Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01128

Experiment: lim MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	lim MOI1
1,154,090	-		OHPLBJKB_01126	0.76	+1.1
1,154,090	-		OHPLBJKB_01126	0.76	+0.9
1,154,122	+		OHPLBJKB_01126	0.80	+0.8
1,154,122	+		OHPLBJKB_01126	0.80	-0.7
1,154,145	+		OHPLBJKB_01126	0.84	-0.2
1,154,146	-		OHPLBJKB_01126	0.84	+0.5
1,154,150	-		OHPLBJKB_01126	0.84	-0.7
1,154,191	+				-0.4
1,154,202	+				+0.0
1,154,203	-				-0.5
1,154,203	-				-0.3
1,154,292	+				+0.0
1,154,292	+				-0.9
1,154,402	+				-0.1
1,154,414	-				-0.1
1,154,448	-				+0.2
1,154,477	+				-0.6
1,154,477	+				+0.3
1,154,477	+				-0.2
1,154,478	-				-1.0
1,154,479	+				+0.4
1,154,479	+				+0.6
1,154,479	+				-0.4
1,154,479	+				+0.6
1,154,479	+				+0.0
1,154,479	+				-0.6
1,154,479	+				-0.5
1,154,479	+				+0.4
1,154,479	+				+0.5
1,154,479	+				+0.6
1,154,479	+				+0.0
1,154,479	+				+0.3
1,154,479	+				-0.6
1,154,479	+				-1.0
1,154,479	+				+0.5
1,154,479	+				-0.2
1,154,479	+				-0.5
1,154,479	+				-0.9
1,154,479	+				+0.0
1,154,479	+				+1.1
1,154,479	+				-0.3
1,154,479	+				-0.3
1,154,479	+				-0.3
1,154,479	+				+1.3
1,154,479	+				-0.3
1,154,479	+				+0.1
1,154,479	+				+0.3
1,154,479	+				+0.5
1,154,479	+				-0.2
1,154,479	+				+0.4
1,154,479	+				+1.2
1,154,479	+				-0.1
1,154,479	+				-0.3
1,154,479	+				-0.3
1,154,479	+				+0.1
1,154,479	+				-0.9
1,154,479	+				-0.9
1,154,479	+				-0.1
1,154,479	+				-0.0
1,154,479	+				-0.4
1,154,479	+				-0.7
1,154,479	+				+1.7
1,154,479	+				+0.3
1,154,479	+				-1.2
1,154,479	+				-0.4
1,154,479	+				-0.0
1,154,479	+				+0.4
1,154,479	+				+0.4
1,154,480	-				+0.4
1,154,480	-				-0.8
1,154,480	-				-0.2
1,154,480	-				-1.0
1,154,480	-				-0.4
1,154,480	-				+1.6
1,154,480	-				-2.1
1,154,480	-				+1.3
1,154,480	-				+0.5
1,154,480	-				-0.9
1,154,480	-				+0.7
1,154,480	-				-0.4
1,154,480	-				-0.4
1,154,480	-				-0.3
1,154,480	-				-0.3
1,154,480	-				+0.0
1,154,480	-				-0.7
1,154,480	-				-1.3
1,154,480	-				-1.2
1,154,480	-				+0.2
1,154,480	-				+1.4
1,154,480	-				-0.2
1,154,480	-				-0.1
1,154,480	-				+0.8
1,154,480	-				+0.5
1,154,480	-				+0.0
1,154,480	-				+0.2
1,154,480	-				+0.1
1,154,480	-				+1.2
1,154,480	-				-0.6
1,154,480	-				-0.5
1,154,480	-				-0.6
1,154,480	-				+0.0
1,154,481	+				-1.1
1,154,481	+				+1.6
1,154,481	+				-0.3
1,154,481	+				-1.0
1,154,481	+				+0.0
1,154,481	+				-2.2
1,154,482	-				-0.4
1,154,482	-				-0.6
1,154,482	-				-0.4
1,154,482	-				+0.3
1,154,483	+				-0.4
1,154,483	+				+0.0
1,154,483	+				+2.2
1,154,484	-				+1.2
1,154,484	-				+0.7
1,154,484	-				-1.3
1,154,484	-				+0.7
1,154,567	+				-0.7
1,154,583	-				+0.7
1,154,585	+				-0.6
1,154,586	-				+0.5
1,154,586	-				+0.4
1,154,586	-				-1.4
1,154,822	+		OHPLBJKB_01127	0.68	-0.5
1,154,823	-		OHPLBJKB_01127	0.68	-0.8
1,154,838	+		OHPLBJKB_01127	0.72	-0.2
1,154,882	+		OHPLBJKB_01127	0.83	+0.4
1,154,882	+		OHPLBJKB_01127	0.83	+0.5
1,154,924	+				+0.2
1,154,950	+				-0.1
1,154,951	-				+0.3
1,154,951	-				-0.7
1,154,951	-				-0.4
1,154,954	+				-0.7
1,154,954	+				+0.3
1,154,955	-				+1.4
1,154,955	-				+0.5
1,154,962	+				-0.6
1,154,962	+				+0.4
1,154,963	-				+0.8
