Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05207

Experiment: Galactomannan from guar 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_05206 and BACOVA_05207 are separated by 9 nucleotidesBACOVA_05207 and BACOVA_05208 overlap by 14 nucleotidesBACOVA_05208 and BACOVA_05209 are separated by 5 nucleotides BACOVA_05206: BACOVA_05206 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 708,743 to 709,837 _05206 BACOVA_05207: BACOVA_05207 - Sigma-54 interaction domain protein, at 709,847 to 711,088 _05207 BACOVA_05208: BACOVA_05208 - hypothetical protein, at 711,075 to 711,602 _05208 BACOVA_05209: BACOVA_05209 - hypothetical protein, at 711,608 to 712,381 _05209 Position (kb) 709 710 711 712Strain fitness (log2 ratio) -1 0 1at 708.909 kb on + strand, within BACOVA_05206at 709.192 kb on + strand, within BACOVA_05206at 709.514 kb on + strand, within BACOVA_05206at 709.781 kb on + strandat 709.824 kb on + strandat 711.605 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Galactomannan from guar 2.5 mg/mL (C)
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708,909 + BACOVA_05206 0.15 -0.3
709,192 + BACOVA_05206 0.41 -0.8
709,514 + BACOVA_05206 0.70 -1.0
709,781 + +0.7
709,824 + +0.7
711,605 + +0.0

Or see this region's nucleotide sequence