Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05265

Experiment: Galactomannan from guar 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_05263 and BACOVA_05264 overlap by 4 nucleotidesBACOVA_05264 and BACOVA_05265 are separated by 135 nucleotidesBACOVA_05265 and BACOVA_05266 are separated by 83 nucleotides BACOVA_05263: BACOVA_05263 - putative iron-sulfur cluster-binding protein, at 756,807 to 758,192 _05263 BACOVA_05264: BACOVA_05264 - hypothetical protein, at 758,189 to 758,770 _05264 BACOVA_05265: BACOVA_05265 - putative pyridoxal kinase, at 758,906 to 759,778 _05265 BACOVA_05266: BACOVA_05266 - hypothetical protein, at 759,862 to 761,031 _05266 Position (kb) 758 759 760Strain fitness (log2 ratio) -2 -1 0 1 2at 757.964 kb on + strand, within BACOVA_05263at 757.964 kb on + strand, within BACOVA_05263at 758.072 kb on + strandat 758.080 kb on - strandat 758.208 kb on + strandat 758.209 kb on - strandat 758.249 kb on - strand, within BACOVA_05264at 758.295 kb on + strand, within BACOVA_05264at 758.343 kb on + strand, within BACOVA_05264at 758.343 kb on + strand, within BACOVA_05264at 758.344 kb on - strand, within BACOVA_05264at 758.344 kb on - strand, within BACOVA_05264at 758.376 kb on + strand, within BACOVA_05264at 758.377 kb on - strand, within BACOVA_05264at 758.388 kb on - strand, within BACOVA_05264at 758.398 kb on + strand, within BACOVA_05264at 758.491 kb on - strand, within BACOVA_05264at 758.508 kb on - strand, within BACOVA_05264at 758.560 kb on + strand, within BACOVA_05264at 758.623 kb on + strand, within BACOVA_05264at 758.623 kb on + strand, within BACOVA_05264at 758.630 kb on + strand, within BACOVA_05264at 758.631 kb on - strand, within BACOVA_05264at 758.751 kb on - strandat 758.768 kb on + strandat 758.769 kb on - strandat 758.769 kb on - strandat 758.769 kb on - strandat 758.790 kb on + strandat 758.796 kb on + strandat 758.804 kb on - strandat 758.838 kb on + strandat 758.838 kb on + strandat 758.839 kb on - strandat 758.839 kb on - strandat 758.843 kb on + strandat 758.848 kb on - strandat 758.881 kb on - strandat 758.905 kb on + strandat 758.906 kb on - strandat 758.906 kb on - strandat 758.906 kb on - strandat 758.909 kb on + strandat 758.909 kb on + strandat 758.910 kb on - strandat 758.918 kb on - strandat 759.001 kb on + strand, within BACOVA_05265at 759.037 kb on - strand, within BACOVA_05265at 759.037 kb on - strand, within BACOVA_05265at 759.050 kb on - strand, within BACOVA_05265at 759.103 kb on + strand, within BACOVA_05265at 759.129 kb on + strand, within BACOVA_05265at 759.142 kb on + strand, within BACOVA_05265at 759.146 kb on + strand, within BACOVA_05265at 759.196 kb on + strand, within BACOVA_05265at 759.272 kb on - strand, within BACOVA_05265at 759.297 kb on - strand, within BACOVA_05265at 759.352 kb on - strand, within BACOVA_05265at 759.357 kb on - strand, within BACOVA_05265at 759.374 kb on + strand, within BACOVA_05265at 759.374 kb on + strand, within BACOVA_05265at 759.374 kb on + strand, within BACOVA_05265at 759.485 kb on - strand, within BACOVA_05265at 759.497 kb on + strand, within BACOVA_05265at 759.503 kb on + strand, within BACOVA_05265at 759.503 kb on + strand, within BACOVA_05265at 759.503 kb on + strand, within BACOVA_05265at 759.506 kb on - strand, within BACOVA_05265at 759.546 kb on - strand, within BACOVA_05265at 759.583 kb on + strand, within BACOVA_05265at 759.583 kb on + strand, within BACOVA_05265at 759.583 kb on + strand, within BACOVA_05265at 759.584 kb on - strand, within BACOVA_05265at 759.584 kb on - strand, within BACOVA_05265at 759.636 kb on + strand, within BACOVA_05265at 759.636 kb on + strand, within BACOVA_05265at 759.637 kb on - strand, within BACOVA_05265at 759.637 kb on - strand, within BACOVA_05265at 759.692 kb on + strandat 759.692 kb on + strandat 759.693 kb on - strandat 759.726 kb on + strandat 759.765 kb on - strandat 759.812 kb on - strandat 759.854 kb on + strandat 759.857 kb on - strandat 759.857 kb on - strandat 759.861 kb on - strandat 759.899 kb on + strandat 759.962 kb on - strandat 759.962 kb on - strandat 759.963 kb on + strandat 759.963 kb on + strandat 759.964 kb on - strandat 759.987 kb on + strand, within BACOVA_05266at 759.987 kb on + strand, within BACOVA_05266at 759.988 kb on - strand, within BACOVA_05266at 760.014 kb on + strand, within BACOVA_05266at 760.018 kb on + strand, within BACOVA_05266at 760.060 kb on + strand, within BACOVA_05266at 760.060 kb on + strand, within BACOVA_05266at 760.131 kb on - strand, within BACOVA_05266at 760.212 kb on + strand, within BACOVA_05266at 760.232 kb on + strand, within BACOVA_05266at 760.233 kb on - strand, within BACOVA_05266at 760.236 kb on - strand, within BACOVA_05266at 760.265 kb on + strand, within BACOVA_05266at 760.357 kb on + strand, within BACOVA_05266at 760.357 kb on + strand, within BACOVA_05266at 760.357 kb on + strand, within BACOVA_05266at 760.358 kb on - strand, within BACOVA_05266at 760.388 kb on - strand, within BACOVA_05266at 760.388 kb on - strand, within BACOVA_05266at 760.394 kb on + strand, within BACOVA_05266at 760.446 kb on + strand, within BACOVA_05266at 760.452 kb on + strand, within BACOVA_05266at 760.466 kb on + strand, within BACOVA_05266at 760.467 kb on - strand, within BACOVA_05266at 760.467 kb on - strand, within BACOVA_05266at 760.468 kb on + strand, within BACOVA_05266at 760.469 kb on - strand, within BACOVA_05266at 760.473 kb on + strand, within BACOVA_05266at 760.555 kb on + strand, within BACOVA_05266at 760.634 kb on - strand, within BACOVA_05266at 760.668 kb on + strand, within BACOVA_05266at 760.668 kb on + strand, within BACOVA_05266at 760.669 kb on - strand, within BACOVA_05266at 760.679 kb on + strand, within BACOVA_05266at 760.690 kb on + strand, within BACOVA_05266at 760.698 kb on - strand, within BACOVA_05266at 760.734 kb on + strand, within BACOVA_05266at 760.735 kb on - strand, within BACOVA_05266at 760.746 kb on + strand, within BACOVA_05266

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Per-strain Table

Position Strand Gene LocusTag Fraction Galactomannan from guar 2.5 mg/mL (C)
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757,964 + BACOVA_05263 0.83 -0.1
757,964 + BACOVA_05263 0.83 +0.3
758,072 + +0.4
758,080 - +0.3
758,208 + -0.7
758,209 - +0.6
758,249 - BACOVA_05264 0.10 +0.4
758,295 + BACOVA_05264 0.18 +0.9
758,343 + BACOVA_05264 0.26 +0.9
758,343 + BACOVA_05264 0.26 -0.6
758,344 - BACOVA_05264 0.27 +0.9
758,344 - BACOVA_05264 0.27 -0.9
758,376 + BACOVA_05264 0.32 +0.6
758,377 - BACOVA_05264 0.32 -0.1
