Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00253

Experiment: Xylan from Beechwood 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from Beechwood 2.5 mg/mL (C)
35,222	+		BACOVA_00250	0.84	-1.2
35,258	-		BACOVA_00250	0.85	-0.5
35,397	+				-0.1
35,397	+				-1.0
35,398	-				+1.1
35,477	-				+0.7
35,481	+				+0.4
35,481	+				-0.2
35,482	-				-0.1
35,486	-				+0.6
35,489	+				+1.4
35,536	+				-0.1
35,536	+				+0.3
35,537	-				-1.3
35,541	+				-0.7
35,541	+				-0.8
35,542	-				-0.2
35,542	-				-0.4
35,542	-				+0.9
35,567	-				-0.5
35,567	-				+0.3
35,572	+				-0.3
35,594	-				+1.9
35,596	+				+0.6
35,603	+				-1.2
35,631	+				-0.9
35,631	+				-0.8
35,631	+				-0.2
35,661	-				+0.6
35,664	+				-0.2
35,665	-				-0.2
35,711	+				-0.2
35,716	+				+0.3
35,717	-				-0.6
35,721	-				+0.4
35,762	+		BACOVA_00251	0.46	-0.1
35,762	+		BACOVA_00251	0.46	-0.4
35,763	-		BACOVA_00251	0.47	-0.1
35,817	-				-1.6
35,895	-				+1.1
35,924	+				-0.1
35,974	+				-0.5
36,038	+		BACOVA_00252	0.35	-0.1
36,045	+		BACOVA_00252	0.38	+0.1
36,046	-		BACOVA_00252	0.39	+0.2
36,048	+		BACOVA_00252	0.40	-1.0
36,049	-		BACOVA_00252	0.40	-1.7
36,059	+		BACOVA_00252	0.45	+0.9
36,060	-		BACOVA_00252	0.46	-0.5
36,065	-		BACOVA_00252	0.48	+0.3
36,079	+		BACOVA_00252	0.55	-0.7
36,080	-		BACOVA_00252	0.56	+0.2
36,087	+		BACOVA_00252	0.59	-2.0
36,088	-		BACOVA_00252	0.60	-0.4
36,118	+		BACOVA_00252	0.75	-0.8
36,119	-		BACOVA_00252	0.75	-0.5
36,131	-		BACOVA_00252	0.81	-0.3
36,133	+		BACOVA_00252	0.82	-0.5
36,133	+		BACOVA_00252	0.82	+0.7
36,138	+		BACOVA_00252	0.85	-1.0
36,154	-				-0.1
36,182	-				-0.4
36,184	+				+0.3
36,185	-				+0.8
36,190	-				+0.3
36,197	-				+1.7
36,205	-				-0.9
36,215	+				+0.9
36,228	-				+0.9
36,241	-				-0.3
36,245	+				-1.5
36,246	-				-0.3
36,249	-		BACOVA_00253	0.10	-0.8
36,251	+		BACOVA_00253	0.11	+0.9
36,251	+		BACOVA_00253	0.11	+0.7
36,251	+		BACOVA_00253	0.11	+0.2
36,251	+		BACOVA_00253	0.11	+0.0
36,252	-		BACOVA_00253	0.11	-0.5
36,252	-		BACOVA_00253	0.11	-1.1
36,252	-		BACOVA_00253	0.11	-0.2
36,280	-		BACOVA_00253	0.22	-0.6
36,281	+		BACOVA_00253	0.22	+0.9
36,352	+		BACOVA_00253	0.49	-0.6
36,352	+		BACOVA_00253	0.49	-1.4
36,452	+		BACOVA_00253	0.87	-0.9
36,453	-		BACOVA_00253	0.88	-0.4
36,466	+				+0.2
36,466	+				-0.8
36,467	-				+0.9
36,483	+				+0.8
36,494	-				-1.1
36,564	-		BACOVA_00254	0.20	-0.6
36,571	+		BACOVA_00254	0.22	-0.0
36,575	+		BACOVA_00254	0.23	-0.6
36,576	-		BACOVA_00254	0.24	+0.3
36,576	-		BACOVA_00254	0.24	+1.2
36,576	-		BACOVA_00254	0.24	+0.3
36,589	+		BACOVA_00254	0.27	-1.2
36,590	-		BACOVA_00254	0.28	+0.6
36,605	+		BACOVA_00254	0.32	-0.7
36,606	-		BACOVA_00254	0.32	+1.6
36,606	-		BACOVA_00254	0.32	+0.1
36,608	+		BACOVA_00254	0.33	-1.8
36,628	+		BACOVA_00254	0.39	-0.3
36,629	-		BACOVA_00254	0.39	+0.3
36,629	-		BACOVA_00254	0.39	-0.9
36,657	-		BACOVA_00254	0.47	+1.1
36,671	+		BACOVA_00254	0.51	-1.2
36,689	+		BACOVA_00254	0.57	-0.3
36,689	+		BACOVA_00254	0.57	-1.2
36,690	-		BACOVA_00254	0.57	+0.0
36,692	+		BACOVA_00254	0.58	-0.2
36,693	-		BACOVA_00254	0.58	+1.5
36,698	-		BACOVA_00254	0.59	-0.7
36,698	-		BACOVA_00254	0.59	-1.3
36,725	+		BACOVA_00254	0.67	-0.2
36,726	-		BACOVA_00254	0.68	-0.9
36,726	-		BACOVA_00254	0.68	-0.2
36,790	+		BACOVA_00254	0.86	-0.7
36,802	-				+0.6
36,805	+				-1.5
36,806	-				+0.9
36,815	-				+1.5
36,820	-				-0.7
36,820	-				-0.2
36,855	-				+0.4
36,858	+				-1.1
36,865	+				-0.1
36,880	+				-1.0
36,893	+				-2.3
36,904	-				-0.2
36,915	+				-0.0
36,915	+				-0.3
36,918	-				+0.5
36,918	-				-0.3
36,925	+				-2.0
37,057	-				+0.8
37,078	+				-0.1
37,098	+				+2.3
37,098	+				-0.5
37,098	+				-0.6
37,099	-				-0.3
37,104	+				-1.4
37,145	+				+0.4
37,146	-				-0.0
37,153	+				-2.4
37,154	-				-1.2
37,165	+				-1.0
37,166	-				-0.3
37,166	-				-0.4
37,232	+				-0.7
37,249	+				-1.6
37,249	+				-0.9
37,250	-				-1.1
37,294	+				-0.7
37,294	+				+0.3
37,295	-				-0.0
37,295	-				-0.3
37,295	-				+0.9
37,297	-				+0.6
37,297	-				+0.3
37,363	-		BACOVA_00255	0.15	-0.4
37,379	+		BACOVA_00255	0.16	-0.8
37,380	-		BACOVA_00255	0.17	+0.3
37,434	+		BACOVA_00255	0.22	-1.4
37,435	-		BACOVA_00255	0.23	-0.1
37,443	+		BACOVA_00255	0.23	+0.5
37,443	+		BACOVA_00255	0.23	+1.1