Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01022

Experiment: lim MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	lim MOI10
1,055,066	-		OHPLBJKB_01020	0.84	+0.3
1,055,125	-		OHPLBJKB_01020	0.90	-0.5
1,055,143	-				+0.0
1,055,257	-				+1.1
1,055,407	+				+0.1
1,055,408	-				+0.2
1,055,408	-				-0.5
1,055,414	-				-0.1
1,055,414	-				-0.0
1,055,414	-				-0.5
1,055,506	+		OHPLBJKB_01021	0.24	-1.0
1,055,518	+		OHPLBJKB_01021	0.27	-0.8
1,055,519	-		OHPLBJKB_01021	0.27	+0.4
1,055,599	+		OHPLBJKB_01021	0.42	-0.6
1,055,700	+		OHPLBJKB_01021	0.61	-2.0
1,055,700	+		OHPLBJKB_01021	0.61	-1.0
1,055,700	+		OHPLBJKB_01021	0.61	+0.4
1,055,701	-		OHPLBJKB_01021	0.61	+0.7
1,055,739	+		OHPLBJKB_01021	0.68	+1.0
1,055,740	-		OHPLBJKB_01021	0.69	-0.1
1,055,765	-		OHPLBJKB_01021	0.73	+0.4
1,055,807	-		OHPLBJKB_01021	0.81	+0.1
1,055,904	-				-0.3
1,055,912	+				-0.4
1,055,949	+				+0.3
1,055,949	+				-0.5
1,055,950	-				-1.3
1,055,950	-				+0.7
1,055,956	-				-0.0
1,055,956	-				+0.3
1,055,960	+				-0.2
1,056,051	+				+1.2
1,056,052	-				+2.2
1,056,093	+				-0.4
1,056,093	+				-0.0
1,056,155	+				-0.2
1,056,155	+				+0.9
1,056,155	+				-0.8
1,056,155	+				+0.2
1,056,156	-				-0.6
1,056,156	-				-0.5
1,056,156	-				-1.2
1,056,178	-				+0.6
1,056,178	-				+0.6
1,056,178	-				+0.2
1,056,294	+		OHPLBJKB_01022	0.10	-0.6
1,056,295	-		OHPLBJKB_01022	0.11	-0.5
1,056,295	-		OHPLBJKB_01022	0.11	+0.2
1,056,450	+		OHPLBJKB_01022	0.17	+0.6
1,056,547	-		OHPLBJKB_01022	0.22	+0.9
1,056,630	-		OHPLBJKB_01022	0.25	+0.2
1,056,666	-		OHPLBJKB_01022	0.27	-0.5
1,056,676	-		OHPLBJKB_01022	0.27	-0.2
1,056,676	-		OHPLBJKB_01022	0.27	-0.6
1,056,750	+		OHPLBJKB_01022	0.31	-0.0
1,056,750	+		OHPLBJKB_01022	0.31	+0.5
1,056,750	+		OHPLBJKB_01022	0.31	-1.2
1,056,751	-		OHPLBJKB_01022	0.31	-0.1
1,056,751	-		OHPLBJKB_01022	0.31	+0.4
1,056,751	-		OHPLBJKB_01022	0.31	-0.3
1,056,756	+		OHPLBJKB_01022	0.31	-1.2
1,056,813	+		OHPLBJKB_01022	0.34	+0.0
1,056,861	+		OHPLBJKB_01022	0.36	+0.5
1,056,901	+		OHPLBJKB_01022	0.37	+0.9
1,056,901	+		OHPLBJKB_01022	0.37	-0.1
1,056,901	+		OHPLBJKB_01022	0.37	-1.0
1,056,902	-		OHPLBJKB_01022	0.37	-1.6
1,056,925	-		OHPLBJKB_01022	0.38	+0.7
1,056,989	+		OHPLBJKB_01022	0.41	-0.3
1,057,106	+		OHPLBJKB_01022	0.47	+0.5
1,057,106	+		OHPLBJKB_01022	0.47	-1.6
1,057,107	-		OHPLBJKB_01022	0.47	-0.1
1,057,107	-		OHPLBJKB_01022	0.47	+0.8
1,057,107	-		OHPLBJKB_01022	0.47	-0.4
1,057,107	-		OHPLBJKB_01022	0.47	+0.2
1,057,110	+		OHPLBJKB_01022	0.47	-0.3
1,057,110	+		OHPLBJKB_01022	0.47	+0.2
