251.594 kb on + strand, within BACOVA_02796at 251.594 kb on + strand, within BACOVA_02796at 251.594 kb on + strand, within BACOVA_02796at 251.594 kb on + strand, within BACOVA_02796at 251.595 kb on - strand, within BACOVA_02796at 251.595 kb on - strand, within BACOVA_02796at 251.595 kb on - strand, within BACOVA_02796at 251.780 kb on + strand, within BACOVA_02796at 251.783 kb on - strand, within BACOVA_02796at 251.792 kb on + strand, within BACOVA_02796at 251.792 kb on + strand, within BACOVA_02796at 251.793 kb on - strand, within BACOVA_02796at 251.794 kb on + strand, within BACOVA_02796at 251.795 kb on - strand, within BACOVA_02796at 251.798 kb on + strand, within BACOVA_02796at 251.846 kb on - strand, within BACOVA_02796at 251.846 kb on - strand, within BACOVA_02796at 251.846 kb on - strand, within BACOVA_02796at 251.928 kb on - strand, within BACOVA_02796at 251.933 kb on - strand, within BACOVA_02796at 252.032 kb on - strand, within BACOVA_02796at 252.034 kb on + strand, within BACOVA_02796at 252.034 kb on + strand, within BACOVA_02796at 252.075 kb on + strand, within BACOVA_02796at 252.096 kb on - strand, within BACOVA_02796at 252.266 kb on + strand, within BACOVA_02796at 252.280 kb on + strand, within BACOVA_02796at 252.281 kb on - strand, within BACOVA_02796at 252.332 kb on + strandat 252.333 kb on - strandat 252.387 kb on + strandat 252.387 kb on + strandat 252.393 kb on - strandat 252.395 kb on + strandat 252.418 kb on + strandat 252.418 kb on + strandat 252.450 kb on + strandat 252.485 kb on - strandat 252.513 kb on + strandat 252.513 kb on + strandat 252.550 kb on + strandat 252.553 kb on - strandat 252.553 kb on - strandat 252.592 kb on + strand, within BACOVA_02797at 252.593 kb on - strand, within BACOVA_02797at 252.679 kb on - strand, within BACOVA_02797at 252.679 kb on - strand, within BACOVA_02797at 252.715 kb on + strand, within BACOVA_02797at 252.715 kb on + strand, within BACOVA_02797at 252.756 kb on + strand, within BACOVA_02797at 252.756 kb on + strand, within BACOVA_02797at 252.757 kb on - strand, within BACOVA_02797at 252.760 kb on + strand, within BACOVA_02797at 252.760 kb on + strand, within BACOVA_02797at 252.761 kb on - strand, within BACOVA_02797at 252.790 kb on + strand, within BACOVA_02797at 252.791 kb on - strand, within BACOVA_02797at 252.807 kb on + strand, within BACOVA_02797at 252.807 kb on + strand, within BACOVA_02797at 252.807 kb on + strand, within BACOVA_02797at 252.808 kb on - strand, within BACOVA_02797at 252.845 kb on - strand, within BACOVA_02797at 252.847 kb on - strand, within BACOVA_02797at 252.929 kb on - strand, within BACOVA_02797at 252.929 kb on - strand, within BACOVA_02797at 252.929 kb on - strand, within BACOVA_02797at 252.931 kb on - strand, within BACOVA_02797at 252.968 kb on - strand, within BACOVA_02797at 253.018 kb on + strand, within BACOVA_02797at 253.117 kb on + strand, within BACOVA_02797at 253.141 kb on + strand, within BACOVA_02797at 253.216 kb on - strand, within BACOVA_02797at 