Experiment: Xyloglucan from tamarind 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03665 and BACOVA_03666 are separated by 1 nucleotides BACOVA_03666 and BACOVA_03667 are separated by 187 nucleotides
BACOVA_03665: BACOVA_03665 - putative DNA polymerase III, delta, at 502,911 to 504,035
_03665
BACOVA_03666: BACOVA_03666 - methylenetetrahydrofolate reductase (NAD(P)H), at 504,037 to 504,990
_03666
BACOVA_03667: BACOVA_03667 - ferritin-like protein, at 505,178 to 505,690
_03667
Position (kb) 504
505 Strain fitness (log2 ratio) -2
-1
0
1
2 at 504.036 kb on - strand at 504.042 kb on - strand at 504.339 kb on - strand, within BACOVA_03666 at 504.471 kb on - strand, within BACOVA_03666 at 504.471 kb on - strand, within BACOVA_03666 at 504.535 kb on - strand, within BACOVA_03666 at 504.538 kb on - strand, within BACOVA_03666 at 504.668 kb on - strand, within BACOVA_03666 at 504.672 kb on - strand, within BACOVA_03666 at 504.727 kb on - strand, within BACOVA_03666 at 504.727 kb on - strand, within BACOVA_03666 at 504.727 kb on - strand, within BACOVA_03666 at 504.856 kb on - strand, within BACOVA_03666 at 504.858 kb on - strand, within BACOVA_03666 at 504.858 kb on - strand, within BACOVA_03666 at 504.961 kb on - strand at 504.961 kb on - strand at 504.967 kb on - strand at 504.967 kb on - strand at 504.988 kb on - strand at 505.011 kb on - strand at 505.104 kb on - strand at 505.106 kb on + strand at 505.107 kb on - strand at 505.110 kb on - strand at 505.110 kb on - strand at 505.110 kb on - strand at 505.125 kb on + strand at 505.132 kb on + strand at 505.268 kb on - strand, within BACOVA_03667 at 505.268 kb on - strand, within BACOVA_03667 at 505.268 kb on - strand, within BACOVA_03667 at 505.309 kb on + strand, within BACOVA_03667 at 505.310 kb on - strand, within BACOVA_03667 at 505.363 kb on + strand, within BACOVA_03667 at 505.364 kb on - strand, within BACOVA_03667 at 505.407 kb on + strand, within BACOVA_03667 at 505.408 kb on - strand, within BACOVA_03667 at 505.501 kb on + strand, within BACOVA_03667 at 505.539 kb on - strand, within BACOVA_03667 at 505.590 kb on + strand, within BACOVA_03667 at 505.590 kb on + strand, within BACOVA_03667 at 505.590 kb on + strand, within BACOVA_03667 at 505.594 kb on - strand, within BACOVA_03667 at 505.646 kb on + strand at 505.653 kb on - strand at 505.657 kb on + strand at 505.696 kb on + strand at 505.703 kb on + strand at 505.709 kb on - strand at 505.712 kb on - strand at 505.725 kb on + strand at 505.725 kb on + strand at 505.725 kb on + strand at 505.833 kb on + strand at 505.917 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xyloglucan from tamarind 2.5 mg/mL (C) remove 504,036 - -0.3 504,042 - +0.7 504,339 - BACOVA_03666 0.32 +1.6 504,471 - BACOVA_03666 0.45 +1.4 504,471 - BACOVA_03666 0.45 +2.2 504,535 - BACOVA_03666 0.52 -0.8 504,538 - BACOVA_03666 0.53 +0.6 504,668 - BACOVA_03666 0.66 +1.3 504,672 - BACOVA_03666 0.67 +1.3 504,727 - BACOVA_03666 0.72 +1.6 504,727 - BACOVA_03666 0.72 +1.1 504,727 - BACOVA_03666 0.72 +0.5 504,856 - BACOVA_03666 0.86 +1.1 504,858 - BACOVA_03666 0.86 +1.4 504,858 - BACOVA_03666 0.86 +0.9 504,961 - +0.4 504,961 - +0.3 504,967 - +0.5 504,967 - +0.6 504,988 - +1.2 505,011 - -0.6 505,104 - -0.6 505,106 + +0.3 505,107 - -0.3 505,110 - -2.7 505,110 - +0.8 505,110 - -0.7 505,125 + +0.5 505,132 + +0.7 505,268 - BACOVA_03667 0.18 -1.4 505,268 - BACOVA_03667 0.18 +0.1 505,268 - BACOVA_03667 0.18 -1.4 505,309 + BACOVA_03667 0.26 +0.5 505,310 - BACOVA_03667 0.26 -0.6 505,363 + BACOVA_03667 0.36 -0.6 505,364 - BACOVA_03667 0.36 +0.7 505,407 + BACOVA_03667 0.45 -0.1 505,408 - BACOVA_03667 0.45 -0.2 505,501 + BACOVA_03667 0.63 -0.0 505,539 - BACOVA_03667 0.70 -0.1 505,590 + BACOVA_03667 0.80 +1.6 505,590 + BACOVA_03667 0.80 +0.6 505,590 + BACOVA_03667 0.80 -0.4 505,594 - BACOVA_03667 0.81 +0.3 505,646 + +0.4 505,653 - +0.4 505,657 + +0.7 505,696 + -0.9 505,703 + -0.0 505,709 - +1.0 505,712 - +0.5 505,725 + -1.3 505,725 + -0.4 505,725 + +0.2 505,833 + -0.7 505,917 + +0.3
Or see this region's nucleotide sequence