1,057,110	+		OHPLBJKB_01022	0.47	-0.2
1,057,111	-		OHPLBJKB_01022	0.47	+0.2
1,057,111	-		OHPLBJKB_01022	0.47	+0.1
1,057,111	-		OHPLBJKB_01022	0.47	+0.4
1,057,111	-		OHPLBJKB_01022	0.47	+0.7
1,057,186	+		OHPLBJKB_01022	0.50	-1.2
1,057,186	+		OHPLBJKB_01022	0.50	+0.0
1,057,186	+		OHPLBJKB_01022	0.50	+1.0
1,057,186	+		OHPLBJKB_01022	0.50	+1.1
1,057,187	-		OHPLBJKB_01022	0.50	+0.7
1,057,187	-		OHPLBJKB_01022	0.50	+0.9
1,057,187	-		OHPLBJKB_01022	0.50	+0.2
1,057,187	-		OHPLBJKB_01022	0.50	+0.7
1,057,187	-		OHPLBJKB_01022	0.50	-0.3
1,057,187	-		OHPLBJKB_01022	0.50	+0.4
1,057,322	+		OHPLBJKB_01022	0.56	+1.3
1,057,323	-		OHPLBJKB_01022	0.56	+0.1
1,057,399	+		OHPLBJKB_01022	0.60	+0.5
1,057,399	+		OHPLBJKB_01022	0.60	-0.7
1,057,399	+		OHPLBJKB_01022	0.60	+0.4
1,057,399	+		OHPLBJKB_01022	0.60	-0.3
1,057,400	-		OHPLBJKB_01022	0.60	-0.7
1,057,400	-		OHPLBJKB_01022	0.60	+1.0
1,057,427	-		OHPLBJKB_01022	0.61	-1.8
1,057,427	-		OHPLBJKB_01022	0.61	-1.3
1,057,622	-		OHPLBJKB_01022	0.69	+0.5
1,057,622	-		OHPLBJKB_01022	0.69	+1.0
1,057,747	+		OHPLBJKB_01022	0.75	+0.0
1,057,747	+		OHPLBJKB_01022	0.75	-0.9
1,057,748	-		OHPLBJKB_01022	0.75	-0.1
1,057,815	+		OHPLBJKB_01022	0.78	+0.2
1,057,892	+		OHPLBJKB_01022	0.81	-0.7
1,057,892	+		OHPLBJKB_01022	0.81	-0.6
1,057,893	-		OHPLBJKB_01022	0.81	+1.3
1,057,893	-		OHPLBJKB_01022	0.81	-1.0
1,057,897	+		OHPLBJKB_01022	0.82	+0.6
1,058,135	+				+0.2
1,058,135	+				-0.4
1,058,136	-				+0.1
1,058,136	-				+0.2
1,058,139	+				+0.2
1,058,157	+				+0.2
1,058,188	+				+0.8
1,058,366	+				+0.4
1,058,366	+				-0.7
1,058,366	+				+0.2
1,058,391	+				+0.3
1,058,422	-				+0.3
1,058,430	+				+1.2
1,058,431	-				+0.1
1,058,439	+				+0.2
1,058,439	+				-0.6
1,058,439	+				+0.1
1,058,440	-				-0.1
1,058,440	-				-0.1
1,058,440	-				+0.2
1,058,440	-				-0.9
1,058,560	+		OHPLBJKB_01023	0.11	+0.6
1,058,560	+		OHPLBJKB_01023	0.11	-0.2
1,058,561	-		OHPLBJKB_01023	0.11	+0.2
1,058,561	-		OHPLBJKB_01023	0.11	+0.3
1,058,573	+		OHPLBJKB_01023	0.12	+0.3
1,058,573	+		OHPLBJKB_01023	0.12	+0.9
1,058,574	-		OHPLBJKB_01023	0.12	+0.5
1,058,574	-		OHPLBJKB_01023	0.12	+1.9
1,058,574	-		OHPLBJKB_01023	0.12	+2.5
1,058,612	+		OHPLBJKB_01023	0.15	+0.4
1,058,612	+		OHPLBJKB_01023	0.15	-2.2
1,058,612	+		OHPLBJKB_01023	0.15	-0.1
1,058,613	-		OHPLBJKB_01023	0.15	+0.4
1,058,665	+		OHPLBJKB_01023	0.20	+0.5
1,058,666	-		OHPLBJKB_01023	0.20	+0.2
1,058,666	-		OHPLBJKB_01023	0.20	+0.4
1,058,702	-		OHPLBJKB_01023	0.23	-0.9
1,058,702	-		OHPLBJKB_01023	0.23	+0.2