253.216 kb on - strand, within BACOVA_02797at 253.231 kb on + strand, within BACOVA_02797at 253.231 kb on + strand, within BACOVA_02797at 253.232 kb on - strand, within BACOVA_02797at 253.232 kb on - strand, within BACOVA_02797at 253.233 kb on + strand, within BACOVA_02797at 253.280 kb on + strand, within BACOVA_02797at 253.310 kb on - strand, within BACOVA_02797at 253.388 kb on - strand, within BACOVA_02797at 253.388 kb on - strand, within BACOVA_02797at 253.407 kb on + strand, within BACOVA_02797at 253.408 kb on - strand, within BACOVA_02797at 253.410 kb on + strand, within BACOVA_02797at 253.411 kb on - strand, within BACOVA_02797at 253.411 kb on - strand, within BACOVA_02797at 253.411 kb on - strand, within BACOVA_02797at 253.491 kb on - strand, within BACOVA_02797at 253.491 kb on - strand, within BACOVA_02797at 253.522 kb on - strand, within BACOVA_02797at 253.524 kb on - strand, within BACOVA_02797at 253.524 kb on - strand, within BACOVA_02797at 253.524 kb on - strand, within BACOVA_02797at 253.552 kb on + strandat 253.599 kb on + strandat 253.611 kb on - strandat 253.616 kb on + strandat 253.623 kb on - strandat 253.669 kb on - strandat 253.677 kb on + strandat 253.677 kb on + strandat 253.681 kb on + strandat 253.685 kb on + strandat 253.686 kb on - strandat 253.686 kb on - strandat 253.696 kb on + strandat 253.722 kb on - strandat 253.836 kb on - strandat 253.858 kb on - strand, within BACOVA_02798at 253.888 kb on - strand, within BACOVA_02798at 253.889 kb on + strand, within BACOVA_02798at 254.081 kb on - strand, within BACOVA_02798at 254.142 kb on + strand, within BACOVA_02798at 254.223 kb on + strand, within BACOVA_02798at 254.267 kb on - strand, within BACOVA_02798at 254.325 kb on - strand, within BACOVA_02798at 254.337 kb on - strand, within BACOVA_02798at 254.450 kb on + strand, within BACOVA_02798at 254.450 kb on + strand, within BACOVA_02798at 254.525 kb on + strand, within BACOVA_02798at 254.603 kb on + strand, within BACOVA_02798at 254.604 kb on - strand, within BACOVA_02798at 254.604 kb on - strand, within BACOVA_02798

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Per-strain Table

Position Strand Gene LocusTag Fraction Xylan from Beechwood 2.5 mg/mL (C)
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251,490 - BACOVA_02796 0.41 -0.5
251,499 - BACOVA_02796 0.42 +0.2
251,571 + BACOVA_02796 0.46 -1.2
251,571 + BACOVA_02796 0.46 +1.0
251,594 + BACOVA_02796 0.47 +1.0
251,594 + BACOVA_02796 0.47 +1.0
251,594 + BACOVA_02796 0.47 -0.4
251,594 + BACOVA_02796 0.47 -0.5
251,595 - BACOVA_02796 0.47 +0.1
251,595 - BACOVA_02796 0.47 -0.7
251,595 - BACOVA_02796 0.47 +0.7
251,780 + BACOVA_02796 0.59 +0.6
251,783 - BACOVA_02796 0.59 +0.9
251,792 + BACOVA_02796 0.59 +0.1
251,792 + BACOVA_02796 0.59 +1.7
251,793 - BACOVA_02796 0.59 +1.4
251,794 + BACOVA_02796 0.59 +0.4
251,795 - BACOVA_02796 0.59 -0.4
251,798 + BACOVA_02796 0.60 +0.5
251,846 - BACOVA_02796 0.63 +0.3
251,846 - BACOVA_02796 0.63 +0.9
251,846 - BACOVA_02796 0.63 +0.6