758,388 - BACOVA_05264 0.34 -0.9
758,398 + BACOVA_05264 0.36 -0.4
758,491 - BACOVA_05264 0.52 +2.0
758,508 - BACOVA_05264 0.55 -0.8
758,560 + BACOVA_05264 0.64 -0.2
758,623 + BACOVA_05264 0.75 +1.0
758,623 + BACOVA_05264 0.75 +1.1
758,630 + BACOVA_05264 0.76 +0.5
758,631 - BACOVA_05264 0.76 +1.3
758,751 - +0.6
758,768 + +0.5
758,769 - -0.4
758,769 - -0.6
758,769 - +1.4
758,790 + -0.8
758,796 + +0.7
758,804 - -1.2
758,838 + +0.2
758,838 + -0.3
758,839 - +0.3
758,839 - +0.5
758,843 + +0.4
758,848 - -0.5
758,881 - -0.5
758,905 + -0.4
758,906 - +0.4
758,906 - -0.2
758,906 - -1.5
758,909 + +0.9
758,909 + +0.0
758,910 - +0.1
758,918 - -0.2
759,001 + BACOVA_05265 0.11 +0.5
759,037 - BACOVA_05265 0.15 +0.4
759,037 - BACOVA_05265 0.15 -1.2
759,050 - BACOVA_05265 0.16 +0.1
759,103 + BACOVA_05265 0.23 +0.4
759,129 + BACOVA_05265 0.26 -0.6
759,142 + BACOVA_05265 0.27 -2.1
759,146 + BACOVA_05265 0.27 +0.8
759,196 + BACOVA_05265 0.33 +0.3
759,272 - BACOVA_05265 0.42 +1.6
759,297 - BACOVA_05265 0.45 +0.1
759,352 - BACOVA_05265 0.51 +0.8
759,357 - BACOVA_05265 0.52 -0.2
759,374 + BACOVA_05265 0.54 -0.8
759,374 + BACOVA_05265 0.54 +0.8
759,374 + BACOVA_05265 0.54 +0.9
759,485 - BACOVA_05265 0.66 +1.0
759,497 + BACOVA_05265 0.68 -0.7
759,503 + BACOVA_05265 0.68 +0.5
759,503 + BACOVA_05265 0.68 +1.1
759,503 + BACOVA_05265 0.68 +0.8
759,506 - BACOVA_05265 0.69 -0.6
759,546 - BACOVA_05265 0.73 +0.3
759,583 + BACOVA_05265 0.78 +0.3
759,583 + BACOVA_05265 0.78 +0.3
759,583 + BACOVA_05265 0.78 -0.2
759,584 - BACOVA_05265 0.78 -1.5
759,584 - BACOVA_05265 0.78 +0.5
759,636 + BACOVA_05265 0.84 -0.4
759,636 + BACOVA_05265 0.84 -1.2
759,637 - BACOVA_05265 0.84 -0.1
759,637 - BACOVA_05265 0.84 +1.4
759,692 + -1.2
759,692 + +1.2
759,693 - +0.2
759,726 + -1.0
759,765 - +0.4
759,812 - -1.1
759,854 + +1.6
759,857 - +0.0
759,857 - +0.7
759,861 - +0.0
759,899 + +1.5
759,962 - +0.1
759,962 - -0.0
759,963 + -0.0
759,963 + +0.7
759,964 - +0.1
759,987 + BACOVA_05266 0.11 +0.8
759,987 + BACOVA_05266 0.11 -1.6
759,988 - BACOVA_05266 0.11 +0.3
760,014 + BACOVA_05266 0.13 +0.3
760,018 + BACOVA_05266 0.13 +0.8
760,060 + BACOVA_05266 0.17 +0.6
760,060 + BACOVA_05266 0.17 +0.3
760,131 - BACOVA_05266 0.23 +0.8
760,212 + BACOVA_05266 0.30 +0.2
760,232 + BACOVA_05266 0.32 -0.5
760,233 - BACOVA_05266 0.32 +0.4
760,236 - BACOVA_05266 0.32 +0.3
760,265 + BACOVA_05266 0.34 +1.8
760,357 + BACOVA_05266 0.42 +0.9
760,357 + BACOVA_05266 0.42 +0.5
760,357 + BACOVA_05266 0.42 -0.6
760,358 - BACOVA_05266 0.42 +0.4
760,388 - BACOVA_05266 0.45 +1.3
760,388 - BACOVA_05266 0.45 -0.5
760,394 + BACOVA_05266 0.45 +1.1
760,446 + BACOVA_05266 0.50 -0.8
760,452 + BACOVA_05266 0.50 +0.4
760,466 + BACOVA_05266 0.52 +0.6
760,467 - BACOVA_05266 0.52 +0.3
760,467 - BACOVA_05266 0.52 +0.3
760,468 + BACOVA_05266 0.52 -1.7
760,469 - BACOVA_05266 0.52 -0.4
760,473 + BACOVA_05266 0.52 +0.5
760,555 + BACOVA_05266 0.59 -0.1
760,634 - BACOVA_05266 0.66 -0.7
760,668 + BACOVA_05266 0.69 +0.4
760,668 + BACOVA_05266 0.69 +1.0
760,669 - BACOVA_05266 0.69 +0.4
760,679 + BACOVA_05266 0.70 -0.9
760,690 + BACOVA_05266 0.71 -2.0
760,698 - BACOVA_05266 0.71 +1.0
760,734 + BACOVA_05266 0.75 +0.4
760,735 - BACOVA_05266 0.75 +1.4
760,746 + BACOVA_05266 0.76 -1.7

Or see this region's nucleotide sequence