1,058,729	+		OHPLBJKB_01023	0.26	-0.2
1,058,730	-		OHPLBJKB_01023	0.26	+0.1
1,058,730	-		OHPLBJKB_01023	0.26	+0.5
1,058,766	+		OHPLBJKB_01023	0.29	+0.3
1,058,767	-		OHPLBJKB_01023	0.29	-0.1
1,058,776	+		OHPLBJKB_01023	0.30	-0.5
1,058,777	-		OHPLBJKB_01023	0.30	+1.3
1,058,777	-		OHPLBJKB_01023	0.30	-2.6
1,058,779	+		OHPLBJKB_01023	0.30	+0.2
1,058,780	-		OHPLBJKB_01023	0.30	-0.2
1,058,793	+		OHPLBJKB_01023	0.31	-0.8
1,058,793	+		OHPLBJKB_01023	0.31	-0.9
1,058,794	-		OHPLBJKB_01023	0.31	+0.5
1,058,794	-		OHPLBJKB_01023	0.31	-0.7
1,058,794	-		OHPLBJKB_01023	0.31	+0.5
1,058,794	-		OHPLBJKB_01023	0.31	+0.5
1,058,794	-		OHPLBJKB_01023	0.31	-0.2
1,058,797	+		OHPLBJKB_01023	0.32	-0.2
1,058,798	-		OHPLBJKB_01023	0.32	-0.1
1,058,798	-		OHPLBJKB_01023	0.32	+0.2
1,058,879	+		OHPLBJKB_01023	0.39	-0.4
1,058,954	+		OHPLBJKB_01023	0.46	+0.2
1,058,954	+		OHPLBJKB_01023	0.46	-0.3
1,059,017	+		OHPLBJKB_01023	0.51	-0.0
1,059,017	+		OHPLBJKB_01023	0.51	-0.5
1,059,018	-		OHPLBJKB_01023	0.51	+0.2
1,059,018	-		OHPLBJKB_01023	0.51	-0.2
1,059,046	+		OHPLBJKB_01023	0.54	-0.0
1,059,046	+		OHPLBJKB_01023	0.54	-2.0
1,059,047	-		OHPLBJKB_01023	0.54	-0.3
1,059,047	-		OHPLBJKB_01023	0.54	+0.1
1,059,181	-		OHPLBJKB_01023	0.66	+0.4
1,059,193	+		OHPLBJKB_01023	0.67	+0.4
1,059,193	+		OHPLBJKB_01023	0.67	+0.6
1,059,194	-		OHPLBJKB_01023	0.67	-0.1
1,059,197	+		OHPLBJKB_01023	0.67	+0.8
1,059,197	+		OHPLBJKB_01023	0.67	-0.8
1,059,198	-		OHPLBJKB_01023	0.67	+0.1
1,059,198	-		OHPLBJKB_01023	0.67	+0.6
1,059,209	+		OHPLBJKB_01023	0.68	+0.6
1,059,209	+		OHPLBJKB_01023	0.68	-0.3
1,059,209	+		OHPLBJKB_01023	0.68	-0.6
1,059,209	+		OHPLBJKB_01023	0.68	+0.7
1,059,210	-		OHPLBJKB_01023	0.68	-0.2
1,059,210	-		OHPLBJKB_01023	0.68	-0.1
1,059,210	-		OHPLBJKB_01023	0.68	-0.9
1,059,210	-		OHPLBJKB_01023	0.68	+0.5
1,059,210	-		OHPLBJKB_01023	0.68	+0.4
1,059,210	-		OHPLBJKB_01023	0.68	-0.1
1,059,261	-		OHPLBJKB_01023	0.73	+0.2
1,059,263	+		OHPLBJKB_01023	0.73	+1.3
1,059,263	+		OHPLBJKB_01023	0.73	-0.0
1,059,263	+		OHPLBJKB_01023	0.73	+0.1
1,059,263	+		OHPLBJKB_01023	0.73	+0.1
1,059,263	+		OHPLBJKB_01023	0.73	+0.2
1,059,263	+		OHPLBJKB_01023	0.73	-0.8
1,059,263	+		OHPLBJKB_01023	0.73	-0.3
1,059,264	-		OHPLBJKB_01023	0.73	+1.0
1,059,264	-		OHPLBJKB_01023	0.73	+0.4
1,059,264	-		OHPLBJKB_01023	0.73	+0.1
1,059,264	-		OHPLBJKB_01023	0.73	+0.6
1,059,264	-		OHPLBJKB_01023	0.73	+0.8
1,059,264	-		OHPLBJKB_01023	0.73	+0.5
1,059,264	-		OHPLBJKB_01023	0.73	-0.7
1,059,273	+		OHPLBJKB_01023	0.74	+0.0
1,059,274	-		OHPLBJKB_01023	0.74	+0.4