251,928 - BACOVA_02796 0.67 -0.7
251,933 - BACOVA_02796 0.68 -1.1
252,032 - BACOVA_02796 0.74 +0.0
252,034 + BACOVA_02796 0.74 -0.5
252,034 + BACOVA_02796 0.74 -0.1
252,075 + BACOVA_02796 0.76 +0.5
252,096 - BACOVA_02796 0.78 +0.2
252,266 + BACOVA_02796 0.88 +0.3
252,280 + BACOVA_02796 0.89 +0.7
252,281 - BACOVA_02796 0.89 -0.7
252,332 + +0.8
252,333 - +1.2
252,387 + +0.4
252,387 + -0.4
252,393 - -0.3
252,395 + -0.3
252,418 + -0.3
252,418 + +0.1
252,450 + +0.6
252,485 - -0.7
252,513 + -0.6
252,513 + +0.5
252,550 + +0.2
252,553 - +0.1
252,553 - -0.1
252,592 + BACOVA_02797 0.11 -0.1
252,593 - BACOVA_02797 0.11 -0.3
252,679 - BACOVA_02797 0.18 +0.3
252,679 - BACOVA_02797 0.18 -1.0
252,715 + BACOVA_02797 0.21 -1.6
252,715 + BACOVA_02797 0.21 -0.7
252,756 + BACOVA_02797 0.24 -1.2
252,756 + BACOVA_02797 0.24 -0.9
252,757 - BACOVA_02797 0.24 -0.1
252,760 + BACOVA_02797 0.25 +0.1
252,760 + BACOVA_02797 0.25 +0.7
252,761 - BACOVA_02797 0.25 -1.5
252,790 + BACOVA_02797 0.27 -0.0
252,791 - BACOVA_02797 0.27 -0.4
252,807 + BACOVA_02797 0.29 -0.6
252,807 + BACOVA_02797 0.29 -1.3
252,807 + BACOVA_02797 0.29 +0.2
252,808 - BACOVA_02797 0.29 +1.2
252,845 - BACOVA_02797 0.32 +1.4
252,847 - BACOVA_02797 0.32 -0.8
252,929 - BACOVA_02797 0.39 +0.6
252,929 - BACOVA_02797 0.39 -0.9
252,929 - BACOVA_02797 0.39 +0.7
252,931 - BACOVA_02797 0.39 -0.4
252,968 - BACOVA_02797 0.42 -1.8
253,018 + BACOVA_02797 0.46 -1.3
253,117 + BACOVA_02797 0.55 +0.5
253,141 + BACOVA_02797 0.57 +0.3
253,216 - BACOVA_02797 0.63 +0.3
253,216 - BACOVA_02797 0.63 -2.4
253,231 + BACOVA_02797 0.64 -0.1
253,231 + BACOVA_02797 0.64 -0.6
253,232 - BACOVA_02797 0.64 -0.4
253,232 - BACOVA_02797 0.64 +1.0
253,233 + BACOVA_02797 0.64 -1.1
253,280 + BACOVA_02797 0.68 +0.4
253,310 - BACOVA_02797 0.71 -0.8
253,388 - BACOVA_02797 0.78 -0.9
253,388 - BACOVA_02797 0.78 -0.6
253,407 + BACOVA_02797 0.79 -0.7
253,408 - BACOVA_02797 0.79 -0.4
253,410 + BACOVA_02797 0.79 -0.1
253,411 - BACOVA_02797 0.79 +0.6
253,411 - BACOVA_02797 0.79 +0.3
253,411 - BACOVA_02797 0.79 +1.7
253,491 - BACOVA_02797 0.86 -0.3
253,491 - BACOVA_02797 0.86 -2.1
253,522 - BACOVA_02797 0.89 +0.4
253,524 - BACOVA_02797 0.89 -0.5
253,524 - BACOVA_02797 0.89 -0.1
253,524 - BACOVA_02797 0.89 +0.6
253,552 + +0.7
253,599 + -0.4
253,611 - -0.8
253,616 + +0.2
253,623 - -0.4
253,669 - -1.1
253,677 + -0.0
253,677 + -1.0
253,681 + +0.0
253,685 + -1.3
253,686 - +1.4
253,686 - -0.6
253,696 + +0.1
253,722 - -1.5
253,836 - -0.6
253,858 - BACOVA_02798 0.10 -2.0
253,888 - BACOVA_02798 0.12 +0.4
253,889 + BACOVA_02798 0.12 +0.1
254,081 - BACOVA_02798 0.24 -0.6
254,142 + BACOVA_02798 0.28 +1.2
254,223 + BACOVA_02798 0.34 -0.8
254,267 - BACOVA_02798 0.36 -0.7
254,325 - BACOVA_02798 0.40 +0.7
254,337 - BACOVA_02798 0.41 -0.8
254,450 + BACOVA_02798 0.48 +0.1
254,450 + BACOVA_02798 0.48 -1.4
254,525 + BACOVA_02798 0.53 +0.5
254,603 + BACOVA_02798 0.58 -0.7
254,604 - BACOVA_02798 0.58 +0.8
254,604 - BACOVA_02798 0.58 +0.8

Or see this region's nucleotide sequence