1,154,965	+				-0.0
1,154,966	-				+0.9
1,154,966	-				+0.4
1,155,026	+				+0.6
1,155,027	-				+0.1
1,155,051	+				+0.0
1,155,051	+				+0.3
1,155,055	+				+0.1
1,155,055	+				-0.7
1,155,055	+				+0.8
1,155,056	-				+0.3
1,155,069	-		OHPLBJKB_01128	0.12	+0.7
1,155,222	-		OHPLBJKB_01128	0.38	+0.1
1,155,222	-		OHPLBJKB_01128	0.38	-1.3
1,155,342	+		OHPLBJKB_01128	0.58	-0.6
1,155,342	+		OHPLBJKB_01128	0.58	+1.6
1,155,343	-		OHPLBJKB_01128	0.58	-0.6
1,155,343	-		OHPLBJKB_01128	0.58	+0.3
1,155,343	-		OHPLBJKB_01128	0.58	-0.8
1,155,343	-		OHPLBJKB_01128	0.58	+0.5
1,155,344	+		OHPLBJKB_01128	0.58	-0.0
1,155,344	+		OHPLBJKB_01128	0.58	+0.1
1,155,344	+		OHPLBJKB_01128	0.58	-0.3
1,155,344	+		OHPLBJKB_01128	0.58	+0.8
1,155,344	+		OHPLBJKB_01128	0.58	+0.7
1,155,344	+		OHPLBJKB_01128	0.58	+1.2
1,155,344	+		OHPLBJKB_01128	0.58	-0.4
1,155,345	-		OHPLBJKB_01128	0.59	+0.8
1,155,345	-		OHPLBJKB_01128	0.59	+0.3
1,155,345	-		OHPLBJKB_01128	0.59	+0.3
1,155,345	-		OHPLBJKB_01128	0.59	-0.3
1,155,345	-		OHPLBJKB_01128	0.59	+0.4
1,155,345	-		OHPLBJKB_01128	0.59	+0.5
1,155,345	-		OHPLBJKB_01128	0.59	-0.4
1,155,424	+		OHPLBJKB_01128	0.72	+0.8
1,155,495	+		OHPLBJKB_01128	0.84	-0.7
1,155,495	+		OHPLBJKB_01128	0.84	+0.7
1,155,495	+		OHPLBJKB_01128	0.84	+0.2
1,155,505	-		OHPLBJKB_01128	0.86	-0.3
1,155,538	-				-0.3
1,155,555	-				+0.0
1,155,555	-				+0.3
1,155,571	+				-1.3
1,155,571	+				-0.4
1,155,571	+				+0.7
1,155,572	-				+0.3
1,155,618	-				-2.2
1,155,618	-				-0.8
1,155,708	+				+0.3
1,155,712	-				-0.1
1,155,771	+				+0.3
1,155,771	+				-0.1
1,155,772	-				-1.1
1,155,831	-		OHPLBJKB_01129	0.16	-0.4
1,155,831	-		OHPLBJKB_01129	0.16	-1.1
1,155,831	-		OHPLBJKB_01129	0.16	+0.0
1,155,895	+		OHPLBJKB_01129	0.23	-0.5
1,155,895	+		OHPLBJKB_01129	0.23	-0.0
1,155,896	-		OHPLBJKB_01129	0.23	+0.8
1,155,896	-		OHPLBJKB_01129	0.23	-0.7
1,155,919	-		OHPLBJKB_01129	0.26	+0.3
1,156,075	+		OHPLBJKB_01129	0.44	+0.5
1,156,076	-		OHPLBJKB_01129	0.44	+0.8
1,156,076	-		OHPLBJKB_01129	0.44	+0.6
1,156,127	-		OHPLBJKB_01129	0.49	-0.6
1,156,127	-		OHPLBJKB_01129	0.49	-0.5
1,156,221	+		OHPLBJKB_01129	0.60	+0.2
1,156,239	+		OHPLBJKB_01129	0.62	-1.3
1,156,239	+		OHPLBJKB_01129	0.62	-0.1
1,156,240	-		OHPLBJKB_01129	0.62	-0.7
1,156,240	-		OHPLBJKB_01129	0.62	+0.4
1,156,240	-		OHPLBJKB_01129	0.62	-0.1
1,156,249	-		OHPLBJKB_01129	0.63	+0.5
1,156,258	-		OHPLBJKB_01129	0.64	-0.2
1,156,290	-		OHPLBJKB_01129	0.68	-0.2
1,156,344	+		OHPLBJKB_01129	0.74	-0.1
1,156,344	+		OHPLBJKB_01129	0.74	-0.1
1,156,344	+		OHPLBJKB_01129	0.74	+0.9
1,156,344	+		OHPLBJKB_01129	0.74	-0.4
1,156,346	+		OHPLBJKB_01129	0.74	+0.3
1,156,346	+		OHPLBJKB_01129	0.74	-0.7
1,156,346	+		OHPLBJKB_01129	0.74	+0.6
1,156,346	+		OHPLBJKB_01129	0.74	+0.6
1,156,346	+		OHPLBJKB_01129	0.74	-0.7
1,156,346	+		OHPLBJKB_01129	0.74	+1.4
1,156,347	-		OHPLBJKB_01129	0.74	-0.4
1,156,347	-		OHPLBJKB_01129	0.74	-2.0
1,156,351	-		OHPLBJKB_01129	0.75	-1.0
1,156,396	+		OHPLBJKB_01129	0.80	-1.0
1,156,396	+		OHPLBJKB_01129	0.80	-0.0
1,156,396	+		OHPLBJKB_01129	0.80	-0.3
1,156,397	-		OHPLBJKB_01129	0.80	+0.4
1,156,397	-		OHPLBJKB_01129	0.80	-1.0
1,156,442	+		OHPLBJKB_01129	0.85	-0.1
1,156,443	-		OHPLBJKB_01129	0.85	-0.0
1,156,588	+				-0.1